mRNA_P-wetherbeei_contig17355.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A3N5FBX6_9BURK (Polar amino acid ABC transporter substrate-binding protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5FBX6_9BURK) HSP 1 Score: 400 bits (1029), Expect = 1.880e-138 Identity = 192/262 (73.28%), Postives = 222/262 (84.73%), Query Frame = 1
Query: 55 SASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
+A + QPI T VDATFAPHAM KLGGG+EGFN+DL NEIA+RL RPI IE TQFSGLIPGLNAKKYD++ APTTVT ERA+ALLFTEGYLDTD+ F+ KK+D +IK+L++LKGKT+SVNKGSAY++WAK NAEKYGFK+D+YDTNADAVQAVLSGRA NLAGNTV AWAAKQNP++KT+ + TGLVWA+PFR DD R++VSMVIKCMK DG + ++EKWFG K ADSS K GHGVPNM GYDATPVALKCS
Sbjct: 29 AAGTVHAQPIKTGVDATFAPHAMAKLGGGMEGFNIDLGNEIARRLGRPIEIEGTQFSGLIPGLNAKKYDFVLAPTTVTKERAEALLFTEGYLDTDYLFVQKKADADIKTLDDLKGKTVSVNKGSAYESWAKANAEKYGFKFDIYDTNADAVQAVLSGRAGANLAGNTVAAWAAKQNPLIKTSLLVPTGLVWAIPFRKDDVENRNKVSMVIKCMKADGTIGKMHEKWFGAKAAADSSAMKPVAGHGVPNMPGYDATPVALKCS 290
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A536WQ00_9PROT (Transporter substrate-binding domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WQ00_9PROT) HSP 1 Score: 400 bits (1027), Expect = 2.310e-138 Identity = 195/269 (72.49%), Postives = 223/269 (82.90%), Query Frame = 1
Query: 34 FLATLALSASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
FL L + + LAQQPI T +DATFAPHAMPK GGG+EGFN+DLANE+AKR+ RPI IE T+FS LIPGLNAKKYD++ APTTVTPERAKA+LF+EGY++TD+ FL KK+D +IK LE+LKGKTI+VNKGSAY+TWAK NAEKYGFKYDVY TNADAVQAVLSGRA N+AG+TVV WAAKQNP VK TY KTGLVWA+PFR DDK GR QV+ V+KCMK DG +A LYEKWFG KP DS K+APGHGVP+M GYD P KCS
Sbjct: 8 FLVVLFAAGTALAQQPIRTGIDATFAPHAMPKPGGGLEGFNIDLANELAKRMGRPIQIEGTEFSALIPGLNAKKYDFLIAPTTVTPERAKAMLFSEGYMETDYLFLQKKADKDIKGLEDLKGKTITVNKGSAYETWAKANAEKYGFKYDVYGTNADAVQAVLSGRADANMAGHTVVLWAAKQNPAVKATYLYKTGLVWAMPFRLDDKEGRAQVNNVLKCMKLDGTVARLYEKWFGIKPAKDSWVYKVAPGHGVPDMPGYDPGPYPPKCS 276
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A1G6M966_9BURK (Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Variovorax sp. CF079 TaxID=1882774 RepID=A0A1G6M966_9BURK) HSP 1 Score: 377 bits (969), Expect = 2.120e-129 Identity = 178/262 (67.94%), Postives = 214/262 (81.68%), Query Frame = 1
Query: 55 SASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
SA+ P+ T VDATFAPHAM KLGGG++GFN++L E+A+R R + IE T+FSGL+PGLNAKKYD+I AP TVTPERAKA+LFTEGYLDTD+ F++KK I +LEELKGKTI+VNKGSAY+ WAK+NA+KYGF +DVY TNADAVQAV SGRA NLAGNTV WAAKQNP V+T+YT+KTGLVWA+ FRADDK+GR+ SM +KCMKQDG +A L EKWFG +P A ++ K+APGHGVP ++GYDATPV CS
Sbjct: 24 SATAQTGAPLKTGVDATFAPHAMVKLGGGLQGFNIELGEELARREGRKLEIEGTEFSGLVPGLNAKKYDFILAPVTVTPERAKAMLFTEGYLDTDYTFVIKKGTAPIAALEELKGKTIAVNKGSAYENWAKDNAQKYGFSFDVYGTNADAVQAVQSGRAFANLAGNTVAGWAAKQNPAVQTSYTVKTGLVWALAFRADDKAGRNAASMALKCMKQDGTVARLAEKWFGARPDASATAVKLAPGHGVPGLEGYDATPVTPSCS 285
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A516H1D6_9PROT (Transporter substrate-binding domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A516H1D6_9PROT) HSP 1 Score: 375 bits (962), Expect = 2.140e-128 Identity = 178/255 (69.80%), Postives = 211/255 (82.75%), Query Frame = 1
Query: 76 QPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
Q + T VDATFAPHAM KLGGG++GFN++L E+AKR+ + + +E T+FSGLIPGLNAKKYD++ AP TVTPERAK LLFTEGYL+TDF F+ KKS P IKSL++LKGKTI+VNKGSAY+TW ++NA KYGFKYDVY +N+DA+QAV SGRA NL GNTV AWAAKQN VKT+YTI TGLVWA+ FR DDK+GRD SM +KCMK+DG +A EKWFG KP D++ IAPGHGVPNM+GYDATPV LKCS
Sbjct: 27 QVLKTGVDATFAPHAMVKLGGGLQGFNIELGEEMAKRMGKKLEVEGTEFSGLIPGLNAKKYDFVLAPVTVTPERAKTLLFTEGYLNTDFTFVEKKSAPGIKSLDDLKGKTIAVNKGSAYETWTRDNAAKYGFKYDVYGSNSDAIQAVQSGRADANLGGNTVSAWAAKQNQEVKTSYTITTGLVWALAFRGDDKAGRDAASMALKCMKKDGFVAKAAEKWFGFKPGPDAAAVVIAPGHGVPNMEGYDATPVTLKCS 281
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A6N1XBK5_9BURK (Transporter substrate-binding domain-containing protein n=2 Tax=Acidovorax TaxID=12916 RepID=A0A6N1XBK5_9BURK) HSP 1 Score: 372 bits (956), Expect = 1.570e-127 Identity = 179/262 (68.32%), Postives = 214/262 (81.68%), Query Frame = 1
Query: 55 SASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
S++ LAQ P+ +AVDATFAPHAM KLGGG++GFNVDL E+AKRL R I IE +FSGL+PGLN+K+YD++ AP TVTPERAK+LLFTEGYLDTD+ FL K+ P + LE+LKGKT++VNKGS Y+ WA++NA +YGFK+DVY NADAVQAV SGRA NLAG TVVAWAAKQNP +KT+YTIKTGLVWA+PFRADDK+GRD S +KCMKQDG +A L KWFG +P AD + KIAPG GVP +GYDATPV KC+
Sbjct: 17 SSAALAQAPLRSAVDATFAPHAMAKLGGGVQGFNVDLGEELAKRLGRKIEIEGAEFSGLVPGLNSKRYDFLVAPVTVTPERAKSLLFTEGYLDTDYTFLGTKAAPAVTRLEDLKGKTLAVNKGSNYEGWARDNAARYGFKFDVYGANADAVQAVQSGRADYNLAGTTVVAWAAKQNPNLKTSYTIKTGLVWALPFRADDKAGRDAASNALKCMKQDGTIAKLAVKWFGFQPGADDAAVKIAPGTGVPGTEGYDATPVTPKCA 278
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: UPI0013722184 (transporter substrate-binding domain-containing protein n=1 Tax=Achromobacter aestuarii TaxID=2511204 RepID=UPI0013722184) HSP 1 Score: 371 bits (953), Expect = 6.160e-127 Identity = 179/277 (64.62%), Postives = 223/277 (80.51%), Query Frame = 1
Query: 10 RLSRIALPFLATLALSASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
R R+ L L + A +++ A +P+ T VDATFAPHAMPKLGGG++GFN++L IAK+L I IE T+++ LIPGLNAKKYD++ APTTVTPERAKALLF+EGYL+TD+ F+V K P++ SLEELKGKT++VNKGSAY+ WA++NA KYGFKYDVY TNADA+QAV SGRA TNLAGNTV AWAAKQNP V+TT TI TGLVWA+ FR DDK+GRD+VSM +KC+KQDG ++ L +KWFG P A ++ I PG GVP++ GYDATPV L+C+
Sbjct: 10 RAGRVGLALLMSGACASAAWAAKPLVTGVDATFAPHAMPKLGGGLDGFNIELGQAIAKKLGTTIEIEGTEYAALIPGLNAKKYDFVLAPTTVTPERAKALLFSEGYLNTDYTFVVAKKAPDLTSLEELKGKTVAVNKGSAYENWARDNAAKYGFKYDVYATNADAIQAVQSGRADTNLAGNTVSAWAAKQNPAVRTTMTIPTGLVWALAFRLDDKAGRDRVSMALKCLKQDGTVSKLAQKWFGFTPAAGTAAVTIVPGQGVPDLPGYDATPVKLECA 286
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: I3CSQ1_9BURK (Amino acid ABC transporter solute-binding protein n=13 Tax=Herbaspirillum TaxID=963 RepID=I3CSQ1_9BURK) HSP 1 Score: 369 bits (948), Expect = 3.940e-126 Identity = 176/263 (66.92%), Postives = 210/263 (79.85%), Query Frame = 1
Query: 52 LSASVLAQQ-PISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKC 837
LSA +AQ P+ T VDATFAPHAM KLGGG++GFN+DL E+A+RL R I IE T+FSGL+PGLNAKKYD++ AP T TPERAK++LFTEGYLDTD+ F++KK I +LE+LKGKTISVNKGSAY+ WA++NA KYGFKYDVY NADAVQAV SGRA NLAG+TV AWAAKQNP V+T+YT+KTGLVWA+ FR DDK+GRD M +KCMKQDG L + +KWFG P D++ K+ G GVP +DGYD TPV LKC
Sbjct: 27 LSAGAMAQSGPLRTGVDATFAPHAMVKLGGGLQGFNIDLGEELARRLGRKIEIEGTEFSGLVPGLNAKKYDFVLAPVTATPERAKSMLFTEGYLDTDYTFVIKKGAAPIHALEDLKGKTISVNKGSAYELWARDNAPKYGFKYDVYGNNADAVQAVQSGRADANLAGSTVAAWAAKQNPAVQTSYTVKTGLVWALAFRLDDKAGRDAAGMALKCMKQDGTLGKIAQKWFGYTPAPDATVVKVGVGQGVPGLDGYDPTPVTLKC 289
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A7W8KQC7_9BURK (Polar amino acid transport system substrate-binding protein n=3 Tax=Herbaspirillum TaxID=963 RepID=A0A7W8KQC7_9BURK) HSP 1 Score: 369 bits (947), Expect = 5.590e-126 Identity = 178/279 (63.80%), Postives = 215/279 (77.06%), Query Frame = 1
Query: 4 SMRLSRIALPFLATLALSASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKCS 840
S+ S +A + +LA + + +P+ T VDATFAPHAM KLGGG++GFN+DL E+A+RL R I IE T+FSGL+PGLNAKKYD++ AP T TPER+KA+LFTEGYLDTD+ F++KK IK LEELKGKTISVNKGSAY+ WA++NA KYGFKYDVY NADAVQAV SGRA NLAG+TV AWAAKQNP V+TTYT+KTGLVWA+ FR DDK+GRD +KCMKQDG L + +KWFG P D++ K+ G GVP +DGYD TPV KCS
Sbjct: 12 SLNCSLLAAAAVMSLAATGACAQAEPLRTGVDATFAPHAMVKLGGGLQGFNIDLGEELARRLGRKIEIEGTEFSGLVPGLNAKKYDFVLAPVTATPERSKAMLFTEGYLDTDYTFVIKKGGAAIKGLEELKGKTISVNKGSAYEMWARDNAPKYGFKYDVYGNNADAVQAVQSGRADANLAGSTVAAWAAKQNPAVQTTYTVKTGLVWALAFRLDDKAGRDAAGNALKCMKQDGTLGKIAQKWFGYTPAPDATVVKVGVGQGVPGLDGYDPTPVTPKCS 290
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A1W6YRF3_9BORD (Polar amino acid ABC transporter substrate-binding protein n=2 Tax=Bordetella genomosp. 8 TaxID=1416806 RepID=A0A1W6YRF3_9BORD) HSP 1 Score: 366 bits (939), Expect = 7.200e-125 Identity = 174/268 (64.93%), Postives = 215/268 (80.22%), Query Frame = 1
Query: 34 FLATLALSASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKC 837
FL A + + QP+ T VDATFAPHAMPKL GG++GFN+DL +AK+L +NIE T++S LIPGLNAKKYD++ APTT TPERAK+LLF+EGYL+TD+ FLV KS P+I L++LKGKTI+VNKGSAY++WA +NAEKYGFKYDVY +NADAVQAV SGRA NLAGNTV AWAAKQNP VK TYTI+TGLVWA+ FR DDK+GRD++S +KC+KQ+G ++ L +KWFG KP A S+ A + G GVP ++GYD TPV+L C
Sbjct: 16 FLLAAACCGTAWSAQPLVTGVDATFAPHAMPKLAGGLQGFNIDLGEALAKQLGTTVNIEGTEYSALIPGLNAKKYDFVLAPTTATPERAKSLLFSEGYLNTDYTFLVAKSKPDITGLQDLKGKTIAVNKGSAYESWAHDNAEKYGFKYDVYASNADAVQAVQSGRADANLAGNTVTAWAAKQNPAVKATYTIQTGLVWALAFRKDDKAGRDRISTALKCLKQNGTVSALAQKWFGFKPAAGSAAATVGVGQGVPGLEGYDPTPVSLHC 283
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Match: A0A246PZ20_9BURK (Polar amino acid ABC transporter substrate-binding protein n=1 Tax=Achromobacter sp. HZ28 TaxID=2015171 RepID=A0A246PZ20_9BURK) HSP 1 Score: 365 bits (938), Expect = 1.060e-124 Identity = 181/282 (64.18%), Postives = 218/282 (77.30%), Query Frame = 1
Query: 19 RIALPFLATLALSASVLA---------QQPISTAVDATFAPHAMPKLGGGIEGFNVDLANEIAKRLKRPINIEPTQFSGLIPGLNAKKYDWIAAPTTVTPERAKALLFTEGYLDTDFQFLVKKSDPEIKSLEELKGKTISVNKGSAYDTWAKNNAEKYGFKYDVYDTNADAVQAVLSGRASTNLAGNTVVAWAAKQNPMVKTTYTIKTGLVWAVPFRADDKSGRDQVSMVIKCMKQDGALATLYEKWFGGKPPADSSTAKIAPGHGVPNMDGYDATPVALKC 837
++ +PF +S +VLA P+ TAVD+TFAPHAM KL GG++GFNVDL EIAKRL R I IEP +FSGL+PGLN+++YD++ AP TVTPERAK LLFTEGYLDTD+ FL KK P +++LE+LKGK I+VNKGS Y++WAK+NAEKYGF+YDVY NADAVQAVL+GRA NLAG TVVAWAAKQNP + T+YTIKTGLVWA+ FR DD+ GR QVS V+KCMKQDG ++ L +KWFG P D +IAPG GVP+MDGYDAT V KC
Sbjct: 2 KVLMPFFRRCVVSGAVLAGCLGQAHAESAPLRTAVDSTFAPHAMAKLDGGVQGFNVDLGQEIAKRLGREIKIEPAEFSGLVPGLNSRRYDFLIAPVTVTPERAKTLLFTEGYLDTDYTFLEKKDAPALQNLEQLKGKVIAVNKGSNYESWAKDNAEKYGFRYDVYGGNADAVQAVLAGRADYNLAGTTVVAWAAKQNPRLATSYTIKTGLVWALAFRKDDREGRQQVSNVLKCMKQDGTVSALAKKWFGFAPKPDDWAVRIAPGTGVPDMDGYDATLVTPKC 283 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17355.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17355.2.1 >prot_P-wetherbeei_contig17355.2.1 ID=prot_P-wetherbeei_contig17355.2.1|Name=mRNA_P-wetherbeei_contig17355.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp MRLSRIALPFLATLALSASVLAQQPISTAVDATFAPHAMPKLGGGIEGFNback to top mRNA from alignment at P-wetherbeei_contig17355:576..1418+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17355.2.1 ID=mRNA_P-wetherbeei_contig17355.2.1|Name=mRNA_P-wetherbeei_contig17355.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig17355:576..1418+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17355:576..1418+ >mRNA_P-wetherbeei_contig17355.2.1 ID=mRNA_P-wetherbeei_contig17355.2.1|Name=mRNA_P-wetherbeei_contig17355.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig17355:576..1418+ (Phaeothamnion wetherbeei SAG_119_79)back to top |