mRNA_P-wetherbeei_contig17332.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A1Z5JKK0_FISSO (Small subunit ribosomal protein S15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKK0_FISSO) HSP 1 Score: 96.3 bits (238), Expect = 4.730e-22 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 43 SPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGL 348
S VQ++ L+NAS +R+ + K+ +M F RP DTG+S VQIAAL+ RI HM ++ KD +KRG+EAL RRRK+L YL+R DF YR VV LGL
Sbjct: 139 SERVQKLFDLQNASQMERIKSQKQKVMQIFQYRPGDTGSSAVQIAALSTRIQQMQAHMTKHKKDKHSKRGMEALFSRRRKMLDYLERKDFESYRRVVKALGL 240
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A2S5QX86_9PROT (30S ribosomal protein S15 n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=A0A2S5QX86_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 2.740e-21 Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 100 AADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
AAD+ ++S+F T P+DTG+ +VQ+A LT RI Y T H N KDN ++RGL ALV +RR+LL YLK D RY+ ++ RLGLR
Sbjct: 5 AADRAKIVSEFQTAPKDTGSPEVQVALLTSRIAYLTEHFKSNKKDNHSRRGLLALVSQRRRLLDYLKSKDVTRYQALIGRLGLR 88
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A7S2FKX4_9STRA (30S ribosomal protein S15 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKX4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.080e-20 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 7 KYFISNERAAATSPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGL 348
++ I E S V+RVLS+ NAS + A + F +RP DTG++ VQ+A LTV+I H+ ++ KDN +KRGL LV +RRKLL YLKRTDF YR V L L
Sbjct: 19 RFGIKPETVPEVSEAVRRVLSMANASNAEVTQAKVARAIEAFASRPGDTGSTPVQVAVLTVKIENVRAHLKQHVKDNPSKRGLVMLVNKRRKLLKYLKRTDFDSYRRTVYSLNL 132
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A2N2S9F8_9PROT (30S ribosomal protein S15 n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2N2S9F8_9PROT) HSP 1 Score: 87.0 bits (214), Expect = 4.470e-20 Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 100 AADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
AAD+ ++S++ P+DTG+ +VQ+A LT RITY T H N KD+ ++RGL A+V +RRKLL YLKR RY+ ++ RLG+R
Sbjct: 5 AADRAKIVSEYQQAPKDTGSPEVQVALLTSRITYLTEHFKSNKKDHHSRRGLLAMVSQRRKLLDYLKRNSVERYQTLIGRLGIR 88
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: H3HBC0_PHYRM (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3HBC0_PHYRM) HSP 1 Score: 87.8 bits (216), Expect = 1.560e-19 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 19 SNERAAATSPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
++E T ++ VLSL NAS + A A + F P DTG+S+VQ+A LT +I +T H + KD+ ++RGL A+V++RRKLL YL+R D +YR+VV LGLR
Sbjct: 51 ADEEEEKTLMQLKAVLSLRNASQHELNKAQVAAAIDTFQRFPGDTGSSEVQVAVLTQKILRSTTHAQGHKKDHHSRRGLIAMVEKRRKLLKYLRRKDLHKYREVVAALGLR 161
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A426WGK0_9GAMM (30S ribosomal protein S15 n=6 Tax=Bacteria TaxID=2 RepID=A0A426WGK0_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 1.810e-19 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 100 AADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
A DKKA++ ++ P DTG+ +VQ+A LT RITY T H ++ +D+ +++GL +V RRKLL YLK D RYRD++ RLGLR
Sbjct: 5 AEDKKAIVEEYKRGPGDTGSPEVQVALLTSRITYLTEHFKQHKQDHHSRQGLVRMVNSRRKLLDYLKSKDAERYRDLISRLGLR 88
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A3M6VF71_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF71_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.110e-19 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 22 NERAAATSPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
+E+ A ++ VLSL NAS + A + F P DTG+S+VQIA LT +I +T H + KD+ ++RGL A+V++RRKLL YL+R D ++RDVV LGLR
Sbjct: 50 DEKEEAAFEQLKAVLSLRNASQHELNKAQVATAIETFQRFPGDTGSSEVQIAVLTQKILRSTTHAQGHKKDHHSRRGLIAMVEKRRKLLKYLRRKDLHKFRDVVAALGLR 159
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A225W7Y7_9STRA (Ribosomal protein S15 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W7Y7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.110e-19 Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 22 NERAAATSPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
+E T ++ VLSL NAS + A + F P DTG+S+VQ+A LT +I T H +N KD+ ++RGL A+V++RRKLL YL+R D +YR+VV LGLR
Sbjct: 50 DEAEEQTLNQLKAVLSLRNASQHELNKAQVATAIQTFQRFPGDTGSSEVQVAVLTQKILRCTAHAQQNKKDHHSRRGLIAMVEKRRKLLKYLRRKDLHKYREVVAALGLR 159
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A8F7ZIC9_9HYPH (30S ribosomal protein S15 n=1 Tax=Methylovirgula sp. HY1 TaxID=2822761 RepID=A0A8F7ZIC9_9HYPH) HSP 1 Score: 85.1 bits (209), Expect = 2.560e-19 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 100 AADKKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
A K+AL+ + P DTG+ +VQ+A LT RITY T H + KDN ++RGL LV +RR+LL Y+KR D PRYR ++ RLG+R
Sbjct: 5 AERKQALIKDYANAPGDTGSPEVQVAILTERITYLTEHFKTHIKDNHSRRGLLKLVSQRRQLLDYVKRKDEPRYRSLIERLGIR 88
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Match: A0A348XL47_9BACT (30S ribosomal protein S15 n=1 Tax=Lentisphaeria bacterium TaxID=2053569 RepID=A0A348XL47_9BACT) HSP 1 Score: 85.1 bits (209), Expect = 2.560e-19 Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 109 KKALMSQFMTRPEDTGASDVQIAALTVRITYATNHMGRNHKDNRTKRGLEALVQRRRKLLIYLKRTDFPRYRDVVMRLGLR 351
K ++ ++ R DTG+SDVQ+A LT RI T HM N KDN T+RGL+ LVQRR+K L YL RT RYR+++ +LGLR
Sbjct: 8 KAEVIKEYALRGGDTGSSDVQVAVLTHRIKELTEHMKANKKDNHTRRGLQLLVQRRKKHLKYLSRTQHDRYRELIQKLGLR 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17332.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17332.1.1 >prot_P-wetherbeei_contig17332.1.1 ID=prot_P-wetherbeei_contig17332.1.1|Name=mRNA_P-wetherbeei_contig17332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp SFKYFISNERAAATSPPVQRVLSLENASTWDRMAADKKALMSQFMTRPEDback to top mRNA from alignment at P-wetherbeei_contig17332:858..1370+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17332.1.1 ID=mRNA_P-wetherbeei_contig17332.1.1|Name=mRNA_P-wetherbeei_contig17332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig17332:858..1370+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17332:858..1370+ >mRNA_P-wetherbeei_contig17332.1.1 ID=mRNA_P-wetherbeei_contig17332.1.1|Name=mRNA_P-wetherbeei_contig17332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig17332:858..1370+ (Phaeothamnion wetherbeei SAG_119_79)back to top |