mRNA_P-wetherbeei_contig17334.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17334.1.1
Unique NamemRNA_P-wetherbeei_contig17334.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537SW91_9PROT (SDR family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SW91_9PROT)

HSP 1 Score: 400 bits (1028), Expect = 5.590e-138
Identity = 201/263 (76.43%), Postives = 223/263 (84.79%), Query Frame = 1
Query:    1 CGREEKTMPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            C      MPKTPDYF GKTI+ITGAASGIGRA A IFAREGANVVCAD N +G +ETAA +   G + LALT DVTSR+QV+DM+ RA++ FG VQF FNSAGAA+RR+KFL+IDDAL E TF LN KGTLY MQAVLPHML N+ GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA  GIR LSISPGP+RTPFQ AA TSPEL Q+FL+DVPM+RFGEPEEI ELVLFMCSDAC FMTADTVY NGGGGWR
Sbjct:   68 CSSRSHAMPKTPDYFVGKTIIITGAASGIGRAAAKIFAREGANVVCADINGEGAKETAAEIVAHGGKTLALTSDVTSRRQVNDMVHRAIETFGQVQFQFNSAGAALRRSKFLDIDDALFENTFALNVKGTLYCMQAVLPHMLENRHGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPIRTPFQSAAQTSPELMQRFLEDVPMQRFGEPEEIAELVLFMCSDACPFMTADTVYANGGGGWR 330          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537PEI4_9PROT (SDR family oxidoreductase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PEI4_9PROT)

HSP 1 Score: 399 bits (1025), Expect = 7.680e-138
Identity = 202/257 (78.60%), Postives = 223/257 (86.77%), Query Frame = 1
Query:   19 TMPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            +MPKTPDYF GKTI+ITGAASGIGRA +LIFAREG NVVCAD N DG +ETA  V  +G +ALAL  DVTSR+QV+DM+ RA++ FGSVQF FNSAGAA+RR+ FL+IDDAL E TF LN KGTLY MQAVLPHML N  GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA  GIR LSISPGP+RTPFQ AA T PEL Q+FLDDVPMKRFGEPEEIGEL+LFMCSDAC FMTADTVYVNGGGGWR
Sbjct:   53 SMPKTPDYFVGKTIIITGAASGIGRAASLIFAREGTNVVCADINIDGAKETAKQVVAQGGKALALATDVTSRRQVNDMVHRAIETFGSVQFQFNSAGAALRRSTFLDIDDALFESTFALNVKGTLYCMQAVLPHMLENGQGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPIRTPFQSAAQTPPELIQRFLDDVPMKRFGEPEEIGELLLFMCSDACHFMTADTVYVNGGGGWR 309          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537V580_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537V580_9PROT)

HSP 1 Score: 392 bits (1008), Expect = 4.570e-136
Identity = 198/256 (77.34%), Postives = 220/256 (85.94%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            M KTP+YF GKTI+ITGAASGIGRA ALIFAREGANVVC D N DG ++TA  V  +G +AL L  DVTSRK V++MI+RA+D FG+VQF FNSAGAA+RR+KFL+IDDAL + TF LN KGT + MQA+LPHML N  GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA  GIR LSISPGPVRTPFQ AA TSPEL Q+FLDDVPMKRFGEPEEI ELVLFMCSDAC FMTADTVYVNGGGGWR
Sbjct:    1 MSKTPEYFVGKTIIITGAASGIGRAAALIFAREGANVVCVDINADGTQQTAERVIAQGGKALVLRTDVTSRKDVNEMIRRAIDTFGNVQFQFNSAGAALRRSKFLDIDDALFDDTFSLNVKGTFHCMQAILPHMLENGHGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPVRTPFQSAAQTSPELMQRFLDDVPMKRFGEPEEIAELVLFMCSDACAFMTADTVYVNGGGGWR 256          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A0Q7TT49_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TT49_9HYPH)

HSP 1 Score: 372 bits (955), Expect = 5.530e-128
Identity = 197/258 (76.36%), Postives = 221/258 (85.66%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNG--KGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MPK+PDYF GKTIVITGA SGIGRATALIFAREGANVVCAD +E  V +T  +++   KG ++LAL +DVT R  V++MI+ AV  FGSVQFLFNSAG+A+RRAKFL+IDD L + TFDLN KGT Y MQAVLPHMLAN+FGVIVNVGSMAHRRGG GSS+HYA+AKGAVVTMTMGVAREFA QGIRALSISPGP+ T FQ A+ TSPEL  + L DVPMKRFG PEEIGELVLFMCSDAC +MTADTVYVNGGGG+R
Sbjct:    1 MPKSPDYFKGKTIVITGAGSGIGRATALIFAREGANVVCADIDEAAVAQTVEMIDAAYKG-KSLALGIDVTERAAVNNMIELAVGDFGSVQFLFNSAGSAMRRAKFLDIDDDLFDATFDLNVKGTFYAMQAVLPHMLANRFGVIVNVGSMAHRRGGGGSSVHYASAKGAVVTMTMGVAREFATQGIRALSISPGPLDTNFQIASQTSPELKAQMLADVPMKRFGRPEEIGELVLFMCSDACEYMTADTVYVNGGGGFR 257          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: UPI00165CC341 (SDR family oxidoreductase n=1 Tax=Siccirubricoccus phaeus TaxID=2595053 RepID=UPI00165CC341)

HSP 1 Score: 372 bits (954), Expect = 7.570e-128
Identity = 188/256 (73.44%), Postives = 216/256 (84.38%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MPKTPDYF GKTI+ITGAASGIGRATALIFAREGANVV AD +  G +  A  +  +GS+AL +  DVTSR QV+++++RA+  FG V FLFNSAG+A RR KFLEIDD L+E+TFDLN KGT + MQAVLPHML N  GVIVNV SM+H+RGGPG+S+HYAAAKGAV+TMT+GVAREFA +GIR LSISPGPV TPF  AA T PEL +KF++DVPMKR  EPEEIGELVLFMCSDACG+MTADTVYVNGGGGWR
Sbjct:    1 MPKTPDYFHGKTIIITGAASGIGRATALIFAREGANVVVADVDAAGSQAVADALRQRGSKALPVATDVTSRPQVEELVRRAIAEFGRVDFLFNSAGSAFRRCKFLEIDDQLLERTFDLNVKGTFHAMQAVLPHMLENGQGVIVNVASMSHKRGGPGASVHYAAAKGAVLTMTLGVAREFADRGIRCLSISPGPVNTPFAMAADTPPELVRKFVEDVPMKRMAEPEEIGELVLFMCSDACGYMTADTVYVNGGGGWR 256          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A8J2ZEY4_9PROT (Short chain dehydrogenase n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZEY4_9PROT)

HSP 1 Score: 368 bits (944), Expect = 2.520e-126
Identity = 186/256 (72.66%), Postives = 216/256 (84.38%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MP+TPDYF G+TIVITGAASGIGRATALIFAREGANVVCAD + +G R TA  V   G++ L +  DVTSR QV+ +I+RA++ FG V FLFNSAGAA RR  FLEIDD L+E+TFDLN KGT Y MQAVLPHML N  GVIVN+ SM+H+RGGPG+S+HYA+AKGAV+TMT+GVAREFA +GIRA+SISPGPV TPF  AA T PEL ++F++DVPMKR  EPEEIGELVLF+CSDAC +MTADTVYVNGGGGWR
Sbjct:    1 MPRTPDYFHGRTIVITGAASGIGRATALIFAREGANVVCADVDAEGARRTAEGVAQLGAKGLGVATDVTSRAQVNALIRRAIEEFGRVDFLFNSAGAAGRRCGFLEIDDELLERTFDLNVKGTFYAMQAVLPHMLENGAGVIVNMASMSHKRGGPGASVHYASAKGAVLTMTLGVAREFADRGIRAISISPGPVNTPFARAANTPPELIRRFVEDVPMKRMAEPEEIGELVLFLCSDACPYMTADTVYVNGGGGWR 256          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537NNF6_9PROT (SDR family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NNF6_9PROT)

HSP 1 Score: 360 bits (925), Expect = 1.430e-123
Identity = 181/247 (73.28%), Postives = 213/247 (86.23%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTV 762
            M KTPDYF GKTI++TGAASGIG+ATALIFAREGA+VVCAD   DG +E A  +   G +AL L +DVTSR+QVD+M+++++ AFGSVQF FNSAGAA+RR+KFL+IDDAL +KTF LN KGT Y MQA+LPHM  N  GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV++TMGVAREFA  GIR +SISPGP+RTPFQ +A TSPEL Q+FL+DVPMKRFGEP+EIGELVLF+CSDAC FMTA+TV
Sbjct:    1 MAKTPDYFVGKTIIVTGAASGIGKATALIFAREGASVVCADLIGDGAQEIAKEIRHHGGKALGLAIDVTSREQVDEMVEQSIAAFGSVQFQFNSAGAALRRSKFLDIDDALFDKTFSLNVKGTFYCMQAILPHMQRNGAGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSLTMGVAREFAHTGIRCVSISPGPIRTPFQASAQTSPELMQRFLEDVPMKRFGEPDEIGELVLFICSDACPFMTAETV 247          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A2E7UYV9_9RICK (Short-chain dehydrogenase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7UYV9_9RICK)

HSP 1 Score: 359 bits (921), Expect = 7.960e-123
Identity = 186/256 (72.66%), Postives = 213/256 (83.20%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MPKTP++F  KTIVITGAASGIGR+TA IFAREGANVVC D + +G   TA  +  KG +AL L  DVT R+QVD MI+RA++ FGSV+F FNSAGAA RR+ FL+ID+ L ++TFDLN K   + MQAVLPHML N  GVIVNV SM+H+RG PGSSIHYAAAKGAVVTMT+GVAREFA +GIR LSISPGPVRT FQ+AA TSPEL ++F +DVPMKRF EPEEIGELVLFMCSDAC +MTADTVYVNGGGGWR
Sbjct:    1 MPKTPEFFVEKTIVITGAASGIGRSTAQIFAREGANVVCGDIDAEGAGRTANQIIQKGGRALGLACDVTKREQVDVMIQRAIEEFGSVEFQFNSAGAAGRRSTFLDIDNDLWDQTFDLNAKSVYHSMQAVLPHMLENGGGVIVNVASMSHKRGAPGSSIHYAAAKGAVVTMTLGVAREFADRGIRCLSISPGPVRTAFQEAAKTSPELMERFKNDVPMKRFAEPEEIGELVLFMCSDACEYMTADTVYVNGGGGWR 256          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: UPI001AE0411F (SDR family oxidoreductase n=1 Tax=Roseomonas sp. SG15 TaxID=2820811 RepID=UPI001AE0411F)

HSP 1 Score: 356 bits (913), Expect = 1.310e-121
Identity = 179/256 (69.92%), Postives = 212/256 (82.81%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MPK PD+F  +TI+ITGAASGIGRATALIFAREGA V+ AD + +G + T   V  +G +A  L+ DV SR+QV+ ++   +   G V FLFN AG+A++R KFLEIDDAL++KTFDLNFKGT Y MQAVLPHML N  GVIVNV SM+H+RGGPG+S+HYAAAKGAV+TMT+GVAREFA +GIRALSISPGPV TPF  AA+TSP+L +KF++DVPMKR  EPEEIGELVLFMCSDAC FMTADTVYV+GGGGWR
Sbjct:    1 MPKDPDFFRDRTIIITGAASGIGRATALIFAREGAKVMVADVDTEGGQTTVEAVISRGGRASFLSTDVCSRQQVEALVAETITQLGKVDFLFNCAGSALKRCKFLEIDDALMDKTFDLNFKGTFYAMQAVLPHMLENGKGVIVNVASMSHKRGGPGASVHYAAAKGAVLTMTLGVAREFADRGIRALSISPGPVNTPFATAASTSPDLVRKFVEDVPMKRMAEPEEIGELVLFMCSDACEFMTADTVYVSGGGGWR 256          
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A2E5PGM9_9PROT (Short-chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PGM9_9PROT)

HSP 1 Score: 355 bits (911), Expect = 2.640e-121
Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1
Query:   22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
            MPKTPDYF  KTIVITGA SGIGRATAL+FAREGANV+CAD N D  +ET   VN  G+QALA + DV +R  V++M+  A  A+G + FLFNSAG+A+RR+ F+EIDD L ++T+D+N  G  YGMQA LPHML    GVIVN+ SM+H+RGGPG+SIHYA+AKGAV TMT+GVAREFA+QGIR +SISPGPV T FQ +AATS  L ++F +DVPMKRFG+PEEI ELVLFMCSDAC FMTADTVYVNGGGGWR
Sbjct:    1 MPKTPDYFQNKTIVITGAGSGIGRATALVFAREGANVLCADINGDAAQETVTQVNDSGAQALATSTDVRNRTAVEEMVDAAKSAYGGIDFLFNSAGSAVRRSTFMEIDDDLWKETYDINVNGVFYGMQAALPHMLETGKGVIVNMASMSHKRGGPGTSIHYASAKGAVFTMTLGVAREFASQGIRCMSISPGPVETAFQRSAATSEALMEQFRNDVPMKRFGQPEEIAELVLFMCSDACEFMTADTVYVNGGGGWR 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537SW91_9PROT5.590e-13876.43SDR family oxidoreductase (Fragment) n=1 Tax=Alpha... [more]
A0A537PEI4_9PROT7.680e-13878.60SDR family oxidoreductase n=4 Tax=Alphaproteobacte... [more]
A0A537V580_9PROT4.570e-13677.34SDR family oxidoreductase n=1 Tax=Alphaproteobacte... [more]
A0A0Q7TT49_9HYPH5.530e-12876.36Uncharacterized protein n=1 Tax=Pseudolabrys sp. R... [more]
UPI00165CC3417.570e-12873.44SDR family oxidoreductase n=1 Tax=Siccirubricoccus... [more]
A0A8J2ZEY4_9PROT2.520e-12672.66Short chain dehydrogenase n=1 Tax=Caldovatus sedim... [more]
A0A537NNF6_9PROT1.430e-12373.28SDR family oxidoreductase (Fragment) n=1 Tax=Alpha... [more]
A0A2E7UYV9_9RICK7.960e-12372.66Short-chain dehydrogenase n=4 Tax=Alphaproteobacte... [more]
UPI001AE0411F1.310e-12169.92SDR family oxidoreductase n=1 Tax=Roseomonas sp. S... [more]
A0A2E5PGM9_9PROT2.640e-12169.14Short-chain dehydrogenase n=1 Tax=Rhodospirillacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17334contigP-wetherbeei_contig17334:550..1341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog935836.JAEL01000015_gene223
Model size792
Max annot lvl935836.JAEL01000015_gene223|-
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.65e-58
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1UV88@1239|Firmicutes,4I3D4@91061|Bacilli,1ZBW3@1386|Bacillus
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size771
COG categoryIQ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186114.5071025-UTR-P-wetherbeei_contig17334:549..5701683186114.5071025-UTR-P-wetherbeei_contig17334:549..570Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17334 550..570 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186114.5176194-CDS-P-wetherbeei_contig17334:570..13411683186114.5176194-CDS-P-wetherbeei_contig17334:570..1341Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17334 571..1341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17334.1.1prot_P-wetherbeei_contig17334.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17334 571..1341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17334.1.1

>prot_P-wetherbeei_contig17334.1.1 ID=prot_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRET
AALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIR
RAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAH
RRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQD
AAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVN
GGGGWR*
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mRNA from alignment at P-wetherbeei_contig17334:550..1341+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17334.1.1 ID=mRNA_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig17334:550..1341+ (Phaeothamnion wetherbeei SAG_119_79)
TGCGGGCGGGAGGAAAAAACCATGCCGAAGACGCCGGATTATTTTGCGGG CAAGACCATTGTCATCACCGGCGCCGCGAGCGGCATCGGCCGGGCCACGG CGCTGATTTTCGCGCGCGAGGGCGCCAACGTGGTCTGCGCCGACAGGAAC GAGGACGGCGTGCGCGAGACCGCCGCGCTGGTCAACGGCAAGGGCAGCCA GGCGCTGGCGCTGACGGTCGACGTGACGTCGCGAAAGCAGGTCGACGACA TGATCAAGCGCGCGGTCGATGCCTTTGGCAGCGTGCAGTTCCTGTTCAAC TCGGCCGGAGCCGCGATCCGCCGCGCCAAATTCCTCGAGATCGACGACGC GCTGATCGAAAAGACCTTCGACCTTAATTTCAAGGGCACGCTCTACGGCA TGCAGGCGGTGCTGCCGCACATGCTGGCCAACAAGTTCGGCGTCATCGTC AACGTCGGCAGCATGGCGCACCGACGCGGCGGCCCGGGCTCCTCCATCCA TTACGCGGCGGCCAAGGGCGCGGTCGTCACCATGACGATGGGCGTCGCGC GCGAGTTCGCGGCGCAGGGCATCCGCGCGCTGTCGATCTCGCCCGGCCCG GTCAGGACGCCGTTCCAGGACGCGGCCGCGACCTCGCCGGAACTGGCGCA GAAATTCCTCGACGACGTGCCGATGAAGCGCTTCGGCGAGCCGGAGGAGA TCGGCGAACTGGTGCTGTTCATGTGCTCGGACGCCTGCGGGTTCATGACG GCGGATACGGTTTACGTGAACGGCGGCGGCGGCTGGCGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17334:550..1341+

>mRNA_P-wetherbeei_contig17334.1.1 ID=mRNA_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig17334:550..1341+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAAGACGCCGGATTATTTTGCGGGCAAGACCATTGTCATCACCGG
CGCCGCGAGCGGCATCGGCCGGGCCACGGCGCTGATTTTCGCGCGCGAGG
GCGCCAACGTGGTCTGCGCCGACAGGAACGAGGACGGCGTGCGCGAGACC
GCCGCGCTGGTCAACGGCAAGGGCAGCCAGGCGCTGGCGCTGACGGTCGA
CGTGACGTCGCGAAAGCAGGTCGACGACATGATCAAGCGCGCGGTCGATG
CCTTTGGCAGCGTGCAGTTCCTGTTCAACTCGGCCGGAGCCGCGATCCGC
CGCGCCAAATTCCTCGAGATCGACGACGCGCTGATCGAAAAGACCTTCGA
CCTTAATTTCAAGGGCACGCTCTACGGCATGCAGGCGGTGCTGCCGCACA
TGCTGGCCAACAAGTTCGGCGTCATCGTCAACGTCGGCAGCATGGCGCAC
CGACGCGGCGGCCCGGGCTCCTCCATCCATTACGCGGCGGCCAAGGGCGC
GGTCGTCACCATGACGATGGGCGTCGCGCGCGAGTTCGCGGCGCAGGGCA
TCCGCGCGCTGTCGATCTCGCCCGGCCCGGTCAGGACGCCGTTCCAGGAC
GCGGCCGCGACCTCGCCGGAACTGGCGCAGAAATTCCTCGACGACGTGCC
GATGAAGCGCTTCGGCGAGCCGGAGGAGATCGGCGAACTGGTGCTGTTCA
TGTGCTCGGACGCCTGCGGGTTCATGACGGCGGATACGGTTTACGTGAAC
GGCGGCGGCGGCTGGCGCTAG
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