mRNA_P-wetherbeei_contig17473.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI) HSP 1 Score: 282 bits (721), Expect = 5.080e-88 Identity = 143/239 (59.83%), Postives = 180/239 (75.31%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASALGIDAGKQRQMLEARPAAERRAAGEAGAGGWQAAPASRADLFGSGAENPELDPGKLREAVQKEAAFQKKVG 717
+ FAGDNF+RY GDV++ A+T +FAWEAA+RGQE+HPVADPSQAE+L ++F++KK LK++QKQ ILDKYGG EH PDARL++GQTE+YVEYDRTGRVVKG P+A A+SKYEE+VFP+NHT+VWGSY+D+R RWGF+CCHS SYCTGE G+ ANDE+N S L +D +R+MLE R E E A R+DL+G G N +LD KL+EAV+K+ AF K G
Sbjct: 360 LVFAGDNFIRYTGDVREQARTSVFAWEAADRGQEVHPVADPSQAEMLRKKFDDKKTTLKEEQKQRILDKYGGSEHLDVPDARLLVGQTESYVEYDRTGRVVKGAPKAVAKSKYEENVFPSNHTSVWGSYFDKRSM-RWGFSCCHSLTFKSYCTGEEGKVANDEAN-SVLNVDLAGERKMLEGRKEGEASKVPEMTA---------RSDLYGEGTANVDLDEDKLKEAVKKQKAFLSKGG 587
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.270e-72 Identity = 128/242 (52.89%), Postives = 160/242 (66.12%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKP----DARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASALGIDAGKQRQMLEARPAAERRAAGEAGAGGWQAAPASRADLFGSGAENPELDPGKLREAVQKEAAFQKKV 714
+A+AGDNF+RYGG VK +A+TQ++AWEAA RGQELHPVADPSQAELLHRQFE +K LK DQ+ IL+KYGG + D RL +GQ+EAYVEYDR GRV+KG +A ARSKYEEDV P NH +VWGSYY+RR G RWGFACCH+ R +YCTG GR ANDE+N + AP +R++++G + NP LD KL+ A++KE FQ++
Sbjct: 323 LAYAGDNFMRYGGGVKDFARTQVYAWEAAARGQELHPVADPSQAELLHRQFEARKDALKGDQRTRILEKYGGXXXXAAGEGGIDPRLALGQSEAYVEYDRAGRVIKGAAQAVARSKYEEDVVPGNHASVWGSYYERRAG-RWGFACCHALSRAAYCTGAAGRAANDEANDAVAXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXAPTARSEVYGESSLNPVLDEEKLKAALRKEEEFQRRA 560
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: UPI000A2A9B4F (pre-mRNA-splicing factor SLU7 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9B4F) HSP 1 Score: 208 bits (530), Expect = 1.180e-60 Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASAL 507
V +AGDNFVRY GD K AQTQ+FAWEA E+G ++H DP++ ELLH++++ KK ++++KQ +L+KYGGEEH P L++ QTE YVEY RTGR+VKG +A +SKYEEDV+P+NHT+VWGSY+ G WG+ACCHS V+NSYCTGE G+ A ++ N L
Sbjct: 270 VTYAGDNFVRYSGDTSKMAQTQLFAWEAYEKGADVHLQVDPTKLELLHKEYKVKKGDFEEEKKQTVLEKYGGEEHLEAPPKELLLAQTENYVEYSRTGRIVKGQEKAVMKSKYEEDVYPSNHTSVWGSYWHE---GNWGYACCHSXVKNSYCTGEAGKAAYNKQNLQPL 435
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: UPI00077B15E5 (pre-mRNA-splicing factor SLU7-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B15E5) HSP 1 Score: 202 bits (515), Expect = 1.580e-60 Identity = 90/161 (55.90%), Postives = 125/161 (77.64%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREAN 483
V +AGDNFVR+ GD +K AQ+Q+FAWEA E+G ++H ADP++ ELLH++++ KK + D+K +L+KYGGEEH + P L++ QTE YVE+ RTG+V++G +A A+SKYEEDV+ NNHT+VWGSY+ GRWG+ACCHS +RNSYCTG+ G+E +
Sbjct: 66 VTYAGDNFVRFSGDTQKMAQSQMFAWEAYEKGADVHLQADPTKLELLHKEYKVKKGDFEKDKKLSVLEKYGGEEHLNAPPKELLLAQTENYVEFSRTGKVIRGQEKAVAKSKYEEDVYTNNHTSVWGSYWQE---GRWGYACCHSFIRNSYCTGDAGKETS 223
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: K3X5L6_GLOUD (Pre-mRNA-splicing factor SLU7 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5L6_GLOUD) HSP 1 Score: 208 bits (530), Expect = 3.530e-60 Identity = 115/231 (49.78%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 7 FAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDES-NASALGIDAGKQRQMLEARPAAERRAAGEAGAGGWQAAPASRADLFGSGAENPELDPGKLREAVQKEA 696
+ GDN VR+ GD +K A Q+FAWEA +G ++HP+A+PSQAE L +QFEEKK L+ ++ + ILDKYGG++H P L++ QTE YVEY R GRVVKG+ RA +SKY EDVF NNHTA+WGS++DR WG++CCHS VR SYCTGE G++A + S N SA QRQML+ + E A + R+D++G NPELD KL++A++K A
Sbjct: 328 YLGDNVVRFTGDAQKLASAQLFAWEAYAKGTDIHPLANPSQAEFLKKQFEEKKAALEKEKSRKILDKYGGQQHLEAPPKELLLAQTEHYVEYSRDGRVVKGLERAPIKSKYVEDVFENNHTAIWGSWFDRSEMA-WGYSCCHSKVRKSYCTGEDGKKAIEASMNVSA-------QRQMLKPQARDENMAKDDGNV------LRKRSDMYGENI-NPELDDKKLKKALKKVA 543
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: A0A8H3TUG2_9TREE (Pre-mRNA-splicing factor SLU7 n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TUG2_9TREE) HSP 1 Score: 206 bits (525), Expect = 1.110e-59 Identity = 114/236 (48.31%), Postives = 148/236 (62.71%), Query Frame = 1
Query: 7 FAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASALGI-------DAGKQRQMLEARPAAERRAAGEAGAGGWQAAPASRADLFGSGAENPELDPGKLREAVQKE 693
FAGDNF+RY GD + Q+FAW++A RG ++H A+P+Q ELLH++F +KK++LKD K IL KYGGE+H K L+ GQTE YVEY RTG VV+G RA A+SKY+EDV NNHT+VWGS+Y+ G WGF CCHS V+ SYCTG G EAN ES+AS+L D ++ Q A E+ AAGE G + PA G + LD K++ A++ E
Sbjct: 288 FAGDNFLRYSGDATNIQKLQLFAWQSAARGNDVHMNANPTQGELLHKEFLDKKEQLKDTNKVSILAKYGGEQHLEKVPKELLTGQTENYVEYSRTGAVVRGQERAIAKSKYDEDVMINNHTSVWGSWYNLSTG-TWGFWCCHSTVKGSYCTGRAGIEANQESSASSLLXXXXAREQDRQERAQKSLAEQHLEKLAAGEKATGSSSSTPAFSKQRIGEQTDKVALDRNKVKAALEAE 522
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: A0A427YJ56_9TREE (Pre-mRNA-splicing factor SLU7 n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YJ56_9TREE) HSP 1 Score: 206 bits (525), Expect = 1.320e-59 Identity = 102/186 (54.84%), Postives = 131/186 (70.43%), Query Frame = 1
Query: 7 FAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASALGIDAGKQRQMLEARPAAER 564
FAGDNF+RY G+ + Q+FAW++++RG +H A+P+ ELLHR+F+EKK+ LKD K IL KYGGEEH + L+ GQTE YVEY RTG VKG RA ARSKY+EDV+ NNHTAVWGSY+DR WGFACCHS + SYCTGE G+EA S+ +AL +D+ +R+ ++ AER
Sbjct: 286 FAGDNFLRYSGEATNMQKLQMFAWQSSQRGHNVHAQANPTAGELLHREFQEKKEVLKDSSKVSILAKYGGEEHLERLPKELLSGQTENYVEYSRTGEAVKGRERAKARSKYDEDVYINNHTAVWGSYFDRDTA-LWGFACCHSLIAGSYCTGEAGKEATTSSSVTAL-LDSASERRRIDEEAEAER 469
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: UPI0009E1E56F (LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1E56F) HSP 1 Score: 201 bits (512), Expect = 3.760e-59 Identity = 93/158 (58.86%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGR 474
V + GDNFVR+ GD +K AQTQ+FAWEA E+G ++H ADP++ ELLH+++ KK + D+K ILDKYGGEEH + P L++ QTE YVEY RTG+V+KG +A +SKYEEDV+ NNHT+VWGSY+ G WG+ACCHS VRNSYCTGE G+
Sbjct: 253 VTYEGDNFVRFSGDTQKMAQTQMFAWEAYEKGADVHLQADPTKLELLHKEYRVKKGDFEQDKKLSILDKYGGEEHLNAPPKDLLLAQTEHYVEYSRTGKVIKGQDKAVVKSKYEEDVYTNNHTSVWGSYWQE---GSWGYACCHSFVRNSYCTGEAGK 407
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: A0A2B4RS23_STYPI (Pre-mRNA-splicing factor SLU7 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RS23_STYPI) HSP 1 Score: 204 bits (520), Expect = 3.790e-59 Identity = 94/165 (56.97%), Postives = 126/165 (76.36%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGVPRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESN 495
V ++GDNFVR+ GD +K AQTQ+FAWEA E+G ++H ADP++ ELLH++++ KK + D+K +L+KYGGEEH + P L++ QTE YVEY RTG+V+KG +A A+SKYEEDV+ NNHT+VWGSY+ GRWG+ACCHS VRNSYCTGE G+ ++ N
Sbjct: 276 VTYSGDNFVRFSGDTQKMAQTQLFAWEAYEKGADVHLQADPTKLELLHQEYKVKKGDFEQDKKITVLEKYGGEEHLNAPPKDLLLAQTEHYVEYSRTGKVIKGQEKAVAKSKYEEDVYTNNHTSVWGSYWQE---GRWGYACCHSFVRNSYCTGESGKASSATKN 437
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Match: A0A7S3HC70_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC70_9STRA) HSP 1 Score: 206 bits (523), Expect = 4.060e-59 Identity = 117/233 (50.21%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 1 VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQFEEKKKKLKDDQKQGILDKYGGEEHWSKPDARLVMGQTEAYVEYDRTGRVVKGV-PRATARSKYEEDVFPNNHTAVWGSYYDRRGGGRWGFACCHSAVRNSYCTGEGGREANDESNASALGIDAGKQRQMLEARPAAERRAAGEAGAGGWQAAPASRADLFG--SGAENPELDPGKLREAVQK 690
+AFAGDNF+RY GD K AQ Q+ WE RG+ + +++PSQAEL RQF EKK+KL++ +K +L KYG + D RL +GQTEAYVEY+R GRV+KG P AR+KY+EDVF NNHT+VWGSYY+R WG+ CCHS++RNSYCTG GR+AND +N+ A+ DA + R+ML++ P +RAA A A +A R+D+FG + A +D KL +A ++
Sbjct: 320 LAFAGDNFIRYSGDAIKLAQNQLLCWEMQARGENIDMMSNPSQAELTQRQFAEKKQKLEESKKAALLAKYGNGSAATPMDPRLRLGQTEAYVEYNREGRVIKGAAPVVVARTKYDEDVFVNNHTSVWGSYYNRARA-VWGYHCCHSSLRNSYCTGAKGRQANDAANSEAM--DAFQARKMLDSNP---KRAAEGASA----SALTKRSDIFGESNAASAGAIDATKLEKARRR 542 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17473.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17473.1.1 >prot_P-wetherbeei_contig17473.1.1 ID=prot_P-wetherbeei_contig17473.1.1|Name=mRNA_P-wetherbeei_contig17473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp VAFAGDNFVRYGGDVKKYAQTQIFAWEAAERGQELHPVADPSQAELLHRQback to top mRNA from alignment at P-wetherbeei_contig17473:2..1363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17473.1.1 ID=mRNA_P-wetherbeei_contig17473.1.1|Name=mRNA_P-wetherbeei_contig17473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1362bp|location=Sequence derived from alignment at P-wetherbeei_contig17473:2..1363+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17473:2..1363+ >mRNA_P-wetherbeei_contig17473.1.1 ID=mRNA_P-wetherbeei_contig17473.1.1|Name=mRNA_P-wetherbeei_contig17473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig17473:2..1363+ (Phaeothamnion wetherbeei SAG_119_79)back to top |