mRNA_P-wetherbeei_contig17374.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A6H5KB68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KB68_9PHAE) HSP 1 Score: 221 bits (563), Expect = 9.050e-68 Identity = 107/154 (69.48%), Postives = 122/154 (79.22%), Query Frame = 1
Query: 1 KGATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPGD-AQQFLHRLSKDNIAQ 459
KG +G GVRFR+ +YNLLAEIYATQ YP CDFWALSWGYRK NLLREL EA AD+LCLQEVQ+DAY FQP L+E+GYDGLYK+KTRE G +G+VDGCAMFW R KFR+SENYT+ NECAR AV AM P + FL R+SKDN+AQ
Sbjct: 299 KGVGSGGGVRFRLCSYNLLAEIYATQQAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAMFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEGHHFLMRVSKDNVAQ 450
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A6S9ETF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ETF7_HETAK) HSP 1 Score: 209 bits (532), Expect = 1.320e-61 Identity = 97/155 (62.58%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 1 KGATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPGDAQQFLHRLSKDNIAQAS 465
KGA G G+RFRV TYN+LAEIYATQ YP DFWAL+W YRK+NLLREL E+ AD+LCLQEVQAD Y + L E GY+GLYK+KTR+SMG G+VDGCA+ W R+KFR++ENY IE N+CAR A ++ L P A +LHR+ KDNIAQ +
Sbjct: 280 KGAGGGGGLRFRVVTYNILAEIYATQQMYPHIDFWALNWTYRKHNLLRELLESSADVLCLQEVQADHYENFLARALQEAGYEGLYKAKTRDSMGSFGKVDGCALLWRRSKFRLAENYAIEFNDCARRAAASLGLGPEAAAAYLHRVCKDNIAQVA 434
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A835Z3I4_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I4_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.100e-59 Identity = 102/188 (54.26%), Postives = 121/188 (64.36%), Query Frame = 1
Query: 28 RFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQ----------------------------------------EVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPG--DAQQFLHRLSKDNIAQAS 465
RFR+ +YNLLAEIYATQ YP+CDFWALSW YR+ NL REL E+ AD+LCLQ EVQADAY + FQP L E+G+DGLYKSKTRESMGLVG+VDGCA+FW RN+FR+ ENY IE NECAR + A+ L P + Q++HRLSKDNIAQ +
Sbjct: 261 RFRIVSYNLLAEIYATQQAYPSCDFWALSWNYRRANLARELVESAADVLCLQKQHRGGGERPALQNNGRDTAQLRSEMRGGTAAGGSAGAGSEVQADAYHAFFQPLLLEKGFDGLYKSKTRESMGLVGKVDGCALFWRRNRFRLVENYAIEFNECARRSAGAIGLSPNTEEGNQYMHRLSKDNIAQVA 448
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A7S2RZN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZN0_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.090e-58 Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 16 GVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGA---VDAMHLRPGDAQQFLHRLSKDNIAQ 459
G G RFR+ TYN+LAEIYATQ QYP CDFWALSW YR N+LRE+ +A D++CLQEVQAD Y +H L+E G++G+YK KTR+SMGL+G+VDGCA+FW R KF + E+Y+IE NE A+ V M+ R + FL++L KDN+AQ
Sbjct: 8 GGGERFRIVTYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPDVICLQEVQADHYETHMYNALSENGFEGVYKQKTRQSMGLMGKVDGCALFWRRTKFHLVESYSIEFNELAQRQCTQVLGMNPRSEEGVAFLNKLCKDNVAQ 158
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A6U1PWN2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1PWN2_CYCTE) HSP 1 Score: 192 bits (488), Expect = 3.260e-57 Identity = 92/155 (59.35%), Postives = 114/155 (73.55%), Query Frame = 1
Query: 4 GATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECA-RGAVDAMHLRPGDAQ--QFLHRLSKDNIAQ 459
G AG G RFR+ATYN+LAEIYATQ QYP CDFWALSW YR N+LRE+ +A D+LCLQEVQAD Y + ++E GY+G+YK KTR+SMGL G+VDGCA+FW R KF + E+Y+IE NE A R A + L P + F++RLSKDN+AQ
Sbjct: 45 GGAAG-GARFRIATYNVLAEIYATQQQYPHCDFWALSWDYRFQNILREIVDASPDVLCLQEVQADHYENDLYTAMSEAGYEGVYKQKTRQSMGLAGKVDGCALFWRRTKFVLIESYSIEFNELAQRQATQVLGLNPRSEEGAAFINRLSKDNVAQ 198
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A448ZJ52_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ52_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.060e-56 Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 1
Query: 4 GATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECA-RGAVDAMHLRPGDAQ--QFLHRLSKDNIAQ 459
GA AG G RFR+ TYN+LAEIYATQ QYP CD WAL+W YR +N++RE+ +A D++CLQEVQAD Y +H ++E+G++G+YK KTR+SMGL G+VDGCA+FW R+KF + E+Y+IE NE A R A M L P + FL+RLSKDN+AQ
Sbjct: 293 GAGAGSGARFRIVTYNVLAEIYATQQQYPYCDIWALNWEYRFHNIMREIVDAAPDVVCLQEVQADHYENHLYASMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNELAQRQATQVMGLNPRSEEGINFLNRLSKDNVAQ 447
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A4D9CX26_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX26_9STRA) HSP 1 Score: 192 bits (488), Expect = 4.950e-56 Identity = 89/152 (58.55%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 7 ATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPGDAQQFLHRLSKDNIAQA 462
A A G++FR+ATYN+LAEIYATQ+ YP CD W L+W YRK NLLRE+ E AD+L LQEVQAD Y P+L+E GYDGLYK KTRESMG G+VDGCA+ W R KFR++E Y +E N+CAR + L FL R+ KDN+AQA
Sbjct: 111 AAAAGGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQAAELGLSHDQKHTFLTRVLKDNVAQA 262
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A1E7FFJ1_9STRA (Exo_endo_phos-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFJ1_9STRA) HSP 1 Score: 194 bits (494), Expect = 5.370e-56 Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 4 GATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECA-RGAVDAMHLRPGDAQ--QFLHRLSKDNIAQ 459
GA AG G RFR+ +YN+LAEIYATQ QYP CD WALSW YR +N++RE+ +A D++CLQEVQAD Y H ++E+G++G+YK KTR+SMGL G+VDGCA+FW R KF + E+Y+IE NE A R A + L P + FL+RLSKDNIAQ
Sbjct: 290 GAGAGSGARFRIVSYNVLAEIYATQQQYPYCDIWALSWEYRFHNIMREIVDAAPDVICLQEVQADHYEDHIYAAMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGLNPRSEEGTNFLNRLSKDNIAQ 444
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: W7UA28_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA28_9STRA) HSP 1 Score: 194 bits (493), Expect = 8.780e-56 Identity = 89/152 (58.55%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 7 ATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPGDAQQFLHRLSKDNIAQA 462
A A G++FR+ATYN+LAEIYATQ+ YP CD W L+W YRK NLLRE+ E AD+L LQEVQAD Y P+L+E GYDGLYK KTRESMG G+VDGCA+ W R KFR++E Y +E N+CAR + L FL R+ KDN+AQA
Sbjct: 245 AAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQA 396
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Match: A0A7S1FRM5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRM5_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.040e-55 Identity = 86/155 (55.48%), Postives = 113/155 (72.90%), Query Frame = 1
Query: 1 KGATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELAEAKADILCLQEVQADAYASHFQPQLAERGYDGLYKSKTRESMGLVGQVDGCAMFWNRNKFRVSENYTIELNECARGAVDAMHLRPGDAQ--QFLHRLSKDNIAQ 459
KGA G G RFRV TYN+LAEIYATQ YP CDFWALSW YR N+LREL + D++CLQEVQAD Y +H P L E G++G+YK KTR++MG+ G+VDGCA+FW ++KF + E+Y+IE NE A+ + + P + +L+RLS+DN+AQ
Sbjct: 233 KGAATGNGARFRVITYNILAEIYATQQMYPYCDFWALSWDYRFQNILRELKDVGPDVMCLQEVQADHYETHLYPSLNEAGFEGVYKQKTRQAMGISGKVDGCAIFWKKSKFHLVESYSIEFNELAQRQCQVLGMNPRSEEGAAYLNRLSRDNVAQ 387 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17374.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17374.1.1 >prot_P-wetherbeei_contig17374.1.1 ID=prot_P-wetherbeei_contig17374.1.1|Name=mRNA_P-wetherbeei_contig17374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp KGATAGVGVRFRVATYNLLAEIYATQSQYPTCDFWALSWGYRKNNLLRELback to top mRNA from alignment at P-wetherbeei_contig17374:1..1300+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17374.1.1 ID=mRNA_P-wetherbeei_contig17374.1.1|Name=mRNA_P-wetherbeei_contig17374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1300bp|location=Sequence derived from alignment at P-wetherbeei_contig17374:1..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17374:1..1300+ >mRNA_P-wetherbeei_contig17374.1.1 ID=mRNA_P-wetherbeei_contig17374.1.1|Name=mRNA_P-wetherbeei_contig17374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig17374:1..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top |