mRNA_P-wetherbeei_contig17364.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17364.1.1
Unique NamemRNA_P-wetherbeei_contig17364.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A836CM03_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM03_9STRA)

HSP 1 Score: 314 bits (804), Expect = 8.630e-105
Identity = 152/162 (93.83%), Postives = 160/162 (98.77%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +VAD+LKSNYADECYNPNGIVPRAVSMIK  FPD+IVCTD+ALDPYSDQGHDGVV+DG+ILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALD+EGFTDTSILAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE
Sbjct:  146 KVADNLKSNYADECYNPNGIVPRAVSMIKERFPDSIVCTDIALDPYSDQGHDGVVKDGKILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTDTSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 307          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: Q9ARD2_9PHAE (Delta-aminolevulinic acid dehydratase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9ARD2_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.370e-99
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+NYADEC+NPNGIVPRAVSMIK  FPD+IVCTDVALDPYSDQGHDGVV+DG+ILNDETIMQL KQ VCQARAGSDVVAPSDMMDGRVGAIRDALD+EGFTD SILAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAE
Sbjct:  161 KVPDQLKTNYADECHNPNGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVKDGKILNDETIMQLTKQVVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAE 322          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: D8LEC7_ECTSI (Delta-aminolevulinic acid dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC7_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 1.180e-98
Identity = 145/162 (89.51%), Postives = 155/162 (95.68%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+NYADECYNP+GIVPRAVSMIK  FPD+IVCTDVALDPYSDQGHDGVV+DG+ILNDETIMQL KQ VCQARAG+DVVAPSDMMDGRVGAIRDALD+EGFTD SILAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAE
Sbjct:  163 KVPDELKTNYADECYNPSGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVQDGKILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAE 324          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: Q9ARD9_FUCVE (Delta-aminolevulinic acid dehydratase n=1 Tax=Fucus vesiculosus TaxID=49266 RepID=Q9ARD9_FUCVE)

HSP 1 Score: 293 bits (749), Expect = 4.620e-96
Identity = 141/162 (87.04%), Postives = 152/162 (93.83%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            QV D LK+NY +ECYNP GIVPRAVSMIK  FPD+IVCTDVALDPYSDQGHDGVV+DG+ILNDETIMQL KQ VCQARAG+DVVAPSDMMDGR+GAIRDALDAEGFT+ SI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA E
Sbjct:  176 QVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEE 337          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S2XYQ0_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ0_9STRA)

HSP 1 Score: 291 bits (745), Expect = 9.570e-96
Identity = 141/162 (87.04%), Postives = 152/162 (93.83%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+NY +E YNPNGIVPRAVSM+K A PD+IVCTDVALDPYSDQGHDG+VRDG+ILNDETI QLCKQ+VCQARAGSDVVAPSDMMDGRV AIRDALD+EGFT+ SIL+YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALD AE
Sbjct:  155 KVDDKLKTNYGEESYNPNGIVPRAVSMLKDALPDSIVCTDVALDPYSDQGHDGIVRDGKILNDETIEQLCKQSVCQARAGSDVVAPSDMMDGRVKAIRDALDSEGFTNVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDVAE 316          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S1UCC0_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCC0_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.250e-95
Identity = 141/162 (87.04%), Postives = 153/162 (94.44%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+N  +E YNPNGIVPRAVSMIK AFP+AIVCTDVALDPYSDQGHDG+V DGRILNDETI QLCKQ+VCQARAGSDVVAPSDMMDGRVGAIRDALD+EGFT+ SI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA+E
Sbjct:  186 KVPDELKTNRGEESYNPNGIVPRAVSMIKEAFPEAIVCTDVALDPYSDQGHDGIVEDGRILNDETIEQLCKQSVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDASE 347          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S2FMB3_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMB3_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.810e-95
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+NYADECYNPNGIVPRAVSMIK  FP++IVCTDVALDPYSDQGHDG+V+DG+ILNDETI QLCKQAV QARAGSDV+APSDMMDGRV AIRDALD+EGFTD SILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDP NGREA++E  LD AE
Sbjct:  152 KVPDELKTNYADECYNPNGIVPRAVSMIKDKFPESIVCTDVALDPYSDQGHDGIVKDGKILNDETIGQLCKQAVAQARAGSDVIAPSDMMDGRVMAIRDALDSEGFTDASILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPGNGREAIIECGLDEAE 313          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S2G7P7_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7P7_9STRA)

HSP 1 Score: 289 bits (740), Expect = 5.810e-95
Identity = 140/162 (86.42%), Postives = 151/162 (93.21%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LKSN ADECYNPNGIVPRAV+MIK  FP+AIV TDVALDPYSDQGHDG+V+DG+ILNDETI QLCKQAVCQARAGSD++APSDMMDGRV AIRDALD+EGFTD SILAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EA LD AE
Sbjct:  156 KVPDDLKSNEADECYNPNGIVPRAVAMIKDKFPEAIVTTDVALDPYSDQGHDGIVKDGKILNDETIGQLCKQAVCQARAGSDIIAPSDMMDGRVMAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEADLDVAE 317          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S3XWB7_HETAK (Delta-aminolevulinic acid dehydratase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWB7_HETAK)

HSP 1 Score: 287 bits (735), Expect = 9.390e-95
Identity = 138/162 (85.19%), Postives = 147/162 (90.74%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +V D LK+N ADECYNP GIVPRAV M+K A PDA VCTDVALDPYSDQGHDGVV DG+I+ND TI QLCKQ +CQARAG+DVVAPSDMMDGRVGAIRDALD+EGFTD SILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANG EAL+EAALDA E
Sbjct:  132 KVPDELKTNMADECYNPEGIVPRAVRMLKEALPDATVCTDVALDPYSDQGHDGVVEDGKIMNDITIQQLCKQVICQARAGADVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGEEALIEAALDAQE 293          
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Match: A0A7S2NW51_9STRA (Porphobilinogen synthase (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NW51_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.040e-94
Identity = 137/162 (84.57%), Postives = 150/162 (92.59%), Query Frame = 1
Query:    1 QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQGHDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAE 486
            +VAD LK+N   E YNP GIVPRAV MIK A+P++IVCTDVALDPYSDQGHDGVV DG+ILND TI QLCKQAVCQA+AGSDVVAPSDMMDGRVGAIRDALD+EGFTD SIL+YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANG+EAL+EA+LD+AE
Sbjct:   64 KVADELKTNLGVEAYNPEGIVPRAVRMIKEAYPESIVCTDVALDPYSDQGHDGVVEDGKILNDVTINQLCKQAVCQAKAGSDVVAPSDMMDGRVGAIRDALDSEGFTDVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGQEALLEASLDSAE 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17364.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM03_9STRA8.630e-10593.83Delta-aminolevulinic acid dehydratase n=1 Tax=Trib... [more]
Q9ARD2_9PHAE1.370e-9990.12Delta-aminolevulinic acid dehydratase n=1 Tax=Lami... [more]
D8LEC7_ECTSI1.180e-9889.51Delta-aminolevulinic acid dehydratase n=2 Tax=Ecto... [more]
Q9ARD9_FUCVE4.620e-9687.04Delta-aminolevulinic acid dehydratase n=1 Tax=Fucu... [more]
A0A7S2XYQ0_9STRA9.570e-9687.04Delta-aminolevulinic acid dehydratase n=1 Tax=Fibr... [more]
A0A7S1UCC0_9STRA1.250e-9587.04Delta-aminolevulinic acid dehydratase n=1 Tax=Phae... [more]
A0A7S2FMB3_9STRA1.810e-9585.80Delta-aminolevulinic acid dehydratase n=1 Tax=Flor... [more]
A0A7S2G7P7_9STRA5.810e-9586.42Delta-aminolevulinic acid dehydratase n=1 Tax=Dict... [more]
A0A7S3XWB7_HETAK9.390e-9585.19Delta-aminolevulinic acid dehydratase (Fragment) n... [more]
A0A7S2NW51_9STRA1.040e-9484.57Porphobilinogen synthase (Fragment) n=2 Tax=Leptoc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17364contigP-wetherbeei_contig17364:206..1436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LEC7
Preferred nameALAD
PFAMsALAD
Model size486
Max annot lvl2759|Eukaryota
KEGG rclassRC00918,RC01781
KEGG koko:K01698,ko:K09490,ko:K09499
KEGG TC1.A.33
KEGG ReactionR00036
KEGG Pathwayko00860,ko01100,ko01110,ko01120,ko03060,ko04141,ko04918,ko05020,map00860,map01100,map01110,map01120,map03060,map04141,map04918,map05020
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001666,GO:0001775,GO:0002237,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006979,GO:0007584,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009314,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010043,GO:0010044,GO:0010212,GO:0010243,GO:0010266,GO:0010269,GO:0010288,GO:0010605,GO:0012505,GO:0014070,GO:0014823,GO:0016043,GO:0016192,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019222,GO:0019438,GO:0022607,GO:0030141,GO:0030162,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031667,GO:0031960,GO:0031974,GO:0031982,GO:0031983,GO:0032025,GO:0032268,GO:0032269,GO:0032496,GO:0032940,GO:0033013,GO:0033014,GO:0033197,GO:0033273,GO:0033993,GO:0034097,GO:0034641,GO:0034774,GO:0036230,GO:0036293,GO:0042119,GO:0042168,GO:0042176,GO:0042177,GO:0042221,GO:0042440,GO:0042493,GO:0042802,GO:0043167,GO:0043169,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045055,GO:0045321,GO:0045471,GO:0045861,GO:0046148,GO:0046483,GO:0046677,GO:0046685,GO:0046686,GO:0046689,GO:0046872,GO:0046903,GO:0046914,GO:0048519,GO:0048523,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051384,GO:0051597,GO:0051704,GO:0051707,GO:0051716,GO:0060205,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0070013,GO:0070482,GO:0070541,GO:0070542,GO:0070670,GO:0070887,GO:0071241,GO:0071248,GO:0071284,GO:0071310,GO:0071345,GO:0071353,GO:0071704,GO:0071840,GO:0080090,GO:0097305,GO:0097708,GO:0099503,GO:0101002,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901700,GO:1901799,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1904813,GO:1904854
Exons3
Evalue1.94e-99
EggNOG OGsCOG0113@1|root,KOG2794@2759|Eukaryota
EC4.2.1.24
Descriptionporphobilinogen synthase activity
Cds size486
COG categoryH
BiGG ReactioniRC1080.CRv4_Au5_s2_g8620_t1
BRITEko00000,ko00001,ko00002,ko01000,ko03110,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186115.4167383-CDS-P-wetherbeei_contig17364:205..4331683186115.4167383-CDS-P-wetherbeei_contig17364:205..433Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17364 206..433 +
1683186115.4270515-CDS-P-wetherbeei_contig17364:785..9591683186115.4270515-CDS-P-wetherbeei_contig17364:785..959Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17364 786..959 +
1683186115.43461-CDS-P-wetherbeei_contig17364:1352..14361683186115.43461-CDS-P-wetherbeei_contig17364:1352..1436Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17364 1353..1436 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17364.1.1prot_P-wetherbeei_contig17364.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17364 206..1436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17364.1.1

>prot_P-wetherbeei_contig17364.1.1 ID=prot_P-wetherbeei_contig17364.1.1|Name=mRNA_P-wetherbeei_contig17364.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
QVADSLKSNYADECYNPNGIVPRAVSMIKSAFPDAIVCTDVALDPYSDQG
HDGVVRDGRILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDA
LDAEGFTDTSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGR
EALVEAALDAAE
back to top

mRNA from alignment at P-wetherbeei_contig17364:206..1436+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17364.1.1 ID=mRNA_P-wetherbeei_contig17364.1.1|Name=mRNA_P-wetherbeei_contig17364.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1231bp|location=Sequence derived from alignment at P-wetherbeei_contig17364:206..1436+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTAGCGGACTCGCTCAAGTCCAACTATGCGGATGAGTGCTACAACCC CAACGGCATAGTACCGCGCGCCGTCTCCATGATCAAGTCTGCGTTCCCCG ACGCCATCGTCTGCACCGACGTGGCGCTGGACCCGTACTCGGATCAAGGC CACGACGGCGTGGTGCGCGACGGGCGGATTCTGAACGATGAGACCATCAT GCAACTCTGCAAGCAGGCGGTCTGCCAGGTGTGTGGTTAGGGGTAGCGGT GGGAATGGCGGCGGTAGAGTGGCGATGGAACTTCTGTAACTGCCTCTTGT TTCGCGTTTCTCGTTTCTGAGCTTTCTCTCTTGTAGGATGCAGAGAACGT CGTGTGGCTTCGTTTCATCTGCCCAGATGGGGTTATCTGGTGGGCATTTG CGTCCTTTAATCAATAGGAAAACTTTGCGCCTTTGCTAAGGGGAAGTAAT CGCTGATCTCTTTACTGCTCCGCCTCTTCCTCTTCTCCCAAATCCCAATT CTCTCCAACCACGGGTTATCAAACGCGCCATCGCCGGCACCATCACCGTC ACCACCTGCCGTCGCAACTGCCCCGGTCAGGCCCGCGCCGGATCGGACGT GGTGGCGCCGTCAGACATGATGGACGGCCGCGTGGGCGCCATCCGGGACG CGTTGGACGCCGAGGGCTTCACCGACACGTCCATCCTCGCATACACGGCC AAATACGCCTCCGCGTACTACGGGCCCTTCCGGGACGCGCTCGACTCCCA TCCCGTGAGTTTCCTTTTTATAATTGCCCTTTTTGGGTTGGTGGTTTGTT GACTTTTTGCTTTCTCCTGTTCTTTGCCGTCTCATTTTCTGTGTTTGCTC TTCGTTTGGCTTTCTGTAGTCTTGTGTACAACAGATCTTGGGCGTCAGTT TGGTTGCACTTTTGGACCCTTGTCCGTTAGTTTCAACTTGCTGTTACATC TTGCCTTTTCCCCGTTTCTCTTTTCGCATTTCTCCCGCCCTTTTCTTCCT GCTTTCTGATCTGCATCGCGGCCGATGGATTCCCAGTGCGTCTCCACTCA CTGTCGCCTGCTACTTGCCTGCCCTATCCTTACCTGGCATTACCTGCATA TTTCCGCCGCTCTGCTCTACTATTATCTGCCACTTTGCATCTGACAGGGT TTCGGCGACAAGAAGACGTACCAGCAGGACCCCGCCAACGGCCGCGAGGC GCTGGTCGAGGCCGCCCTCGACGCCGCCGAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17364:206..1436+

>mRNA_P-wetherbeei_contig17364.1.1 ID=mRNA_P-wetherbeei_contig17364.1.1|Name=mRNA_P-wetherbeei_contig17364.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig17364:206..1436+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTAGCGGACTCGCTCAAGTCCAACTATGCGGATGAGTGCTACAACCC
CAACGGCATAGTACCGCGCGCCGTCTCCATGATCAAGTCTGCGTTCCCCG
ACGCCATCGTCTGCACCGACGTGGCGCTGGACCCGTACTCGGATCAAGGC
CACGACGGCGTGGTGCGCGACGGGCGGATTCTGAACGATGAGACCATCAT
GCAACTCTGCAAGCAGGCGGTCTGCCAGGCCCGCGCCGGATCGGACGTGG
TGGCGCCGTCAGACATGATGGACGGCCGCGTGGGCGCCATCCGGGACGCG
TTGGACGCCGAGGGCTTCACCGACACGTCCATCCTCGCATACACGGCCAA
ATACGCCTCCGCGTACTACGGGCCCTTCCGGGACGCGCTCGACTCCCATC
CCGGTTTCGGCGACAAGAAGACGTACCAGCAGGACCCCGCCAACGGCCGC
GAGGCGCTGGTCGAGGCCGCCCTCGACGCCGCCGAG
back to top