mRNA_P-wetherbeei_contig17350.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A3D5DH20_9GAMM (Amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DH20_9GAMM) HSP 1 Score: 301 bits (770), Expect = 5.790e-97 Identity = 145/240 (60.42%), Postives = 178/240 (74.17%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
SVMAGPD RVPI+L E G F PL D++G+R AW+P+LG VD +V AVLE+ALPVF +LG +D A PDL+DA E+F RAW F A+FG D+ + +KDTV WNIE+GL LTL D+T A K + LV R+A FF +D LLCPS QVPPFP++Q+WV +ING EL TYLDWM VC+AITVTGCPAISVPAGFT SGLP+G+QIVG R D VL++A+ FE T+ RRP+L
Sbjct: 257 SVMAGPDQRVPISLSEPGIDFLGPLVCDVKGMRFAWSPDLGGNPVDPKVTAVLEQALPVFEDLGGFIDAADPDLQDAKEIFSTFRAWMFLAKFGEDYGERGHLMKDTVRWNIEEGLKLTLADLTAATTKHATLVERIAGFFDIYDILLCPSAQVPPFPLDQQWVHSINGIELETYLDWMAVCWAITVTGCPAISVPAGFTESGLPIGIQIVGARGCDRQVLEVAYAFEQVTQQARRRPAL 496
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: W4L9C8_9BACT (Amidase domain-containing protein (Fragment) n=3 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4L9C8_9BACT) HSP 1 Score: 280 bits (715), Expect = 8.370e-91 Identity = 134/240 (55.83%), Postives = 168/240 (70.00%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
S +AGPDPRVP AL FR PL RDLRG+R+AW+ +LG++ VDA + V + F +GC+++ A PDLRDAD +F+ +RA+ FA R R LK TV+WN EQGL LT D+ +AE R+ L RVAAFF H+D+L P+TQVPPF IEQE+ ING++L TY+DWMG+CYAITVTGCP+ISVP GFT GLPVGLQIVGP D+ VLQLAH FE AT ++P +
Sbjct: 91 SAIAGPDPRVPSALPFPADVFRAPLERDLRGVRVAWSRDLGRYPVDAVITRVCDAQRSTFESIGCRVEEAEPDLRDADHIFQTVRAYSFAHRHETHLAENRHQLKATVIWNAEQGLQLTALDIARAEAMRTSLYQRVAAFFEHYDYLCTPTTQVPPFSIEQEYPTEINGQQLETYIDWMGLCYAITVTGCPSISVPCGFTPDGLPVGLQIVGPPHADVDVLQLAHAFEQATMFYRQKPQV 330
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V9J156_9BACT (Amidase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9J156_9BACT) HSP 1 Score: 283 bits (723), Expect = 9.170e-90 Identity = 133/240 (55.42%), Postives = 171/240 (71.25%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
+VMAGPDPR PI++ E GA FR PL DL+G R+AW+ NLG++ V V V ++A +F +LGC +++A PD DA+E F+VLR W +A G D R +KDTV+WNIEQGL L+ D+++AE KRS L RV FF H+ FL+ P +QV PFP+E EWV+ ING ++ TY+DWM CYAIT+TG PAISVP GF+A GLP+GLQIVG QD +VLQ AH FE AT+ G RRP +
Sbjct: 268 AVMAGPDPRAPISIDEPGAVFRRPLKSDLKGARVAWSRNLGKYPVQPLVNQVCDKARQIFLDLGCHVEDAEPDFSDANEAFQVLRGWTYAQNRGEDLRTNRHLMKDTVIWNIEQGLKLSGLDISRAEAKRSMLYQRVREFFEHYQFLILPVSQVVPFPVEVEWVKEINGVKMETYIDWMATCYAITLTGLPAISVPCGFSAEGLPIGLQIVGRHHQDFSVLQAAHAFEQATQFGKRRPPI 507
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A6J4XB95_9DELT (Amidase family protein BBta_1912 n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XB95_9DELT) HSP 1 Score: 275 bits (703), Expect = 3.540e-87 Identity = 131/240 (54.58%), Postives = 166/240 (69.17%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
S +AGPDPR PIA+ E G++F PL RDL+G+R+AW+ +LG+F VD V VLE VF +LGC ++ PD RDADE+F+V RAW F + G E+QR +KDTV WNIEQG L+ ++ QAEIKR+ L RV F ++FL+CP QVPPF I Q W++ I+G ++ TY+DWM CY ITVTG PAISVP GFT GLPVG+QIVG D +VLQLAH FE AT +RP +
Sbjct: 232 STIAGPDPRSPIAIAEPGSTFTRPLVRDLKGVRIAWSKDLGEFPVDPRVTQVLENQRHVFEDLGCIVEEGQPDFRDADEIFKVWRAWSFELQLGELMENQRELMKDTVTWNIEQGQKLSGPEIGQAEIKRTELYHRVREFMETYEFLICPVNQVPPFDINQRWIEEIDGVKMETYIDWMKSCYYITVTGLPAISVPCGFTPQGLPVGIQIVGRHNADFSVLQLAHAFEKATGFWKQRPPV 471
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A076MPT3_AMYME (Amidase n=9 Tax=Pseudonocardiaceae TaxID=2070 RepID=A0A076MPT3_AMYME) HSP 1 Score: 270 bits (690), Expect = 3.010e-85 Identity = 131/241 (54.36%), Postives = 167/241 (69.29%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLG-QFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
SV+AGPDPR PIAL E G +F PL RD+RGLR+AW+P+LG V+ EV V+E + VF +LGC ++ PD ADE FR+LRAWQFA ++GP + +R +KDT+VWN E+GL L+ DV +AE+ R+ L R FF +DFLL P +QVPPF E E+ + G+++ TYLDWM Y +TV+G PA+SVPAGFT GLPVGLQIVGP D AVLQL H FE AT RRP++
Sbjct: 229 SVLAGPDPRSPIALDEPGETFARPLDRDVRGLRIAWSPDLGGSVPVEPEVADVVEASAKVFGDLGCVVERDCPDFAGADEAFRILRAWQFAVKYGPLLDTERDRIKDTIVWNTEEGLRLSATDVGRAEVLRTELFHRFREFFTRYDFLLLPVSQVPPFDAELEYPVRVAGQDMVTYLDWMRSAYFVTVSGSPALSVPAGFTPGGLPVGLQIVGPHRADFAVLQLGHAFEQATGAAQRRPAV 469
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2D5Z4A7_9BACT (Amidase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z4A7_9BACT) HSP 1 Score: 270 bits (689), Expect = 4.370e-85 Identity = 131/240 (54.58%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
S MAGPDPR PIA+ E G+ F PL RDLRG+R+AW NLG F VD+ V A ++ F +LGCK+D+ PD RDADE FRV RAW ARFGP + R KDT++WN+EQG LT + +AE KR++L RV F ++FL+ P TQVPPF + ++ I+G L TY+DWM CY ITVTG PAISVP GFT GLPVG+QIVG D VLQ+AH FE AT G RRP +
Sbjct: 229 SAMAGPDPRSPIAIREPGSVFAKPLDRDLRGVRVAWCGNLGDFPVDSRVTAAVDGERAAFEDLGCKIDDEHPDFRDADEAFRVWRAWALEARFGPMMQTHRDRFKDTIIWNVEQGAQLTGPQIARAEQKRTQLYHRVRRFMGTYEFLVLPVTQVPPFDVTCPYITEIDGVTLDTYIDWMKSCYYITVTGLPAISVPCGFTPEGLPVGVQIVGRHEDDFGVLQIAHAFEQATAVGRRRPEV 468
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A7Y4X3I6_9DELT (Amidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X3I6_9DELT) HSP 1 Score: 268 bits (685), Expect = 1.740e-84 Identity = 131/240 (54.58%), Postives = 162/240 (67.50%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
SV+AGPD R P+++ E G FR PL R+ G+R+AW+ +LG VD V AV+++ VF+ LGC +++A PDLRDADE FRV RAW F FG RAH+KDTV+WNIE+G LT + QAE KR+ L RV F ++FL+ P +QVPPF ++Q +V ING +L TYLDWM CY ITVTG PAISVP GFT GLPVG+QIVG D VLQLAH FE T G RRP +
Sbjct: 231 SVIAGPDSRAPLSISEPGERFRRPLERNFAGVRIAWSRDLGGLPVDPRVTAVIDKQRGVFAALGCAIEDAQPDLRDADETFRVWRAWLFELGFGEMLRTHRAHMKDTVIWNIEEGEKLTGPQIGQAERKRTELYQRVRQFMERYEFLILPVSQVPPFEVKQRYVTEINGVKLDTYLDWMRSCYYITVTGLPAISVPCGFTPEGLPVGVQIVGRHHDDFGVLQLAHAFEQVTGFGRRRPGV 470
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A540VCA4_9CHLR (Amidase n=2 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VCA4_9CHLR) HSP 1 Score: 266 bits (681), Expect = 7.140e-84 Identity = 130/241 (53.94%), Postives = 163/241 (67.63%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLG-QFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
S +AGPDPR PIA+ E+G F PL RD RG R+AW+P+LG F VD V + LPVF++LGC+++ A+PD RDADE F+ RAW F ++G + R +K+TVVWN+EQG LT + +AE+KR+ L RV F ++FLL P +QVPPF + QE+V ING + TY+DWM CY ITVTG PAISVP GFT GLPVGLQIVG DL VLQLA+ F+ AT RRP L
Sbjct: 231 SAIAGPDPRSPIAIAESGTKFATPLERDFRGTRIAWSPDLGGSFPVDPRVTDAIREQLPVFADLGCQVEEAAPDFRDADEAFKAWRAWAFELQYGELVKAHRDQIKETVVWNVEQGARLTGPQLGRAEVKRTALYHRVRQFMETYEFLLLPVSQVPPFDVGQEYVTEINGVAMETYIDWMKSCYYITVTGLPAISVPCGFTPEGLPVGLQIVGRHQDDLGVLQLAYAFQQATETWKRRPPL 471
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V7C8K8_9BACT (Amidase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7C8K8_9BACT) HSP 1 Score: 268 bits (685), Expect = 7.160e-84 Identity = 133/240 (55.42%), Postives = 162/240 (67.50%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
+VMAGPDPR PIA+ E G FR PL R +G+R+AW+ +LG VD V AVL+R F LGC +++ PD +A +VF+VLRA FA R+GP R +KDTVVWNIE+GL LT +++ +AE+ R+RL RV F H+FLL P+ QVPPF + Q +V ING L TY+DWM VC ITVTG PAISVPAGFT GLPVGLQIVG + VLQLAH FE AT RRP L
Sbjct: 283 AVMAGPDPRSPIAISEPGDRFRAPLDRGFKGVRIAWSRDLGGLPVDRRVTAVLDRQRATFEALGCDVEDGQPDFGEARQVFQVLRALTFATRYGPLLAQHRHQMKDTVVWNIEEGLKLTAREIGEAEVARTRLYHRVREFMERHEFLLAPAAQVPPFDVSQPYVTEINGAPLPTYIDWMRVCSDITVTGLPAISVPAGFTDEGLPVGLQIVGRHRDEWGVLQLAHAFEQATGFYRRRPPL 522
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V6W577_9BACT (Amidase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6W577_9BACT) HSP 1 Score: 266 bits (680), Expect = 9.300e-84 Identity = 130/240 (54.17%), Postives = 161/240 (67.08%), Query Frame = 1
Query: 1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
S +AGPD R PIA+ E G FR PLARD RG+R+AW+ +LG +D V A LE VF LGC +D+ PD+RDA E+F+ LRA+ FA R+GP R +KDTV+WN EQGL LT +++ AE+KR+ L RV F ++FLL P+TQVPPF + Q +V I G L TY+DWM C ITVTG PAI+VP GFT GLPVGLQIVG D VL+LAH FE AT G RRP++
Sbjct: 229 SAIAGPDARSPIAIAEPGDGFRRPLARDFRGVRVAWSRDLGGLPIDRRVTAALEPQRKVFENLGCAVDDTQPDMRDAREIFQALRAFAFATRYGPMLAEHRHQIKDTVIWNTEQGLKLTARELADAEVKRTALYHRVREFMERYEFLLLPTTQVPPFDVAQPYVTEIEGAALPTYIDWMRSCSDITVTGLPAIAVPGGFTPDGLPVGLQIVGRHQNDWGVLELAHAFEQATGVGLRRPAV 468 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17350.1.1 >prot_P-wetherbeei_contig17350.1.1 ID=prot_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVback to top mRNA from alignment at P-wetherbeei_contig17350:714..1436- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17350.1.1 ID=mRNA_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig17350:714..1436- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17350:714..1436- >mRNA_P-wetherbeei_contig17350.1.1 ID=mRNA_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig17350:714..1436- (Phaeothamnion wetherbeei SAG_119_79)back to top |