mRNA_P-wetherbeei_contig17351.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A1F3YFF8_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YFF8_9PROT) HSP 1 Score: 196 bits (499), Expect = 1.840e-59 Identity = 104/152 (68.42%), Postives = 114/152 (75.00%), Query Frame = 1
Query: 7 LPLASEDATLALGAALARGA----LPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREWRQSALA 450
L L E ATL LG ALA GA L G VL L G+LG+GKTTLVRGLLRALG+ GRVKSPTY LVE Y+L RL+LYHFDFYRFKDR EW+SSGFREHFNPESLCIVEWPE A GLL PPDL + L GR A AA+S G WR +AL+
Sbjct: 5 LSLPDEGATLRLGEALAAGAEAGKLRGLVLHLRGELGSGKTTLVRGLLRALGYPGRVKSPTYTLVEPYSLLRLHLYHFDFYRFKDRSEWLSSGFREHFNPESLCIVEWPERAGGLLGPPDLEIHLRYHAQGRTAALAAYSTPGEAWRDAALS 156
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A1F4F6V8_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F6V8_9PROT) HSP 1 Score: 191 bits (484), Expect = 2.680e-57 Identity = 96/144 (66.67%), Postives = 108/144 (75.00%), Query Frame = 1
Query: 1 LRLPLASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREW 432
L + L AT ALGAALA G PGRVL+L GDLGAGKTTLVRGLLRALG+ GRVKSP+Y LVE Y LS L+ YHFDFYRFKDR EW+SSGFRE+FNP S+C+VEWPE A LL+PPD+ V L R+A AHS AG W
Sbjct: 3 LDINLPDAGATEALGAALATGVAPGRVLYLRGDLGAGKTTLVRGLLRALGYAGRVKSPSYTLVEPYKLSSLHFYHFDFYRFKDRSEWLSSGFREYFNPRSVCVVEWPEKAGDLLAPPDVEVQLAFCAEHRKATLQAHSAAGEAW 146
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A1F4FIH1_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FIH1_9PROT) HSP 1 Score: 189 bits (479), Expect = 1.520e-56 Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 13 LASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREW 432
L +ATL LGAALA G PGRVL L G+LG GKTTLVRGLLRALG GRVKSP+Y+L+E Y LS LNLYHFDFYRFKDR EW+SSGFRE+FNP+S+CIVEWPE A L+PPDL + LE A RRA A + AG W
Sbjct: 7 LPDAEATLRLGAALAAGVAPGRVLHLRGELGTGKTTLVRGLLRALGHRGRVKSPSYSLLEPYTLSSLNLYHFDFYRFKDRSEWLSSGFREYFNPDSVCIVEWPERAGEDLAPPDLELRLEFAGEARRASLEARTPAGESW 146
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A537CD86_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=6 Tax=Bacteria TaxID=2 RepID=A0A537CD86_9PROT) HSP 1 Score: 184 bits (468), Expect = 6.910e-55 Identity = 93/146 (63.70%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 13 LASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREWRQSALA 450
L ATL +GAALA G PGRVL L G+LG GKTT+VRGLLR LG+ GRVKSP+Y LVE Y++SRLNLYHFDFYRFKDR EW+SSGFRE+FN +S+C+VEWPE A LL+ PDL + LE A GRR +HS+ G W S L+
Sbjct: 7 LPDAPATLRVGAALAGGVAPGRVLHLRGELGTGKTTVVRGLLRGLGFAGRVKSPSYTLVEPYSISRLNLYHFDFYRFKDRSEWLSSGFREYFNADSVCLVEWPERAGTLLAAPDLDLALEFAGEGRRVILQSHSRTGDVWLLSFLS 152
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A521VJU1_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VJU1_9PROT) HSP 1 Score: 184 bits (467), Expect = 1.110e-54 Identity = 95/146 (65.07%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 13 LASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREWRQSALA 450
L E ATL LGAA A GA G L L G+LG+GKTTL RGL+R LG RVKSPTY L+E Y +SRLNLYHFDFYRFKD EW+SSGF+EHF P+SLC+VEWPE A L PPDL V LEI GRRA AH+ AG W SALA
Sbjct: 8 LPDETATLRLGAAFAPGARNGLTLHLRGELGSGKTTLARGLIRGLGSQERVKSPTYTLLEHYTISRLNLYHFDFYRFKDPSEWLSSGFQEHFGPDSLCLVEWPERAGASLPPPDLEVALEIPARGRRARLRAHTPAGETWLASALA 153
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A6M4HAW7_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=2 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4HAW7_9PROT) HSP 1 Score: 184 bits (466), Expect = 1.730e-54 Identity = 90/140 (64.29%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 10 PLASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGRE 429
PL+ E ATLALGAALARG PG V+FL G+LGAGKTTLVRG LRALG GRVKSPTYALVE+YA+SRL+L+HFDFYRF D EW+ +GFRE FN + + +VEWPE A G L PPDL + L + + GR A +H+ AG +
Sbjct: 8 PLSDETATLALGAALARGLRPGMVVFLQGELGAGKTTLVRGALRALGHEGRVKSPTYALVEVYAVSRLDLHHFDFYRFSDPREWIDAGFRESFNGQVVSLVEWPEKATGQLPPPDLEIALRVLDSGREATLKSHTPAGEQ 147
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A522VRG6_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A522VRG6_9PROT) HSP 1 Score: 181 bits (460), Expect = 1.260e-53 Identity = 95/146 (65.07%), Postives = 104/146 (71.23%), Query Frame = 1
Query: 13 LASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREWRQSALA 450
L E ATL LGAALA GA G L+L G+LG+GKTTL RGL+R LG RVKSPTY L+E Y SRLNLYHFDFYRFKD EW+SSGF+EHF PESLC+VEWPE A L PPDL V LE GRRA A + AG W SALA
Sbjct: 8 LPDEAATLRLGAALAPGARNGLTLYLRGELGSGKTTLARGLIRGLGSEERVKSPTYTLLEHYTFSRLNLYHFDFYRFKDPSEWLSSGFQEHFGPESLCLVEWPERAGASLMPPDLEVALEALATGRRARLRALTPAGEAWLASALA 153
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A1F4B3C7_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B3C7_9PROT) HSP 1 Score: 181 bits (459), Expect = 1.780e-53 Identity = 95/146 (65.07%), Postives = 106/146 (72.60%), Query Frame = 1
Query: 13 LASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREWRQSALA 450
L E+ATL LGAALA GA G V L GDLG+GKTTL RGLLRALG RVKSPTY LVE Y +SRLNLYHFDFYRF D EW+SSGF E+F P++LC+VEWPE A L+PPDL V LE + GRRA A S AG +W SA A
Sbjct: 8 LPDEEATLGLGAALAAGAHNGLVCHLRGDLGSGKTTLARGLLRALGCQERVKSPTYTLVEHYTVSRLNLYHFDFYRFNDPAEWLSSGFPEYFGPDALCLVEWPERAGATLAPPDLEVALEFPQSGRRARLRALSPAGGDWLASASA 153
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A521YXF5_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YXF5_9PROT) HSP 1 Score: 181 bits (458), Expect = 2.210e-53 Identity = 94/144 (65.28%), Postives = 106/144 (73.61%), Query Frame = 1
Query: 1 LRLPLASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAGREW 432
L + L AT ALGAALA G PGRVL L GDLGAGKTTLVRGLLRALG+ GRVKSP+Y LVE Y +S L+ YHFDFYRFKDR EW+SSGFRE+FN S+C+VEWPE A LL+ PDL V L + R+A AHS AG W
Sbjct: 3 LDINLPDPAATEALGAALAAGVAPGRVLHLRGDLGAGKTTLVRGLLRALGYRGRVKSPSYTLVEPYEVSSLHFYHFDFYRFKDRSEWLSSGFREYFNSHSVCVVEWPEKAGDLLALPDLEVELFFSGDHRKATLQAHSAAGEAW 146
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Match: A0A2U1RX31_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RX31_9PROT) HSP 1 Score: 180 bits (456), Expect = 5.710e-53 Identity = 92/140 (65.71%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 4 RLPLASEDATLALGAALARGALPGRVLFLSGDLGAGKTTLVRGLLRALGWTGRVKSPTYALVELYALSRLNLYHFDFYRFKDREEWVSSGFREHFNPESLCIVEWPEMAEGLLSPPDLHVTLEIAEPGRRAGFAAHSQAG 423
RL L E ATLALGAALA +PG VL L G+LGAGKTTLVRGLLRALG GRVKSPTY LVE+Y +SRL+LYHFDFYRF D EW+ +GFR+ FN ++C+VEWPE A G L P DL + LE+ EPGR A A S AG
Sbjct: 13 RLDLPDEAATLALGAALAPHLVPGLVLALRGELGAGKTTLVRGLLRALGHAGRVKSPTYTLVEVYEVSRLSLYHFDFYRFHDPTEWIDAGFRDVFNGRNVCLVEWPERARGQLPPADLEIALEVTEPGRSATLTASSPAG 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17351.1.1 >prot_P-wetherbeei_contig17351.1.1 ID=prot_P-wetherbeei_contig17351.1.1|Name=mRNA_P-wetherbeei_contig17351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp MGELGFPGALQPGVFVHRRMAGDGRGTPVPARPSRHAGNRRAGSPGGLRRback to top mRNA from alignment at P-wetherbeei_contig17351:268..1205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17351.1.1 ID=mRNA_P-wetherbeei_contig17351.1.1|Name=mRNA_P-wetherbeei_contig17351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=938bp|location=Sequence derived from alignment at P-wetherbeei_contig17351:268..1205+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17351:268..1205+ >mRNA_P-wetherbeei_contig17351.1.1 ID=mRNA_P-wetherbeei_contig17351.1.1|Name=mRNA_P-wetherbeei_contig17351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig17351:268..1205+ (Phaeothamnion wetherbeei SAG_119_79)back to top |