mRNA_P-wetherbeei_contig17382.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A0S8DQG3_9GAMM (LAM_G_DOMAIN domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium SG8_47 TaxID=1703406 RepID=A0A0S8DQG3_9GAMM) HSP 1 Score: 71.6 bits (174), Expect = 2.040e-11 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 76 TSTTLVVTKPTGTVSGDVLLAGLTVKSTSATVTAPAGWTLVTSIANSTNVKTYA----FTKVAGGSEPSSYTFTFSSATKAAVGL 318
TS L+++KPTGT DV++A +++S SAT+T P+GW+LV I N T+V TY+ + KVAG SEPSSYT+T +S T A G+
Sbjct: 2425 TSGNLIISKPTGTAQDDVMIASFSIRSNSATITPPSGWSLVRRI-NQTSVGTYSSLAVYIKVAGASEPSSYTWTLASYTYVAAGI 2508
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A554JJT3_9BACT (LamGL domain-containing protein n=1 Tax=Parcubacteria group bacterium Gr01-1014_56 TaxID=2017190 RepID=A0A554JJT3_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 2.570e-10 Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 82 TTLVVTKPTGTVSGDVLLAGLTVKSTS-ATVTAPAGWTLVTSIANSTNVKTYAFTKVAGGSEPSSYTFTFSSATKAAVGL 318
T L +TKP+GTV+GD LLA ++V S A +TAP+GW LV + N TN+ ++ K G SEP+SYT+T S T+AA G+
Sbjct: 46 TELTLTKPSGTVAGDFLLANVSVNGGSVAGITAPSGWALVARVDNDTNISIASYWKTVGASEPTSYTWTISPQTRAAGGI 125
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A540X3K8_9DELT (Cell wall anchor protein n=8 Tax=Myxococcus TaxID=32 RepID=A0A540X3K8_9DELT) HSP 1 Score: 66.2 bits (160), Expect = 1.250e-9 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 76 TSTTLVVTKPTGTVSGDVLLAGLTVKSTSATV-TAPAGWTLVTSIANSTNVKTYAFTKVAGGSEPSSYTFTFSSA 297
T T+L +TKP GTV+GDVLL L+ ++ A V TAPAGWT + S +++ +K + F KVAG SEP+SY FTF +A
Sbjct: 64 TVTSLTLTKPAGTVAGDVLLVRLSNRNNVAAVATAPAGWTFLRSDQSASQIKAWVFYKVAGASEPASYAFTFDAA 138
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A2V7BXI4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7BXI4_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.140e-8 Identity = 36/84 (42.86%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 73 GTSTTLVVTKPTGTVSGDVLLAGLTVKSTSATVTAPAGWTLVT--SIANSTNVKTYAFTKVAGGSEPSSYTFTFSSATKAAVGL 318
G++ TL + +P GT+ GD+++AG+ V+ +SAT+TAP GWTL + N ++ + +VAG SEP+SYT+TFS++ +A G+
Sbjct: 64 GSALTLTINRPAGTLGGDLMVAGIAVRPSSATITAPVGWTLQRRQNNTNPSDSSLAVYYRVAGTSEPASYTWTFSASAGSAGGI 147
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A4Y9RPT4_9BURK (Uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium OM1 TaxID=2561929 RepID=A0A4Y9RPT4_9BURK) HSP 1 Score: 63.2 bits (152), Expect = 1.640e-8 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 31 TINERAVSSANTGSGTSTTLVVTKPTGTVSGDVLLAGLTVKSTSATVTAPAGWTLVTSIANSTN--VKTYAFTKVAGGSEPSSYTFTFSSATKAAVGL 318
T+ RA S A+ SGT L + P GT SGDV++A + V+ ++A VTAP+GWTLV + +N + + +V G+EP+SYT+T S T A+ G+
Sbjct: 37 TVGFRASSQASAQSGT---LAIAVPAGTASGDVMVASIAVRPSTAAVTAPSGWTLVRQVVQGSNSALTLQTYYRVVSGTEPASYTWTASGGTAASGGI 131
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: UPI00167D393D (hypothetical protein n=2 Tax=Streptomyces hydrogenans TaxID=1873719 RepID=UPI00167D393D) HSP 1 Score: 62.4 bits (150), Expect = 2.620e-8 Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 46 AVSSANT---GSGTSTTLVVTKPTGTVSGDVLLAGLTVKSTSATVTAPAGWTLVTSIANSTNVKTYAFTKVAGGSEPSSYTFTFSSA 297
AVS NT S +ST++VVTKPTGT SGD+L A +T S VTAPAGWT + T + + F KVAGGSEPSS+TF+ SA
Sbjct: 2 AVSHVNTQVGSSASSTSVVVTKPTGTASGDLLTAFVT--SNYQAVTAPAGWTKLDDYGIET-FRVHVFRKVAGGSEPSSFTFSVPSA 85
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A1Q7D1E1_9ACTN (CBM6 domain-containing protein n=1 Tax=Actinobacteria bacterium 13_2_20CM_2_66_6 TaxID=1803492 RepID=A0A1Q7D1E1_9ACTN) HSP 1 Score: 62.0 bits (149), Expect = 3.720e-8 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 7 ARQSTVIATINERAVSSANTGSGTSTTLVVTKPTGTVSGDVLLAGLTVKSTSATVTAPAGWTLVTSI--ANSTNVKTYAFTKVAGGSEPSSYTFTFSSATKAAVGL 318
A +T+ +I+ RA SS T GT LV+ +P T DV++A + V+ ++AT+TAPAGWTLV I AN+T + KVAG EP SY++T + +T A G+
Sbjct: 24 ATAATLGGSISFRAASSVATTGGT---LVIAQPAATAVNDVMIAAVGVRPSTATITAPAGWTLVRRINNANATANALAVYRKVAGAVEPGSYSWTLAGSTHAVAGI 126
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: UPI0018C388BC (hypothetical protein n=1 Tax=Planomonospora sp. ID67723 TaxID=2738134 RepID=UPI0018C388BC) HSP 1 Score: 61.2 bits (147), Expect = 6.100e-8 Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 49 VSSANTGSGTSTTLVVTKPTGTVSGDVLLAGLTVK-STSATVTAPAGWTLVTSIANSTN-VKTYAFTKVAGGSEPSSYTFTFSSATKAAV 312
V S +T +GTSTT+ VTKPTGT SGD+L+A T +++ AP+GWT++ S+ + N + T KVAGGSEP+SY +T + A +
Sbjct: 5 VRSVSTATGTSTTITVTKPTGTASGDLLVASFTNDFGAFSSIVAPSGWTVLDSLDHGNNSLHTVLAYKVAGGSEPASYDWTQAVADAVVI 94
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: A0A3A8HVQ6_9DELT (Cell wall anchor protein (Fragment) n=2 Tax=Corallococcus terminator TaxID=2316733 RepID=A0A3A8HVQ6_9DELT) HSP 1 Score: 61.2 bits (147), Expect = 6.360e-8 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 55 SANTGSGTS-TTLVVTKPTGTVSGDVLLAGLTVKS-TSATVTAPAGWTLVTSIANSTNVKTYAFTKVAGGSEPSSYTFTFSSATKAA 309
S++T SG S T+L +TKP GTV+GDVLLA L ++ +A T PAGWT + S +++ +K + F KVA SEP+SY FT A+ A
Sbjct: 57 SSSTASGISLTSLTLTKPAGTVAGDVLLARLVNRNFVAAVATPPAGWTFLRSDQSASQLKAWVFYKVATASEPASYAFTLDLASNLA 143
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Match: S9P7S3_9DELT (Uncharacterized protein n=2 Tax=Cystobacter fuscus TaxID=43 RepID=S9P7S3_9DELT) HSP 1 Score: 61.2 bits (147), Expect = 6.550e-8 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 55 SANTGSGTS-TTLVVTKPTGTVSGDVLLAGLTVKSTSATV-TAPAGWTLVTSIANSTNVKTYAFTKVAGGSEPSSYTFTFSSATKAA 309
S +T +G S T+L +TKPTGTV+GDVLLA L ++ A V T PAGWTL+ S +++ +K++ F KVA SEP+SY F A+ A
Sbjct: 57 SGSTATGKSITSLSITKPTGTVAGDVLLAHLVNRNNVAAVATPPAGWTLLRSDQSASQLKSWVFYKVATASEPASYAFAIDLASYMA 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17382.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17382.2.1 >prot_P-wetherbeei_contig17382.2.1 ID=prot_P-wetherbeei_contig17382.2.1|Name=mRNA_P-wetherbeei_contig17382.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp IVARQSTVIATINERAVSSANTGSGTSTTLVVTKPTGTVSGDVLLAGLTVback to top mRNA from alignment at P-wetherbeei_contig17382:934..1434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17382.2.1 ID=mRNA_P-wetherbeei_contig17382.2.1|Name=mRNA_P-wetherbeei_contig17382.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig17382:934..1434+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17382:934..1434+ >mRNA_P-wetherbeei_contig17382.2.1 ID=mRNA_P-wetherbeei_contig17382.2.1|Name=mRNA_P-wetherbeei_contig17382.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig17382:934..1434+ (Phaeothamnion wetherbeei SAG_119_79)back to top |