mRNA_P-wetherbeei_contig17403.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A6H5KD20_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD20_9PHAE) HSP 1 Score: 207 bits (527), Expect = 6.990e-61 Identity = 109/241 (45.23%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWR-GGHRAACRPVACDGGGDGXXXXXXXXXXSSAPQVSTDAAAGTA-AITAPKPTAAAALVAQLFPEFEIVVEPE 738
VQLG + PLE A +LF+ DWH WDGGK GG P+WLNPRDLP P + C C P+ L+Q+YCP+D AFHR LYVFCC KA+C V+ LRCQLPR+N FY +EP WGAKLC VCG + C++C A YCGREHQ HW+ GGH+ C D G +A + + AGT A T PK A+A++ F EFE+ V PE
Sbjct: 36 VQLGTVLPLEGSLADSVLFKNVDWHDWDGGKAGGWPVWLNPRDLPAPQDMRCGECSQPLSFLVQLYCPLDHEDDAFHRCLYVFCCPKASCSNNSSVKALRCQLPRENEFYPYEPSHKASILAKQQKGSDPETWGAKLCCVCGQLAKSACSKCRIARYCGREHQTLHWKTGGHKKVC---TSDNG--------------TATVAARKSTAGTLHARTTPKTLASASV----FREFEVEVRPE 255
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A4D9CTI8_9STRA (MYND-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTI8_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.670e-54 Identity = 104/251 (41.43%), Postives = 133/251 (52.99%), Query Frame = 1
Query: 7 EADEDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPV-----ACDGGGDGXXXXXXXXXXSSAPQVSTDAAAGTAAITA-PKPTAAAALVAQLFPEFEIVVEPER 741
+ D+ +QLGF+E L E LLF+ DW WDGGKVGG+PIWLNPRDLPP + CP+C P+ +LQIYCP+DE AFHRALYVF C+K C V+ LRCQLPR+N F++ +P D +A + C VCG R D C C YC +HQ W+ GH+ CR V A +GGG P S + A + P + + FPE+EIV+E ER
Sbjct: 98 DGDQGMQLGFVERLPEEMQNRLLFQDPDWRAWDGGKVGGKPIWLNPRDLPPQTLLLCPSCQDPLSFVLQIYCPLDEPEEAFHRALYVFVCQKFRCQGPGSVKALRCQLPRENSFFASDPRD---IWNNGGRGKGRAALAVRTCDVCGLRADKVCAGCKRVSYCTHKHQKEGWKTGHKLDCRKVEREKLAPEGGGQ---ERDANLTSGDVPASSVNLPQANAPVLGRPADSGVKNALRSTFPEYEIVIEEER 342
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7S3HTG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTG5_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.320e-53 Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 19 DVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVACDG 567
DVQLGF++ + + LF DW WDGGKVGG P+WLNP DLPP +A+ C C P+ L+QIYCPIDE+ +AFHRA+Y+FCC++ C++ V+ LR QLPR NPFY F+P + +A A CA+CGCRG C++C + YC + HQ HWR C ++C G
Sbjct: 31 DVQLGFIDKTMQ----NELFGDRDWRNWDGGKVGGAPVWLNPADLPPTSAMQCVHCCDPLQFLMQIYCPIDEVDSAFHRAIYLFCCKRKDCLKQGSVKCLRSQLPRTNPFYCFDPAVEAPSSAG-------TAPRAPTCALCGCRGSLVCSQCKNVSYCSKAHQKDHWR------CHKLSCKG 196
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7S3HTH5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTH5_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.850e-51 Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 19 DVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVACDG 567
DVQLGF++ + + LF DW WDGGKVGG P+WLNP DLPP +A+ C C P+ L+QIYCPIDE+ +AFHRA+Y+FCC++ C++ V+ LR QLPR NPFY F+P + +A A CA+CGCRG C++C + YC + HQ HWR C ++C G
Sbjct: 31 DVQLGFIDKTMQ----NELFGDRDWRNWDGGKVGGAPVWLNPADLPPTSAMQCVHCCDPLQFLMQIYCPIDEVDSAFHRAIYLFCCKRKDCLKQGSVKCLRSQLPRTNPFYCFDPAVEAPSSAG-------TAPRAPTCALCGCRGSLVCSQCKNVSYCSKAHQKDHWR------CHKLSCKG 196
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: K3WP47_GLOUD (MYND-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP47_GLOUD) HSP 1 Score: 159 bits (402), Expect = 1.350e-44 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 1
Query: 16 EDVQLGFLEPLEEGAAGDLLFRCA-DWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHW-RGGHRAAC 546
+DV+LGF+ +++ A LL DW WDGGKVGG+P+WLNPR +P A +AC CG + LLQIYCP+D++ AFHR+LYVFCCR A C + +V R QLP+ N Y P++ ++ C +C R C+ C A YC +EHQ HW RGGH+ C
Sbjct: 22 QDVELGFVARVQDADASTLLLHAQPDWSQWDGGKVGGKPVWLNPRTVPTAAQLACVECGHALSFLLQIYCPLDDVADAFHRSLYVFCCRHAGCSKQGNGKVFRAQLPQRNALY---PEESGVTHFEPPASDEMPSF----CVLCNQRAVFTCSACHVARYCSKEHQKDHWSRGGHKQDC 193
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A2D4CFA8_PYTIN (MYND-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFA8_PYTIN) HSP 1 Score: 162 bits (411), Expect = 2.820e-44 Identity = 77/182 (42.31%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 16 EDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAACRPVAC 561
E V+LGF+ +E+ LL +DW WDGG VGG+P WLNP+ +P A++C C P+ LLQIYCP+D+ AFHR+LYVFCCR+ C + R RCQLPR+N FY LC +CG R C+ C A YC +EHQ HW GH+ C AC
Sbjct: 34 EGVELGFVAKVEQPVDAKLLHDSSDWGEWDGGLVGGKPRWLNPKAVPSNEALSCSACAKPLAFLLQIYCPLDDQPDAFHRSLYVFCCRQTGCAKQSQARAFRCQLPRENAFYPATSGVQDFVSTEQLPA---------LCVLCGQRASFTCSACKVAQYCSKEHQKDHWSHGHKTDC--AAC 204
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A8C6D6R5_MOSMO (Programmed cell death 2 n=2 Tax=Moschus moschiferus TaxID=68415 RepID=A0A8C6D6R5_MOSMO) HSP 1 Score: 156 bits (395), Expect = 8.590e-44 Identity = 80/175 (45.71%), Postives = 97/175 (55.43%), Query Frame = 1
Query: 22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
+LGF+E AA R + + KVGGRP WL+ LP P +ACP CG PM LLQ+Y P+ AFHR L++FCCR C G+RV R QLPR N FYS+EP + GA+LC VCGC G RC+RC AHYC +EHQ WR GH+ AC
Sbjct: 9 AELGFVE-----AAPSWRLRSEQFPS----KVGGRPAWLSAAGLPGPPELACPLCGRPMAFLLQVYAPLSGRADAFHRCLFLFCCRTPPCCC--GLRVFRNQLPRRNDFYSYEPPSEDPPSETGESVYLQLKSGAQLCRVCGCSGPKRCSRCHKAHYCSKEHQSLDWRLGHKQAC 172
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A7R9YC03_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC03_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.050e-43 Identity = 80/186 (43.01%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRG-------VRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWR-GGHRAACRPV 555
V+LGF+EP+ LLF+ DW WDGG GG+P+WLNP P A + C C P+ LLQ+Y P+D++ TAFHRALYVFCCR C++ +RVLRCQLPR N +Y P++ A C VCGC RC RC YC + HQ+ HW GGH+ C V
Sbjct: 10 VELGFVEPVGSPDV-PLLFQQRDWRQWDGGLAGGKPVWLNPHAPPTAALLTCGICKEPLCFLLQVYAPLDDVETAFHRALYVFCCRNGRCLKQSAGTMHPGALRVLRCQLPRRNAWYPGSPEEGDDEELLDGQV-------APTCEVCGCGATKRCGRCKGPIYCSKAHQMDHWTFGGHKRECGKV 187
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: A0A4X1VXJ3_PIG (MYND-type domain-containing protein n=3 Tax=Sus scrofa TaxID=9823 RepID=A0A4X1VXJ3_PIG) HSP 1 Score: 154 bits (388), Expect = 1.020e-42 Identity = 79/175 (45.14%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
V+LGF+E AA R + + KVGGRP WL+ LP P +AC CG P+ LLQ+Y P+ AFHR L++FCCR C G+RV R QLPR N FYSFEP + GA LC VCGC G C+RC AHYC +EHQ WR GH+ AC
Sbjct: 9 VELGFVE-----AAPAWRLRSEQFPS----KVGGRPAWLSEAGLPGPTELACSLCGHPLAFLLQLYAPLPGRADAFHRGLFLFCCRTPPCCV--GLRVFRNQLPRRNDFYSFEPPSEDPPPETGESLSLQLKSGAHLCRVCGCLGPKTCSRCHQAHYCSKEHQALDWRSGHKQAC 172
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Match: UPI001E1B617C (programmed cell death protein 2 isoform X1 n=1 Tax=Bubalus bubalis TaxID=89462 RepID=UPI001E1B617C) HSP 1 Score: 157 bits (396), Expect = 1.760e-42 Identity = 80/175 (45.71%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 22 VQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDLPPPAAVACPTCGGPMPLLLQIYCPIDEITTAFHRALYVFCCRKAACVEVRGVRVLRCQLPRDNPFYSFEPDDDXXXXXXXXXXXXXSAWGAKLCAVCGCRGDARCTRCSDAHYCGREHQVAHWRGGHRAAC 546
+LGF+EP A R + + KVGGRP WL+ LP P +ACP CG PM LLQ+Y P+ AFHR L++FCCR C G+RV R QLPR N FYS+EP + GA LC VCGC G RC+RC AHYC +EHQ WR GH+ AC
Sbjct: 9 AELGFVEP-----APSWRLRSEQFPS----KVGGRPAWLSAAGLPGPPELACPLCGRPMAFLLQVYAPLPGRADAFHRCLFLFCCRTPPCCC--GLRVFRNQLPRQNNFYSYEPPSEDPPSETGESVYLHLKSGAHLCRVCGCSGPKRCSRCHKAHYCSKEHQSLDWRLGHKQAC 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17403.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17403.2.1 >prot_P-wetherbeei_contig17403.2.1 ID=prot_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp EGEADEDVQLGFLEPLEEGAAGDLLFRCADWHTWDGGKVGGRPIWLNPRDback to top mRNA from alignment at P-wetherbeei_contig17403:543..1415+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17403.2.1 ID=mRNA_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig17403:543..1415+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17403:543..1415+ >mRNA_P-wetherbeei_contig17403.2.1 ID=mRNA_P-wetherbeei_contig17403.2.1|Name=mRNA_P-wetherbeei_contig17403.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig17403:543..1415+ (Phaeothamnion wetherbeei SAG_119_79)back to top |