mRNA_P-wetherbeei_contig17403.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17403.2.1
Unique NamemRNA_P-wetherbeei_contig17403.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A6H5KD20_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD20_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 6.990e-61
Identity = 109/241 (45.23%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWR-GGHRAACRPVACDGGGDGXXXXXXXXXXSSAPQVSTDAAAGTA-AITAPKPTAAAALVAQLFPEFEIVVEPE 738
            VQLG + PLE   A  +LF+  DWH WDGGK GG P+WLNPRDLP P  + C  C  P+  L+Q+YCP+D    AFHR LYVFCC KA+C     V+ LRCQLPR+N FY +EP                  WGAKLC VCG    + C++C  A YCGREHQ  HW+ GGH+  C     D G              +A   +  + AGT  A T PK  A+A++    F EFE+ V PE
Sbjct:   36 VQLGTVLPLEGSLADSVLFKNVDWHDWDGGKAGGWPVWLNPRDLPAPQDMRCGECSQPLSFLVQLYCPLDHEDDAFHRCLYVFCCPKASCSNNSSVKALRCQLPRENEFYPYEPSHKASILAKQQKGSDPETWGAKLCCVCGQLAKSACSKCRIARYCGREHQTLHWKTGGHKKVC---TSDNG--------------TATVAARKSTAGTLHARTTPKTLASASV----FREFEVEVRPE 255          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A4D9CTI8_9STRA (MYND-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTI8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.670e-54
Identity = 104/251 (41.43%), Postives = 133/251 (52.99%), Query Frame = 1
Query:    7 EADEDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPV-----ACDGGGDGXXXXXXXXXXSSAPQVSTDAAAGTAAITA-PKPTAAAALVAQLFPEFEIVVEPER 741
            + D+ +QLGF+E L E     LLF+  DW  WDGGKVGG+PIWLNPRDLPP   + CP+C  P+  +LQIYCP+DE   AFHRALYVF C+K  C     V+ LRCQLPR+N F++ +P D              +A   + C VCG R D  C  C    YC  +HQ   W+ GH+  CR V     A +GGG               P  S +     A +   P  +     +   FPE+EIV+E ER
Sbjct:   98 DGDQGMQLGFVERLPEEMQNRLLFQDPDWRAWDGGKVGGKPIWLNPRDLPPQTLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGSVKALRCQLPRENSFFASDPRD---IWNNGGRGKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTHKHQKEGWKTGHKLDCRKVEREKLAPEGGGQ---ERDANLTSGDVPASSVNLPQANAPVLGRPADSGVKNALRSTFPEYEIVIEEER 342          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7S3HTG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTG5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.320e-53
Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 1
Query:   19 DVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVACDG 567
            DVQLGF++   +    + LF   DW  WDGGKVGG P+WLNP DLPP +A+ C  C  P+  L+QIYCPIDE+ +AFHRA+Y+FCC++  C++   V+ LR QLPR NPFY F+P  +             +A  A  CA+CGCRG   C++C +  YC + HQ  HWR      C  ++C G
Sbjct:   31 DVQLGFIDKTMQ----NELFGDRDWRNWDGGKVGGAPVWLNPADLPPTSAMQCVHCCDPLQFLMQIYCPIDEVDSAFHRAIYLFCCKRKDCLKQGSVKCLRSQLPRTNPFYCFDPAVEAPSSAG-------TAPRAPTCALCGCRGSLVCSQCKNVSYCSKAHQKDHWR------CHKLSCKG 196          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7S3HTH5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTH5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.850e-51
Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 1
Query:   19 DVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVACDG 567
            DVQLGF++   +    + LF   DW  WDGGKVGG P+WLNP DLPP +A+ C  C  P+  L+QIYCPIDE+ +AFHRA+Y+FCC++  C++   V+ LR QLPR NPFY F+P  +             +A  A  CA+CGCRG   C++C +  YC + HQ  HWR      C  ++C G
Sbjct:   31 DVQLGFIDKTMQ----NELFGDRDWRNWDGGKVGGAPVWLNPADLPPTSAMQCVHCCDPLQFLMQIYCPIDEVDSAFHRAIYLFCCKRKDCLKQGSVKCLRSQLPRTNPFYCFDPAVEAPSSAG-------TAPRAPTCALCGCRGSLVCSQCKNVSYCSKAHQKDHWR------CHKLSCKG 196          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: K3WP47_GLOUD (MYND-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP47_GLOUD)

HSP 1 Score: 159 bits (402), Expect = 1.350e-44
Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 1
Query:   16 EDVQLGFLEPLEEGAAGDLLFRCA-DWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHW-RGGHRAAC 546
            +DV+LGF+  +++  A  LL     DW  WDGGKVGG+P+WLNPR +P  A +AC  CG  +  LLQIYCP+D++  AFHR+LYVFCCR A C +    +V R QLP+ N  Y   P++               ++    C +C  R    C+ C  A YC +EHQ  HW RGGH+  C
Sbjct:   22 QDVELGFVARVQDADASTLLLHAQPDWSQWDGGKVGGKPVWLNPRTVPTAAQLACVECGHALSFLLQIYCPLDDVADAFHRSLYVFCCRHAGCSKQGNGKVFRAQLPQRNALY---PEESGVTHFEPPASDEMPSF----CVLCNQRAVFTCSACHVARYCSKEHQKDHWSRGGHKQDC 193          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A2D4CFA8_PYTIN (MYND-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFA8_PYTIN)

HSP 1 Score: 162 bits (411), Expect = 2.820e-44
Identity = 77/182 (42.31%), Postives = 98/182 (53.85%), Query Frame = 1
Query:   16 EDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVAC 561
            E V+LGF+  +E+     LL   +DW  WDGG VGG+P WLNP+ +P   A++C  C  P+  LLQIYCP+D+   AFHR+LYVFCCR+  C +    R  RCQLPR+N FY                          LC +CG R    C+ C  A YC +EHQ  HW  GH+  C   AC
Sbjct:   34 EGVELGFVAKVEQPVDAKLLHDSSDWGEWDGGLVGGKPRWLNPKAVPSNEALSCSACAKPLAFLLQIYCPLDDQPDAFHRSLYVFCCRQTGCAKQSQARAFRCQLPRENAFYPATSGVQDFVSTEQLPA---------LCVLCGQRASFTCSACKVAQYCSKEHQKDHWSHGHKTDC--AAC 204          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A8C6D6R5_MOSMO (Programmed cell death 2 n=2 Tax=Moschus moschiferus TaxID=68415 RepID=A0A8C6D6R5_MOSMO)

HSP 1 Score: 156 bits (395), Expect = 8.590e-44
Identity = 80/175 (45.71%), Postives = 97/175 (55.43%), Query Frame = 1
Query:   22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
             +LGF+E     AA     R   + +    KVGGRP WL+   LP P  +ACP CG PM  LLQ+Y P+     AFHR L++FCCR   C    G+RV R QLPR N FYS+EP  +                GA+LC VCGC G  RC+RC  AHYC +EHQ   WR GH+ AC
Sbjct:    9 AELGFVE-----AAPSWRLRSEQFPS----KVGGRPAWLSAAGLPGPPELACPLCGRPMAFLLQVYAPLSGRADAFHRCLFLFCCRTPPCCC--GLRVFRNQLPRRNDFYSYEPPSEDPPSETGESVYLQLKSGAQLCRVCGCSGPKRCSRCHKAHYCSKEHQSLDWRLGHKQAC 172          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7R9YC03_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC03_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.050e-43
Identity = 80/186 (43.01%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRG-------VRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWR-GGHRAACRPV 555
            V+LGF+EP+       LLF+  DW  WDGG  GG+P+WLNP   P  A + C  C  P+  LLQ+Y P+D++ TAFHRALYVFCCR   C++          +RVLRCQLPR N +Y   P++                  A  C VCGC    RC RC    YC + HQ+ HW  GGH+  C  V
Sbjct:   10 VELGFVEPVGSPDV-PLLFQQRDWRQWDGGLAGGKPVWLNPHAPPTAALLTCGICKEPLCFLLQVYAPLDDVETAFHRALYVFCCRNGRCLKQSAGTMHPGALRVLRCQLPRRNAWYPGSPEEGDDEELLDGQV-------APTCEVCGCGATKRCGRCKGPIYCSKAHQMDHWTFGGHKRECGKV 187          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A4X1VXJ3_PIG (MYND-type domain-containing protein n=3 Tax=Sus scrofa TaxID=9823 RepID=A0A4X1VXJ3_PIG)

HSP 1 Score: 154 bits (388), Expect = 1.020e-42
Identity = 79/175 (45.14%), Postives = 95/175 (54.29%), Query Frame = 1
Query:   22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
            V+LGF+E     AA     R   + +    KVGGRP WL+   LP P  +AC  CG P+  LLQ+Y P+     AFHR L++FCCR   C    G+RV R QLPR N FYSFEP  +                GA LC VCGC G   C+RC  AHYC +EHQ   WR GH+ AC
Sbjct:    9 VELGFVE-----AAPAWRLRSEQFPS----KVGGRPAWLSEAGLPGPTELACSLCGHPLAFLLQLYAPLPGRADAFHRGLFLFCCRTPPCCV--GLRVFRNQLPRRNDFYSFEPPSEDPPPETGESLSLQLKSGAHLCRVCGCLGPKTCSRCHQAHYCSKEHQALDWRSGHKQAC 172          
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: UPI001E1B617C (programmed cell death protein 2 isoform X1 n=1 Tax=Bubalus bubalis TaxID=89462 RepID=UPI001E1B617C)

HSP 1 Score: 157 bits (396), Expect = 1.760e-42
Identity = 80/175 (45.71%), Postives = 96/175 (54.86%), Query Frame = 1
Query:   22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
             +LGF+EP     A     R   + +    KVGGRP WL+   LP P  +ACP CG PM  LLQ+Y P+     AFHR L++FCCR   C    G+RV R QLPR N FYS+EP  +                GA LC VCGC G  RC+RC  AHYC +EHQ   WR GH+ AC
Sbjct:    9 AELGFVEP-----APSWRLRSEQFPS----KVGGRPAWLSAAGLPGPPELACPLCGRPMAFLLQVYAPLPGRADAFHRCLFLFCCRTPPCCC--GLRVFRNQLPRQNNFYSYEPPSEDPPSETGESVYLHLKSGAHLCRVCGCSGPKRCSRCHKAHYCSKEHQSLDWRLGHKQAC 172          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD20_9PHAE6.990e-6145.23MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9CTI8_9STRA1.670e-5441.43MYND-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S3HTG5_9STRA1.320e-5345.90Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3HTH5_9STRA1.850e-5145.90Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K3WP47_GLOUD1.350e-4443.02MYND-type domain-containing protein n=1 Tax=Globis... [more]
A0A2D4CFA8_PYTIN2.820e-4442.31MYND-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A8C6D6R5_MOSMO8.590e-4445.71Programmed cell death 2 n=2 Tax=Moschus moschiferu... [more]
A0A7R9YC03_9STRA3.050e-4343.01Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4X1VXJ3_PIG1.020e-4245.14MYND-type domain-containing protein n=3 Tax=Sus sc... [more]
UPI001E1B617C1.760e-4245.71programmed cell death protein 2 isoform X1 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17403contigP-wetherbeei_contig17403:543..1415 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G6U8
Preferred namePDCD2
PFAMsPDCD2_C,zf-MYND
Model size741
Max annot lvl2759|Eukaryota
KEGG koko:K14801
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006417,GO:0006725,GO:0006807,GO:0006915,GO:0006919,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008283,GO:0008284,GO:0009790,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010608,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0016070,GO:0016072,GO:0017145,GO:0019222,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022613,GO:0030097,GO:0030154,GO:0030162,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0034248,GO:0034470,GO:0034641,GO:0034660,GO:0035162,GO:0042127,GO:0042254,GO:0042274,GO:0042981,GO:0043021,GO:0043024,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043280,GO:0043281,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0044703,GO:0044877,GO:0045595,GO:0045862,GO:0046483,GO:0046872,GO:0046914,GO:0048103,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048568,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051301,GO:0051336,GO:0051345,GO:0051704,GO:0052547,GO:0052548,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0072091,GO:0080090,GO:0090304,GO:1901360,GO:1901532,GO:1902033,GO:1902035,GO:1903706,GO:1903708,GO:2000026,GO:2000112,GO:2000116,GO:2000648,GO:2000765,GO:2001056
Exons3
Evalue1.15e-61
EggNOG OGsKOG2061@1|root,KOG2061@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, MYND-type
Ec32 orthologEc-01_012170.1
Descriptionpositive regulation of hematopoietic stem cell proliferation
Cds size741
COG categoryO
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186116.6600606-CDS-P-wetherbeei_contig17403:542..9571683186116.6600606-CDS-P-wetherbeei_contig17403:542..957Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17403 543..957 +
1683186116.6693382-CDS-P-wetherbeei_contig17403:1002..11751683186116.6693382-CDS-P-wetherbeei_contig17403:1002..1175Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17403 1003..1175 +
1683186116.6770754-CDS-P-wetherbeei_contig17403:1262..14151683186116.6770754-CDS-P-wetherbeei_contig17403:1262..1415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17403 1263..1415 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17403.2.1prot_P-wetherbeei_contig17403.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17403 543..1415 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17403.2.1

>prot_P-wetherbeei_contig17403.2.1 ID=prot_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
EGEADEDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRD
LPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEV
RGVRVLRCQLPRDNPFYSFEPDDDNDGGTGKGGGGSGSAWGAKLCAVCGC
RGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVACDGGGDGEAAAAAA
SAESSAPQVSTDAAAGTAAITAPKPTAAAALVAQLFPEFEIVVEPER
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mRNA from alignment at P-wetherbeei_contig17403:543..1415+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17403.2.1 ID=mRNA_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig17403:543..1415+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGGAGAGGCGGACGAGGACGTCCAGCTTGGATTCCTCGAGCCCCTGGA AGAAGGCGCCGCCGGCGACCTGCTCTTCCGCTGCGCCGATTGGCACACCT GGGACGGCGGCAAGGTCGGCGGCCGCCCCATCTGGCTCAACCCGCGGGAC CTGCCGCCGCCGGCCGCCGTCGCCTGCCCAACATGCGGCGGGCCAATGCC GCTGCTGCTGCAAATCTACTGCCCCATCGACGAGATCACCACCGCCTTCC ACCGCGCGCTCTACGTCTTCTGCTGCCGCAAGGCCGCCTGCGTCGAGGTG CGCGGCGTCCGCGTTCTGCGCTGCCAGCTGCCACGTGACAACCCTTTTTA CTCCTTCGAACCGGACGACGACAACGACGGTGGCACTGGAAAAGGCGGCG GCGGCAGCGGCAGCGGTAGCAATAATGGCAACGGAAGAGTCGCCCGGAAT TGCCCGGAAGCGTGGGGCGCCAAGCTATGCGCAGTGTGCGGCTGCCGTGG CGATGCCCGCTGCACCCGGTGCAGCGACGCACACTACTGCGGCCGCGAGC ACCAGGTTGCACACTGGCGCGGCGGCCACCGTGCCGCCTGTCGTCCTGTC GCCTGTGACGGCGGCGGTGACGGCGAGGCGGCTGTTGGGGTGGCGGCGAT GGCGAGAGCAATCGATGTTGCGACATCGGAGGCAGAAACCGTAAAAAAAG CGGAGCAGAGAACGGTGGAGGCAGCGGCTGCTTCAGCGGAATCATCCGCG CCACAGGTATCAACTGACGCTGCTGCAGGGACGGCAGCGATAACGGCACC AAAGCCGACGGCTGCGGCGGCGCTGGTGGCGCAGCTCTTCCCTGAGTTTG AAATCGTCGTGGAGCCTGAGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17403:543..1415+

>mRNA_P-wetherbeei_contig17403.2.1 ID=mRNA_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig17403:543..1415+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGGAGAGGCGGACGAGGACGTCCAGCTTGGATTCCTCGAGCCCCTGGA
AGAAGGCGCCGCCGGCGACCTGCTCTTCCGCTGCGCCGATTGGCACACCT
GGGACGGCGGCAAGGTCGGCGGCCGCCCCATCTGGCTCAACCCGCGGGAC
CTGCCGCCGCCGGCCGCCGTCGCCTGCCCAACATGCGGCGGGCCAATGCC
GCTGCTGCTGCAAATCTACTGCCCCATCGACGAGATCACCACCGCCTTCC
ACCGCGCGCTCTACGTCTTCTGCTGCCGCAAGGCCGCCTGCGTCGAGGTG
CGCGGCGTCCGCGTTCTGCGCTGCCAGCTGCCACGTGACAACCCTTTTTA
CTCCTTCGAACCGGACGACGACAACGACGGTGGCACTGGAAAAGGCGGCG
GCGGCAGCGGCAGCGCGTGGGGCGCCAAGCTATGCGCAGTGTGCGGCTGC
CGTGGCGATGCCCGCTGCACCCGGTGCAGCGACGCACACTACTGCGGCCG
CGAGCACCAGGTTGCACACTGGCGCGGCGGCCACCGTGCCGCCTGTCGTC
CTGTCGCCTGTGACGGCGGCGGTGACGGCGAGGCGGCTGCAGCGGCTGCT
TCAGCGGAATCATCCGCGCCACAGGTATCAACTGACGCTGCTGCAGGGAC
GGCAGCGATAACGGCACCAAAGCCGACGGCTGCGGCGGCGCTGGTGGCGC
AGCTCTTCCCTGAGTTTGAAATCGTCGTGGAGCCTGAGCGC
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