mRNA_P-wetherbeei_contig17435.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17435.1.1
Unique NamemRNA_P-wetherbeei_contig17435.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7X8XMX3_9BURK (Flagellar biosynthetic protein FliR n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XMX3_9BURK)

HSP 1 Score: 250 bits (638), Expect = 6.250e-80
Identity = 136/257 (52.92%), Postives = 184/257 (71.60%), Query Frame = 1
Query:    1 GTGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMA-QFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMAP 768
            G GLL F RI++VFVQAPI+G+ H   PV  GMA+ +  +  P++P P + P     F+ A+L    VG +IG+VSFLVMAAAQFGGEMLDIQMGLS AA  DPASHGAVNLLR++HFY+AM L+L+++GHH L  ++  SF+++P+TYF I         T+ +A + I+L+S+L VIG QIA+PA+GALF+ Q ALG++AR APQMNVFM+SFP+N++IGL LLTL    ++ V+  QF  N   +  ++  M P
Sbjct:    9 GVGLLAFTRIVLVFVQAPIFGSHHIPKPVLAGMAVTMALVMYPHIPVPADMPQDLFPFIGALLTQACVGLLIGFVSFLVMAAAQFGGEMLDIQMGLSVAASFDPASHGAVNLLRKVHFYLAMNLWLVLDGHHALIRALEASFRVIPVTYFHI---------TSDIAFEMIRLTSNLLVIGTQIAAPALGALFITQCALGLLARVAPQMNVFMLSFPLNIAIGLALLTLSLPLIVRVLSVQFDANINHLVHSIKLMVP 256          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A355TRN3_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRN3_9BACT)

HSP 1 Score: 248 bits (633), Expect = 3.820e-79
Identity = 134/257 (52.14%), Postives = 181/257 (70.43%), Query Frame = 1
Query:    1 GTGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQ-FIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMAP 768
            G GLL F RI ++FVQAPI G+ H  + V +G A  +T    P +P P + P     F  A+L    VG VIG+VSF+V+AAAQFGGEMLDIQMGLS+AA  DPASHGA+NLLR++ FY +M LYL+++GHH+L  +IYKS+Q+VPLTYF          ++  +A   ++++SDL VIG QIA+PA+ ALF+AQ ALG++AR APQMN+FM+SFP+N++IGLILL L    +M VM  QF+ N + + + +  M P
Sbjct:   14 GVGLLAFVRIALIFVQAPILGSNHIPNTVLVGFAAAITVAIYPTLPVPNDMPTDLFPFFGAILTQACVGLVIGFVSFIVIAAAQFGGEMLDIQMGLSSAASFDPASHGAINLLRKVLFYTSMNLYLVLDGHHQLLAAIYKSYQVVPLTYFN---------MSENLAMTLLRMTSDLLVIGTQIAAPALAALFIAQCALGLLARVAPQMNIFMLSFPLNIAIGLILLRLSYPLIMRVMGNQFEINLDLLLQCIGMMKP 261          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7Z9PXS3_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PXS3_9BACT)

HSP 1 Score: 227 bits (579), Expect = 2.290e-70
Identity = 118/251 (47.01%), Postives = 176/251 (70.12%), Query Frame = 1
Query:    1 GTGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAV 753
            G GLL F RI  +F QAPI  ++H K  +++G+A  +  +  P +P PE FP     ++L +L  I VG  IG+VS+L MAAAQFGGEM+DIQMGLS AA  DP+S G   LL RL+FY+AMLLYL V+GHH+L  +++ SF+++PLT F++      G L   + +FI+ + ++++IGLQ+A+P + ALF+ QVA+G++AR APQMNVFM+SFPMN++IGL+L ++    +M +   QF+ N+++  + +
Sbjct:   10 GVGLLAFVRIAFIFQQAPILASKHIKPQMKVGLAGAMAVVAFPNLPMPEYFPEEPRAYILCILGQIVVGLAIGFVSYLCMAAAQFGGEMMDIQMGLSVAASMDPSSGGTSKLLMRLNFYVAMLLYLGVDGHHQLLRALFYSFRVIPLTEFRV-----SGNL---VLRFIEHTEEIFLIGLQVAAPPLAALFITQVAMGLLARVAPQMNVFMLSFPMNIAIGLMLFSIGLPMIMQLHLKQFEINQDRTIDVI 252          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A3D1Z1Z3_9ACTN (Flagellar biosynthetic protein FliR n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A3D1Z1Z3_9ACTN)

HSP 1 Score: 144 bits (364), Expect = 1.150e-38
Identity = 81/246 (32.93%), Postives = 148/246 (60.16%), Query Frame = 1
Query:    4 TGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQV 741
            T LL+  R+  VF  API+G+++    V++G+AL  + + LP++P   +  +    F L + + + VGA+IG+ + LV       G+++DIQMG       DP S+ +V+++ +    +A+L++L +NGHH L+ ++ KSF ++PLT F+      G  +T+    F+ + ++++VIGL+I  PA+G L +  +ALG++AR  PQMNVF+++ P+ +++G I +      ++  M   F +  EQ+
Sbjct:   18 TFLLVLTRVSGVFFLAPIFGSRNIPTQVKVGLALLTSLVVLPFIPSNVDPGMHMIDFALLLAKELTVGALIGFSATLVFMGFLLAGQIIDIQMGFGMVNVIDPLSNLSVSIMGQFKNLLAILVFLAINGHHFLFTALAKSFDVLPLTMFEF-----GPAITSH---FVGMVANMFVIGLKIGGPAIGVLLITDLALGIIARTVPQMNVFIVAMPLKITVGFIAIISMLSLLLIYMSQIFGQMPEQM 255          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A2M7T6B2_9ACTN (Flagellar biosynthetic protein FliR n=1 Tax=Candidatus Aquicultor secundus TaxID=1973895 RepID=A0A2M7T6B2_9ACTN)

HSP 1 Score: 141 bits (355), Expect = 2.250e-37
Identity = 80/239 (33.47%), Postives = 144/239 (60.25%), Query Frame = 1
Query:    4 TGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPE-NFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIG----LILLTLCSGWVMDV 705
            T LL+  R+  VF  AP+ G+++    V+IG+AL  +    P++P P+ +  +    F L + + + VGAVIG+ + LV       G+++D QMG S     DP S+ +V+++ + +  +A+L++L +NGH+ L  ++ KSF+IVPLT F I    PG         F+ +  ++++IGL++  PA+G LF+  +A+G+V+RA PQ+N+F++  P+ ++IG    + +L   S +V+ +
Sbjct:   13 TFLLILTRVSGVFFLAPVLGSRNIPTQVKIGLALMTSIALFPFIPSPQIDKSIDMINFTLLIAKELSVGAVIGFTANLVFMGFLLAGQIIDFQMGFSMVNVVDPLSNLSVSIMGQFNNLLAVLIFLAINGHYYLLTALAKSFEIVPLTTFAIT---PG-----VTENFLGMIVNMFIIGLKVGGPAIGVLFMTDLAMGLVSRAVPQINIFIVGMPLKIAIGFATVIAMLAFFSAYVVKI 243          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7X9BLL9_9FIRM (Flagellar biosynthetic protein FliR n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7X9BLL9_9FIRM)

HSP 1 Score: 138 bits (347), Expect = 3.310e-36
Identity = 81/223 (36.32%), Postives = 132/223 (59.19%), Query Frame = 1
Query:   10 LLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPV-SAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILL 675
            LL+F RI  +F+ API+ ++     V++ +AL + A+  P +  P    + S G FMLA+L  +  G  IG V++LV A  Q  G+++D+QMG       DP S   + L+   ++ +A+L+YL +NGHH L ++I++S+Q +P     +     G   T  + Q   L + ++VI L++A+P V A+F+A +ALG +AR  PQMNVF+I  P+ +  G I+L
Sbjct:    9 LLVFGRISGLFLSAPIYASRQIPAQVKVLLALTLAAMMSPTVSAPYKTAIDSTGMFMLALLVEMVTGYAIGLVAYLVFAGIQLAGQLIDMQMGFGIVNVVDPQSGTQLPLIGSFNYLLALLIYLGMNGHHWLLMAIHQSYQFIP-----VMGPNFGAGFTHYLMQ---LGAQMFVIALKVAAPIVAAIFIADIALGFMARTVPQMNVFLIGIPLKILAGFIML 223          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A4J751_DESRM (Flagellar biosynthetic protein FliR n=1 Tax=Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1) TaxID=349161 RepID=A4J751_DESRM)

HSP 1 Score: 136 bits (342), Expect = 1.880e-35
Identity = 79/240 (32.92%), Postives = 132/240 (55.00%), Query Frame = 1
Query:    4 TGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYM-PYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQF 720
            T  L+F R+L      P++        V+ G++L + A+  P + P   +FP    G  LAV   +GVG  IG V   V  A +  G++LD Q+G + AA  DP   G   L+ R  F+M ++LY+ ++GHH L  ++ KS+++VPLT      A   GELT  +   I++ +D + + +QI +P V  L +  +A+G++ + APQ+N+F + FP+ +++G+  L +    +  V KY F
Sbjct:    9 TFFLVFVRMLSFIFSCPLYAIPGIPPLVKAGLSLVLAALTAPLVEPAAASFPGGLWGLGLAVFSEVGVGLAIGLVCTFVFNAIRIAGQLLDFQIGFAMAAVMDPLGGGMNTLVSRFLFFMTLVLYMNMDGHHALIRALVKSYELVPLTA-----AAMNGELTLLI---IRIFTDTFALAVQICAPVVAVLVITDLAMGLIGKTAPQLNIFQLGFPLKIAVGVSTLAILLPALTSVFKYLF 240          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A2D5ZLC2_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZLC2_9BACT)

HSP 1 Score: 135 bits (339), Expect = 5.940e-35
Identity = 76/228 (33.33%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    1 GTGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLC 684
            G  +L+F R+  +   AP +G ++    VRIG+AL +  I  P +  P+        F+L  L+ I +G  +G+   +V AAAQF G +   QMGL+ A   DP    +++++    + +A+LL+L+ +GH  +  ++  SF++VP+  F +     GG     M   ++L+SDL+ + +Q+A+P + ALF   V LG++AR  PQMNVF++ FP+ + +G     LC
Sbjct:   12 GRFILVFMRLATLLALAPFYGFKNVSVRVRIGLALLIALILTPVVDVPDLEESPLSQFVLLGLKEIAIGGFLGFALSIVFAAAQFAGHIAGFQMGLAMANTVDPQGQVSLSVVGEFFYVLAVLLFLVFDGHLFVLKTVVHSFELVPVDAFSLN----GGA----MRHMVRLTSDLFGLAVQLAAPVIAALFATSVTLGLIARTVPQMNVFIVGFPIKIGLGFFACILC 231          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A6N8BKD1_9FIRM (Flagellar biosynthetic protein FliR n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N8BKD1_9FIRM)

HSP 1 Score: 134 bits (338), Expect = 7.370e-35
Identity = 76/224 (33.93%), Postives = 127/224 (56.70%), Query Frame = 1
Query:   10 LLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTL 681
            LL+  RI    V AP +  ++F    ++G+ALG+T + +P +P PE    S   F LA+ + + VG  +G++  L+ +A   GG+++DI++G  A+   DP +   V ++ R  F + +   L  N HH L   + KSF+ VP+T  Q   A+  G L      FI+  +D+ V+ L+IA+P +       V+LG+V R APQMN+FM+ FP+ + +G+  L++
Sbjct:   12 LLILVRISAFLVAAPFFSLKNFPTKAKVGLALGITVVLVPLVPAPETQFSSIVHFALAISKEVMVGLAMGFICTLIFSALSVGGQLIDIKIGFFASQMFDPMTGAQVTIISRFFFLLGIAFLLATNTHHDLIAILAKSFEAVPVT--QATAARELGLL------FIRAFADMMVLALKIAAPIMAVTLAIDVSLGLVGRTAPQMNIFMLGFPLKIVVGIFTLSI 227          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A0F2NAG9_9FIRM (Flagellar biosynthetic protein FliR n=1 Tax=Peptococcaceae bacterium BRH_c4a TaxID=1629716 RepID=A0A0F2NAG9_9FIRM)

HSP 1 Score: 134 bits (338), Expect = 7.750e-35
Identity = 76/246 (30.89%), Postives = 135/246 (54.88%), Query Frame = 1
Query:    4 TGLLMFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQV 741
            T LL+FARI    V AP++G Q+   PV+ GMA  ++ + LP +  P +      GFMLAV++ +GVG + G V  +++      G++ D+ +G   A+  DP S G V L  +  + +  +L+ +++GHH L   + +SFQI+PL          GG +   +  F ++ +    + +QI++P +  + +  V LG++ R APQMN+FM+ FP+ +  G++ L + +  +  V +  F+  E  +
Sbjct:    9 TFLLIFARIASFIVTAPVFGGQYTPGPVKAGMAFVISLVLLPLVTPPLHQMAGLLGFMLAVIREVGVGLLTGLVCHMILQILNILGQIFDMHVGFMMASFFDPTSGGQVTLTAKFLYLLGTILFFIIDGHHMLLFGMARSFQILPLDTAVFN----GGSIFIIIRAFARMVT----VAVQISAPIIAVVLIVDVCLGLLGRTAPQMNIFMLGFPVKIGAGILALAVLAPLLGMVFQSLFRMMERDL 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XMX3_9BURK6.250e-8052.92Flagellar biosynthetic protein FliR n=1 Tax=Burkho... [more]
A0A355TRN3_9BACT3.820e-7952.14Flagellar biosynthetic protein FliR n=1 Tax=bacter... [more]
A0A7Z9PXS3_9BACT2.290e-7047.01Flagellar biosynthetic protein FliR n=1 Tax=Phycis... [more]
A0A3D1Z1Z3_9ACTN1.150e-3832.93Flagellar biosynthetic protein FliR n=3 Tax=Actino... [more]
A0A2M7T6B2_9ACTN2.250e-3733.47Flagellar biosynthetic protein FliR n=1 Tax=Candid... [more]
A0A7X9BLL9_9FIRM3.310e-3636.32Flagellar biosynthetic protein FliR n=1 Tax=Syntro... [more]
A4J751_DESRM1.880e-3532.92Flagellar biosynthetic protein FliR n=1 Tax=Desulf... [more]
A0A2D5ZLC2_9BACT5.940e-3533.33Flagellar biosynthetic protein FliR n=1 Tax=Gemmat... [more]
A0A6N8BKD1_9FIRM7.370e-3533.93Flagellar biosynthetic protein FliR n=1 Tax=Firmic... [more]
A0A0F2NAG9_9FIRM7.750e-3530.89Flagellar biosynthetic protein FliR n=1 Tax=Peptoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17435contigP-wetherbeei_contig17435:294..1061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog349161.Dred_2394
Preferred namefliR
PFAMsBac_export_1
Model size768
Max annot lvl186801|Clostridia
KEGG koko:K02421
KEGG TC3.A.6.2
KEGG Pathwayko02040,map02040
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.09e-35
EggNOG OGsCOG1684@1|root,COG1684@2|Bacteria,1TRB2@1239|Firmicutes,24ECW@186801|Clostridia,262NX@186807|Peptococcaceae
DescriptionRole in flagellar biosynthesis
Cds size753
COG categoryN
BRITEko00000,ko00001,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.4659047-CDS-P-wetherbeei_contig17435:293..10461683186117.4659047-CDS-P-wetherbeei_contig17435:293..1046Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17435 294..1046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.4776905-UTR-P-wetherbeei_contig17435:1046..10611683186117.4776905-UTR-P-wetherbeei_contig17435:1046..1061Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17435 1047..1061 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17435.1.1prot_P-wetherbeei_contig17435.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17435 294..1046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17435.1.1

>prot_P-wetherbeei_contig17435.1.1 ID=prot_P-wetherbeei_contig17435.1.1|Name=mRNA_P-wetherbeei_contig17435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSA
GGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPA
SHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHA
QPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAP
QMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMA
P
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mRNA from alignment at P-wetherbeei_contig17435:294..1061-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17435.1.1 ID=mRNA_P-wetherbeei_contig17435.1.1|Name=mRNA_P-wetherbeei_contig17435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig17435:294..1061- (Phaeothamnion wetherbeei SAG_119_79)
GGCACGGGGCTGCTGATGTTTGCACGCATCCTGATGGTCTTCGTGCAGGC TCCTATTTGGGGTGCTCAGCACTTCAAGGACCCCGTGCGTATCGGCATGG CGCTGGGAGTCACGGCGATTTTCTTGCCGTATATGCCCTACCCGGAGAAT TTCCCCGTAAGCGCCGGCGGATTCATGCTGGCCGTGCTGCAAAACATCGG CGTAGGAGCCGTCATCGGCTGGGTTTCCTTCCTGGTGATGGCCGCGGCCC AGTTCGGCGGCGAAATGCTCGACATTCAGATGGGGCTGTCGGCCGCCGCA CAGTCTGACCCCGCCAGCCACGGCGCCGTCAACTTGCTCCGTCGCCTTCA CTTTTACATGGCCATGCTTTTGTATCTGATGGTCAATGGCCATCATCGCC TCTGGATCTCCATCTACAAGAGCTTTCAGATCGTGCCCCTGACCTATTTC CAGATTCAGCACGCTCAGCCGGGCGGCGAGCTGACGGCCCAGATGGCGCA GTTTATCAAGCTCTCTTCCGACCTTTACGTGATTGGGCTGCAAATCGCGT CTCCGGCGGTGGGAGCCCTCTTCGTGGCCCAGGTCGCCCTGGGTATGGTG GCACGAGCAGCCCCGCAGATGAATGTGTTCATGATCAGCTTCCCGATGAA CTTGAGTATCGGCTTGATTTTGCTGACGCTCTGCTCGGGCTGGGTCATGG ATGTTATGAAATACCAATTTCAAAGAAACGAAGAGCAGGTTGACGAAGCA GTCATCCGTATGGCGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17435:294..1061-

>mRNA_P-wetherbeei_contig17435.1.1 ID=mRNA_P-wetherbeei_contig17435.1.1|Name=mRNA_P-wetherbeei_contig17435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig17435:294..1061- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGCACGCATCCTGATGGTCTTCGTGCAGGCTCCTATTTGGGGTGC
TCAGCACTTCAAGGACCCCGTGCGTATCGGCATGGCGCTGGGAGTCACGG
CGATTTTCTTGCCGTATATGCCCTACCCGGAGAATTTCCCCGTAAGCGCC
GGCGGATTCATGCTGGCCGTGCTGCAAAACATCGGCGTAGGAGCCGTCAT
CGGCTGGGTTTCCTTCCTGGTGATGGCCGCGGCCCAGTTCGGCGGCGAAA
TGCTCGACATTCAGATGGGGCTGTCGGCCGCCGCACAGTCTGACCCCGCC
AGCCACGGCGCCGTCAACTTGCTCCGTCGCCTTCACTTTTACATGGCCAT
GCTTTTGTATCTGATGGTCAATGGCCATCATCGCCTCTGGATCTCCATCT
ACAAGAGCTTTCAGATCGTGCCCCTGACCTATTTCCAGATTCAGCACGCT
CAGCCGGGCGGCGAGCTGACGGCCCAGATGGCGCAGTTTATCAAGCTCTC
TTCCGACCTTTACGTGATTGGGCTGCAAATCGCGTCTCCGGCGGTGGGAG
CCCTCTTCGTGGCCCAGGTCGCCCTGGGTATGGTGGCACGAGCAGCCCCG
CAGATGAATGTGTTCATGATCAGCTTCCCGATGAACTTGAGTATCGGCTT
GATTTTGCTGACGCTCTGCTCGGGCTGGGTCATGGATGTTATGAAATACC
AATTTCAAAGAAACGAAGAGCAGGTTGACGAAGCAGTCATCCGTATGGCG
CCG
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