mRNA_P-wetherbeei_contig17447.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17447.1.1
Unique NamemRNA_P-wetherbeei_contig17447.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A835ZDH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH5_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.310e-67
Identity = 101/144 (70.14%), Postives = 125/144 (86.81%), Query Frame = 1 
Query:    1 SKVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            S+V KN++GGVLVT EEL+A FEFFDVDGRG +T++ +R+R+G F+K+M+PREY+FLMN K E+TL DL ELL+DN+V DFDPVAEAF  YDP GTG+VD EVLRTIFS LGFGD++NDD+ ILVEAAD DGDG+I+L+DFR M
Sbjct:   28 SEVPKNSKGGVLVTDEELRAVFEFFDVDGRGVITSTCIRKRMGAFYKNMNPREYKFLMNNKSEMTLNDLRELLVDNEVTDFDPVAEAFKAYDPDGTGYVDVEVLRTIFSNLGFGDINNDDLAILVEAADVDGDGQISLNDFRRM 171
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: F0YPY1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPY1_AURAN)

HSP 1 Score: 193 bits (490), Expect = 6.480e-61
Identity = 93/142 (65.49%), Postives = 117/142 (82.39%), Query Frame = 1 
Query:    7 VLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            V +N++GGVLVT+EELKAAF+FFDVD  GK+T  +LR+RLG F+K+M  +EYRFLMN K E+TLEDL ELLL+N+V +FDPVAEAF  YDP GTGFVD+ VLR+IF  LGFG++++DD+ IL E  D DGDG+I+L DFR M
Sbjct:    1 VPRNSKGGVLVTEEELKAAFDFFDVDSSGKITLGNLRKRLGVFYKNMPAKEYRFLMNNKSEMTLEDLKELLLENEVKNFDPVAEAFKVYDPDGTGFVDSNVLRSIFENLGFGEITDDDLTILTETGDVDGDGKISLMDFRKM 142
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A8J2SJG6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJG6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.030e-60
Identity = 93/142 (65.49%), Postives = 116/142 (81.69%), Query Frame = 1 
Query:    7 VLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            V +N+RGGVLVT EELK+AF+FFDV+G GK+T + L++RLG F+KDM  +EY+FLMN + ELTL+DL ELLLDN+V +FDPVAEAF  YDP+GTGFVDT VL+ IF  LGFG++S DD+ +L E  D DGDGRI+L DFR M
Sbjct:   16 VPRNSRGGVLVTDEELKSAFDFFDVEGSGKITQAQLKKRLGVFYKDMPNKEYKFLMNDQSELTLDDLRELLLDNEVKNFDPVAEAFKVYDPEGTGFVDTSVLKAIFENLGFGEISEDDLAVLTETGDVDGDGRISLMDFRKM 157
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: D8LKK8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK8_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.370e-60
Identity = 90/145 (62.07%), Postives = 120/145 (82.76%), Query Frame = 1 
Query:    1 SKVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSMC 435
            ++V KNA+GG+LV +EELKAAF+FFDV+G+G +TA +LR++LG F + +S RE R LMN K E+T++DL E+LL+N+V +FDPVAEAF  YDP  TGF+DTE+LR+IF  LGFG +S++D+ ILVEAADGDGDGR+ + DFR MC
Sbjct:    7 AQVPKNAKGGILVCEEELKAAFDFFDVEGKGVITAGALRKKLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVTNFDPVAEAFKAYDPSETGFMDTEILRSIFDNLGFGKMSDEDLAILVEAADGDGDGRVGVSDFREMC 151
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A7S2S2D3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.140e-60
Identity = 92/144 (63.89%), Postives = 121/144 (84.03%), Query Frame = 1 
Query:    1 SKVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            S V KNA GGVLVT++EL+AAF+FFD+DG G +TAS+L++RL  F+KDM  +EYRFLMN K  ++L+DL +LLLDN+V +FDPVAEAF  YDPQGTGFVDTEVLRT+F  LGFG++S++D+++LV+  D D DG+I+L DFR+M
Sbjct:   17 SAVPKNASGGVLVTEQELEAAFDFFDLDGTGTITASNLKKRLEVFYKDMPAKEYRFLMNNKAAMSLDDLKDLLLDNEVTNFDPVAEAFKVYDPQGTGFVDTEVLRTMFQDLGFGEVSDEDLQVLVQTGDADHDGKISLSDFRNM 160
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A7S2C3J7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3J7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.540e-60
Identity = 93/144 (64.58%), Postives = 120/144 (83.33%), Query Frame = 1 
Query:    1 SKVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            S V KN +GGVLVT +EL AAFEFFD+DG GK+T ++LR+RLG F+K+M  ++YRFLMN KPELTL+DL ELLLDN+V +FDPVAEAF  YDP+GTGFVD +VLR +F  LGFG+++++D++ILVE  D D DG+I+L DFR+M
Sbjct:   25 SSVPKNEKGGVLVTDDELAAAFEFFDMDGSGKITMTNLRKRLGVFYKNMPAKDYRFLMNNKPELTLQDLRELLLDNEVTNFDPVAEAFKVYDPEGTGFVDHKVLRDMFQNLGFGEVTDEDLQILVETGDVDQDGKISLSDFRNM 168
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A6V1U3T1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3T1_HETAK)

HSP 1 Score: 183 bits (465), Expect = 5.150e-56
Identity = 85/142 (59.86%), Postives = 113/142 (79.58%), Query Frame = 1 
Query:    7 VLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            + +N++GGVLVT+ E+KAAF+FFD+D  GK+T  +LR+RLG F+K+M  +EY+FLMN K E+TLEDL +LL+DN+V DFDPVAEAF  YDP   G +D E+LR IF GLGFGD++++D+ IL E AD + DGRI L+DFR M
Sbjct:   27 IRRNSKGGVLVTEAEIKAAFDFFDIDNEGKITLQNLRKRLGVFYKNMPTKEYKFLMNNKNEMTLEDLTDLLMDNEVKDFDPVAEAFKAYDPDSNGVIDPEMLRHIFQGLGFGDITDEDLEILTETADVNKDGRITLEDFRDM 168
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A485KGH9_9STRA (Aste57867_5213 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGH9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.770e-55
Identity = 83/142 (58.45%), Postives = 115/142 (80.99%), Query Frame = 1 
Query:    7 VLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            VL+NA+GGVLVT+E+++AAF+FFDVD +G +T  +L+ RLG F+KDM+ R+YR L+N + ELT + L +LLL+ND+AD+DP+AEAF  YDP+GTGFV  +VL  +F  LG+G LS++D+R+LV  AD D DG++NLDDFR M
Sbjct:   27 VLRNAKGGVLVTKEQIRAAFDFFDVDHKGSVTMENLKSRLGVFYKDMTTRDYRILLNNESELTEQALCDLLLENDIADYDPIAEAFRAYDPEGTGFVSFDVLSRLFENLGYGKLSDEDLRVLVATADADKDGKLNLDDFRHM 168
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: A0A6G0XJQ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJQ7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.220e-53
Identity = 82/143 (57.34%), Postives = 114/143 (79.72%), Query Frame = 1 
Query:    4 KVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            +VL+NA GGVL+T+E+++AAF+FFDV+ +G +T  +L+ RL  F+KDM+PR+YR L+N + ELT + L ELLL+ND+ADFDPVAEAF  YDP+GTGFV  +VL  +F  LG+G L++DD+R+LV  AD D DG+++L DFR M
Sbjct:   28 QVLRNAHGGVLITREQIRAAFDFFDVEHKGCITLDNLKSRLSLFYKDMTPRDYRVLLNNEGELTEQSLCELLLENDIADFDPVAEAFRAYDPEGTGFVSFDVLSRLFESLGYGKLNDDDLRVLVATADADKDGQLDLSDFRKM 170
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BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Match: W4FTS4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTS4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 8.520e-53
Identity = 82/143 (57.34%), Postives = 113/143 (79.02%), Query Frame = 1 
Query:    4 KVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMSPREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVDTEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSM 432
            +VL+N  GGVLVT+++++AAF+FFDV+  G +T  +L+ RLG F+KDMS R+YR L+N + ELT + L +LLL+ND+AD+DPVAEAF  YDP+GTGFV+ EVL  +F  LG+G LS+DD+R+LV  AD D DG++NL DFR +
Sbjct:   25 QVLRNENGGVLVTKDQIRAAFDFFDVEHNGVVTMDNLKSRLGVFYKDMSTRDYRVLLNNESELTEQTLCDLLLENDIADYDPVAEAFRAYDPEGTGFVNLEVLSRLFESLGYGKLSDDDLRVLVATADSDKDGQLNLADFRKL 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDH5_9STRA1.310e-6770.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YPY1_AURAN6.480e-6165.49Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2SJG6_9STRA1.030e-6065.49Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D8LKK8_ECTSI1.370e-6062.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S2D3_9STRA3.140e-6063.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C3J7_9STRA4.540e-6064.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1U3T1_HETAK5.150e-5659.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A485KGH9_9STRA4.770e-5558.45Aste57867_5213 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XJQ7_9STRA1.220e-5357.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FTS4_9STRA8.520e-5357.34Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17447contigP-wetherbeei_contig17447:99..533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LKK8
PFAMsEF-hand_7,EF-hand_8
Model size435
Max annot lvl2759|Eukaryota
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.25e-61
EggNOG OGs2BWVD@1|root,2S374@2759|Eukaryota
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-16_003330.1
Cds size435
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.904072-CDS-P-wetherbeei_contig17447:98..5331683186117.904072-CDS-P-wetherbeei_contig17447:98..533Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17447 99..533 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17447.1.1prot_P-wetherbeei_contig17447.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17447 99..533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17447.1.1

>prot_P-wetherbeei_contig17447.1.1 ID=prot_P-wetherbeei_contig17447.1.1|Name=mRNA_P-wetherbeei_contig17447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
SKVLKNARGGVLVTQEELKAAFEFFDVDGRGKLTASSLRRRLGCFFKDMS
PREYRFLMNGKPELTLEDLNELLLDNDVADFDPVAEAFATYDPQGTGFVD
TEVLRTIFSGLGFGDLSNDDMRILVEAADGDGDGRINLDDFRSMC
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mRNA from alignment at P-wetherbeei_contig17447:99..533+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17447.1.1 ID=mRNA_P-wetherbeei_contig17447.1.1|Name=mRNA_P-wetherbeei_contig17447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig17447:99..533+ (Phaeothamnion wetherbeei SAG_119_79)
TCGAAGGTGCTCAAGAATGCGAGGGGCGGCGTGCTCGTGACGCAGGAGGA
GCTCAAAGCGGCGTTTGAGTTCTTCGATGTTGACGGCCGAGGCAAGCTCA
CGGCGTCGTCGCTGCGACGACGTCTCGGCTGCTTCTTCAAGGACATGTCG
CCCCGCGAATACCGCTTCCTGATGAATGGCAAGCCCGAACTGACGCTGGA
GGACCTCAATGAACTGCTGCTCGACAACGACGTCGCCGATTTCGACCCCG
TTGCCGAGGCCTTCGCGACGTACGACCCGCAGGGCACGGGTTTCGTCGAC
ACGGAAGTGCTCCGAACCATCTTCAGCGGCCTCGGGTTCGGCGACCTAAG
CAACGATGACATGCGCATACTGGTCGAGGCCGCCGACGGCGACGGCGACG
GCCGCATCAACCTGGATGACTTTCGAAGCATGTGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17447:99..533+

>mRNA_P-wetherbeei_contig17447.1.1 ID=mRNA_P-wetherbeei_contig17447.1.1|Name=mRNA_P-wetherbeei_contig17447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig17447:99..533+ (Phaeothamnion wetherbeei SAG_119_79)
TCGAAGGTGCTCAAGAATGCGAGGGGCGGCGTGCTCGTGACGCAGGAGGA
GCTCAAAGCGGCGTTTGAGTTCTTCGATGTTGACGGCCGAGGCAAGCTCA
CGGCGTCGTCGCTGCGACGACGTCTCGGCTGCTTCTTCAAGGACATGTCG
CCCCGCGAATACCGCTTCCTGATGAATGGCAAGCCCGAACTGACGCTGGA
GGACCTCAATGAACTGCTGCTCGACAACGACGTCGCCGATTTCGACCCCG
TTGCCGAGGCCTTCGCGACGTACGACCCGCAGGGCACGGGTTTCGTCGAC
ACGGAAGTGCTCCGAACCATCTTCAGCGGCCTCGGGTTCGGCGACCTAAG
CAACGATGACATGCGCATACTGGTCGAGGCCGCCGACGGCGACGGCGACG
GCCGCATCAACCTGGATGACTTTCGAAGCATGTGT
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