mRNA_P-wetherbeei_contig17355.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17355.1.1
Unique NamemRNA_P-wetherbeei_contig17355.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A3N5EVX1_9BURK (N-carbamoyl-D-amino-acid hydrolase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5EVX1_9BURK)

HSP 1 Score: 315 bits (808), Expect = 1.800e-106
Identity = 146/167 (87.43%), Postives = 158/167 (94.61%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVTG 501
            K YF VG+EGFKVW+TMGT++GMCICNDRRWPETFRVM LQSAE+VVLGYNTPS NIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIV+P+GEIAAQSSTEEDE+IF NCDLALGDTFR+ VFNFA+HRRPEHYRLIV+R GAG P+ G
Sbjct:  144 KRYFQVGDEGFKVWDTMGTRMGMCICNDRRWPETFRVMSLQSAEVVVLGYNTPSVNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVSPTGEIAAQSSTEEDEVIFFNCDLALGDTFRKFVFNFAQHRRPEHYRLIVERTGAGDPLPG 310          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A536W6E2_9PROT (N-carbamoyl-D-amino-acid hydrolase n=3 Tax=Bacteria TaxID=2 RepID=A0A536W6E2_9PROT)

HSP 1 Score: 313 bits (801), Expect = 2.080e-105
Identity = 146/165 (88.48%), Postives = 152/165 (92.12%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPV 495
            K YF VGNEGFKVW TMG KIGMCICNDRRWPETFRVMGLQ AELVVLG+NTPS NIHWPEPPHLRMF HLLLLQAHAHENALWVGAAAKCGAEDGFHMI GS IVAPSGEIAAQS TE+DE+I  NCDLALGDTFREHVFNFAKHRRPEHYRLIV+R GAG+P+
Sbjct:  144 KRYFEVGNEGFKVWQTMGAKIGMCICNDRRWPETFRVMGLQGAELVVLGFNTPSLNIHWPEPPHLRMFTHLLLLQAHAHENALWVGAAAKCGAEDGFHMIGGSCIVAPSGEIAAQSMTEDDEVIAVNCDLALGDTFREHVFNFAKHRRPEHYRLIVERTGAGEPL 308          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A1F4QBK4_9BACT (N-carbamoyl-D-amino-acid hydrolase n=2 Tax=unclassified candidate division NC10 TaxID=1207073 RepID=A0A1F4QBK4_9BACT)

HSP 1 Score: 294 bits (753), Expect = 3.970e-98
Identity = 136/165 (82.42%), Postives = 149/165 (90.30%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPV 495
            K YF VG+EGFKVW+T+GTKIGMCICNDRRWPETFRVMGLQSAE+VVLGYNTPSHNIHW E PHLRMFHH LLLQAHAHENALWVGAAAKCG EDG HM  GS IVAP+GEI AQ+STE DE+I  NCDL+LGD FR+HVF+FA+HRRPEHYRLIV+RVGAG P+
Sbjct:  144 KRYFLVGDEGFKVWSTVGTKIGMCICNDRRWPETFRVMGLQSAEVVVLGYNTPSHNIHWNESPHLRMFHHQLLLQAHAHENALWVGAAAKCGFEDGCHMFGGSCIVAPTGEIVAQASTEGDEVITYNCDLSLGDNFRKHVFDFARHRRPEHYRLIVERVGAGDPI 308          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A4Q5X4D8_9BURK (N-carbamoyl-D-amino-acid hydrolase (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5X4D8_9BURK)

HSP 1 Score: 286 bits (731), Expect = 1.240e-94
Identity = 130/165 (78.79%), Postives = 145/165 (87.88%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPV 495
            K YF VGNEGFKVWN +GT++GMCICNDRRWPETFRVMGLQSAE+V LGYNTPS NIHWPEPPHLRMF HLL LQA A++NA+WV AA KCGAEDGFHMI GSAIV+P+GEI AQ+  E+DE+IF   DLALGDTFR+HVFNFAKHRRPEHY LIV+R GAG P+
Sbjct:  147 KKYFEVGNEGFKVWNALGTQVGMCICNDRRWPETFRVMGLQSAEIVALGYNTPSLNIHWPEPPHLRMFSHLLSLQAAAYQNAIWVAAAGKCGAEDGFHMIGGSAIVSPTGEIVAQAQGEDDEVIFVRADLALGDTFRQHVFNFAKHRRPEHYGLIVERTGAGAPL 311          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A519EKG8_9BURK (N-carbamoyl-D-amino-acid hydrolase n=2 Tax=Variovorax TaxID=34072 RepID=A0A519EKG8_9BURK)

HSP 1 Score: 283 bits (723), Expect = 1.730e-93
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVT 498
            K +F VGNEGF VW  +GT IG CICNDRRWPETFRVM LQSA++VVLGYNTPS NIHW EP HLRMFHHLL LQA+A++NALW+GAAAKCGAEDGFHMI GSAIVAPSGEI AQS +EEDE+IF +CD+ALGD FR+H+FNFAKHRRPEHY LI +R GAG+P+ 
Sbjct:  145 KKFFEVGNEGFGVWPMLGTTIGQCICNDRRWPETFRVMSLQSAQMVVLGYNTPSWNIHWKEPVHLRMFHHLLSLQANAYQNALWIGAAAKCGAEDGFHMIGGSAIVAPSGEIVAQSQSEEDEVIFVSCDMALGDNFRQHIFNFAKHRRPEHYGLITERTGAGEPLV 310          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A1G6M7L7_9BURK (Predicted amidohydrolase n=1 Tax=Variovorax sp. CF079 TaxID=1882774 RepID=A0A1G6M7L7_9BURK)

HSP 1 Score: 283 bits (723), Expect = 2.390e-93
Identity = 132/167 (79.04%), Postives = 144/167 (86.23%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVTG 501
            K YF VGNEGFKVW T+GT+IGMCICNDRRWPETFRVMGLQSAEL VLGYNTPS NIHW EPPHLRM  HLL LQA A++NA+WV A+AKCGAEDGFHMI GSAIVAPSGEI AQ+  EEDE++  N DLALGD FREHVFNFAKHRRPEHY LIV+R GAG+ + G
Sbjct:  147 KKYFEVGNEGFKVWKTLGTRIGMCICNDRRWPETFRVMGLQSAELAVLGYNTPSWNIHWSEPPHLRMSSHLLSLQAAAYQNAMWVAASAKCGAEDGFHMIGGSAIVAPSGEIVAQAQGEEDEVLVVNADLALGDNFREHVFNFAKHRRPEHYGLIVERTGAGESLGG 313          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A520DGG4_9BURK (N-carbamoyl-D-amino-acid hydrolase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520DGG4_9BURK)

HSP 1 Score: 280 bits (716), Expect = 1.820e-92
Identity = 127/166 (76.51%), Postives = 142/166 (85.54%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVT 498
            K +F VGN+GF VW  +GT +G CICNDRRWPETFRVMGLQ A LVVLGYNTPS NIHW E PHLRMFHHLL LQA+A++NALW+GAAAKCG+EDGFHMI GSAIVAP+GEI AQS +EEDE+IF  CD+ALGD FR HVFNFAKHRRPEHY LI +R+GAG PV 
Sbjct:  145 KKFFEVGNDGFGVWPMLGTNVGQCICNDRRWPETFRVMGLQDARLVVLGYNTPSWNIHWTEAPHLRMFHHLLSLQANAYQNALWIGAAAKCGSEDGFHMIGGSAIVAPTGEIVAQSQSEEDEVIFVACDMALGDDFRNHVFNFAKHRRPEHYGLITERIGAGPPVV 310          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A516H1G3_9PROT (N-carbamoyl-D-amino-acid hydrolase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A516H1G3_9PROT)

HSP 1 Score: 279 bits (714), Expect = 4.160e-92
Identity = 125/165 (75.76%), Postives = 145/165 (87.88%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPV 495
            K +F VGNEGFKVW+ +G +IGMCICNDRRW ET+RVMGLQSAE+V LGYNTPS NIHW EPPHLRMFHHLL LQ +A++N +WV AAAKCG EDGFHMI GSAIVAP+GEI AQ+ +EEDELIF + DL++G+TFREHVFNFAKHRRPEHY+LIV+R GAG P+
Sbjct:  147 KKFFEVGNEGFKVWDALGARIGMCICNDRRWAETYRVMGLQSAEIVALGYNTPSWNIHWNEPPHLRMFHHLLSLQGNAYQNGIWVAAAAKCGKEDGFHMIGGSAIVAPTGEITAQAQSEEDELIFTSADLSIGETFREHVFNFAKHRRPEHYKLIVERTGAGAPL 311          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: J3HYL2_9BURK (Putative amidohydrolase n=3 Tax=Herbaspirillum TaxID=963 RepID=J3HYL2_9BURK)

HSP 1 Score: 280 bits (715), Expect = 4.450e-92
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVT 498
            K YF VGN+GF V + +GT+IG C+CNDRRWPET+RVM LQSA LVVLGYNTPS NIHW EPPHLRMFHHLL LQA+A++N LWV AAAKCG+EDGFHMI GSAIVAP+GEI AQ+  E+DE+IFANCDL LG+TF EHVFNFAKHRRPEHYRLIV+R GAG P+T
Sbjct:  154 KKYFEVGNDGFGVADMLGTRIGQCLCNDRRWPETYRVMSLQSARLVVLGYNTPSWNIHWSEPPHLRMFHHLLSLQANAYQNGLWVAAAAKCGSEDGFHMIGGSAIVAPTGEIVAQAQGEQDEVIFANCDLGLGETFLEHVFNFAKHRRPEHYRLIVERTGAGAPLT 319          
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Match: A0A0U3BEZ7_9BURK (CN hydrolase domain-containing protein n=25 Tax=Oxalobacteraceae TaxID=75682 RepID=A0A0U3BEZ7_9BURK)

HSP 1 Score: 274 bits (701), Expect = 4.300e-90
Identity = 125/166 (75.30%), Postives = 144/166 (86.75%), Query Frame = 1
Query:    1 KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGYNTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMIAGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPEHYRLIVDRVGAGKPVT 498
            K YF VGN+GF V + +GT+IG C+CNDRRWPET+RVM LQSA +V LGYNTPS NIHW EPPHLRMFHHLL LQA+A++N LWV AAAKCG EDGFHMI GSAIVAPSGEI AQ+  EEDE+IFA+CDL LG+TF +HVFNFAKHRRPEHYRLIV+R GAG+P++
Sbjct:  148 KKYFEVGNDGFGVTDMLGTRIGQCLCNDRRWPETYRVMSLQSARIVTLGYNTPSWNIHWNEPPHLRMFHHLLSLQANAYQNGLWVAAAAKCGFEDGFHMIGGSAIVAPSGEIVAQAQGEEDEVIFASCDLQLGETFLQHVFNFAKHRRPEHYRLIVERTGAGEPLS 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17355.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N5EVX1_9BURK1.800e-10687.43N-carbamoyl-D-amino-acid hydrolase n=1 Tax=Burkhol... [more]
A0A536W6E2_9PROT2.080e-10588.48N-carbamoyl-D-amino-acid hydrolase n=3 Tax=Bacteri... [more]
A0A1F4QBK4_9BACT3.970e-9882.42N-carbamoyl-D-amino-acid hydrolase n=2 Tax=unclass... [more]
A0A4Q5X4D8_9BURK1.240e-9478.79N-carbamoyl-D-amino-acid hydrolase (Fragment) n=1 ... [more]
A0A519EKG8_9BURK1.730e-9377.11N-carbamoyl-D-amino-acid hydrolase n=2 Tax=Variovo... [more]
A0A1G6M7L7_9BURK2.390e-9379.04Predicted amidohydrolase n=1 Tax=Variovorax sp. CF... [more]
A0A520DGG4_9BURK1.820e-9276.51N-carbamoyl-D-amino-acid hydrolase n=1 Tax=Variovo... [more]
A0A516H1G3_9PROT4.160e-9275.76N-carbamoyl-D-amino-acid hydrolase n=2 Tax=Alphapr... [more]
J3HYL2_9BURK4.450e-9277.11Putative amidohydrolase n=3 Tax=Herbaspirillum Tax... [more]
A0A0U3BEZ7_9BURK4.300e-9075.30CN hydrolase domain-containing protein n=25 Tax=Ox... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17355contigP-wetherbeei_contig17355:3..509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1144342.PMI40_00561
PFAMsCN_hydrolase
Model size507
Max annot lvl28216|Betaproteobacteria
KEGG koko:K01459
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.29e-93
EggNOG OGsCOG0388@1|root,COG0388@2|Bacteria,1MXG5@1224|Proteobacteria,2VIJM@28216|Betaproteobacteria
EC3.5.1.77
DescriptionN-carbamoyl-D-amino acid hydrolase
Cds size507
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186115.17178-CDS-P-wetherbeei_contig17355:2..5091683186115.17178-CDS-P-wetherbeei_contig17355:2..509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17355 3..509 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17355.1.1prot_P-wetherbeei_contig17355.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17355 3..509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17355.1.1

>prot_P-wetherbeei_contig17355.1.1 ID=prot_P-wetherbeei_contig17355.1.1|Name=mRNA_P-wetherbeei_contig17355.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
KLYFNVGNEGFKVWNTMGTKIGMCICNDRRWPETFRVMGLQSAELVVLGY
NTPSHNIHWPEPPHLRMFHHLLLLQAHAHENALWVGAAAKCGAEDGFHMI
AGSAIVAPSGEIAAQSSTEEDELIFANCDLALGDTFREHVFNFAKHRRPE
HYRLIVDRVGAGKPVTGE*
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mRNA from alignment at P-wetherbeei_contig17355:3..509+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17355.1.1 ID=mRNA_P-wetherbeei_contig17355.1.1|Name=mRNA_P-wetherbeei_contig17355.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig17355:3..509+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCTGTACTTCAATGTCGGCAACGAAGGCTTCAAGGTGTGGAACACCAT GGGCACCAAGATCGGCATGTGCATCTGCAATGACCGCCGCTGGCCGGAAA CCTTCCGCGTCATGGGCCTGCAATCGGCCGAACTGGTGGTGCTGGGTTAC AACACGCCTTCGCACAACATCCACTGGCCTGAGCCGCCGCACCTGCGCAT GTTCCACCACCTGCTGTTGCTGCAAGCTCACGCGCACGAAAATGCCTTGT GGGTCGGCGCTGCGGCCAAGTGCGGCGCCGAGGACGGCTTCCACATGATC GCCGGGTCGGCCATCGTGGCGCCGTCCGGCGAGATCGCCGCCCAATCCTC CACCGAGGAAGACGAACTGATCTTCGCCAACTGCGACCTGGCACTGGGCG ACACTTTCCGCGAGCATGTGTTCAACTTCGCCAAGCACCGCCGGCCCGAG CACTACCGACTGATCGTCGACCGGGTCGGCGCCGGGAAGCCCGTGACAGG GGAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17355:3..509+

>mRNA_P-wetherbeei_contig17355.1.1 ID=mRNA_P-wetherbeei_contig17355.1.1|Name=mRNA_P-wetherbeei_contig17355.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig17355:3..509+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCTGTACTTCAATGTCGGCAACGAAGGCTTCAAGGTGTGGAACACCAT
GGGCACCAAGATCGGCATGTGCATCTGCAATGACCGCCGCTGGCCGGAAA
CCTTCCGCGTCATGGGCCTGCAATCGGCCGAACTGGTGGTGCTGGGTTAC
AACACGCCTTCGCACAACATCCACTGGCCTGAGCCGCCGCACCTGCGCAT
GTTCCACCACCTGCTGTTGCTGCAAGCTCACGCGCACGAAAATGCCTTGT
GGGTCGGCGCTGCGGCCAAGTGCGGCGCCGAGGACGGCTTCCACATGATC
GCCGGGTCGGCCATCGTGGCGCCGTCCGGCGAGATCGCCGCCCAATCCTC
CACCGAGGAAGACGAACTGATCTTCGCCAACTGCGACCTGGCACTGGGCG
ACACTTTCCGCGAGCATGTGTTCAACTTCGCCAAGCACCGCCGGCCCGAG
CACTACCGACTGATCGTCGACCGGGTCGGCGCCGGGAAGCCCGTGACAGG
GGAATAG
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