mRNA_P-wetherbeei_contig17328.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A7S2BKS8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BKS8_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.160e-39 Identity = 64/119 (53.78%), Postives = 80/119 (67.23%), Query Frame = 1
Query: 25 REWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNP-AGPGPR--CFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGY-QSVCPTGCGHRCNF 369
REWY Y+ +LHRL LW ANELI + D A++ MN+ T ++ +C+ CR P G C KC A +S C LC PVRG+YV C GCGHGGHL H+QQWF Q+VC +GCGHRC+F
Sbjct: 69 REWYWWYIQVLHRLQLWLPANELIQGSTDPAIQEMNKKSTSIYASCANCRKPLVGMESHTWCAKCRAAVSTCVLCHLPVRGMYVVCPGCGHGGHLKHLQQWFSKGQNVCASGCGHRCDF 187
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A7S3UQZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQZ1_HETAK) HSP 1 Score: 143 bits (361), Expect = 9.630e-39 Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 1 LGLEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGPGPR---CFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRC 363
LG+ VREWY++Y++IL RLGL +AANELI+ + D VR N T ++ C RCR P GP+ C KC A CALCQ P +GLY+ C GC HGGHL+ +Q+WF Y++ CP GCGHRC
Sbjct: 222 LGIPKKRVREWYLSYIEILQRLGLCQAANELINLSSDEVVRQQNAKSTTIYTACGRCRKPL-IGPQSFWCTKCKASAGLCALCQQPCKGLYISCPGCSHGGHLNCLQEWFSYETACPAGCGHRC 344
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A4D9DDY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDY3_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.780e-38 Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query: 1 LGLEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGPG-------------------------PRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCN 366
+G P VRE YV Y+++L RL LW+ ANEL+ +D + + + T ++ C++CR P GPG P C KC A++S+CALC PVRG+YVWC GCGHGGH+ H+Q+WF S CPTGCGHRC+
Sbjct: 866 IGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAACAQCRRPLGPGSGGTKGVMPASSPGSATSSLTPTSSPWCGKCRALVSQCALCLQPVRGVYVWCPGCGHGGHIDHLQEWFAANSECPTGCGHRCH 1012
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: I2CPR4_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPR4_NANGC) HSP 1 Score: 130 bits (327), Expect = 1.380e-36 Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 49 DILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGPG-------------------------PRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCN 366
++L RL LW+ ANEL+ +D + + + T ++ C++CR P GPG P C KC A++S+CALC PVRG+YVWC GCGHGGH+ H+Q+WF S CPTGCGHRC+
Sbjct: 1 ELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAACAQCRRPLGPGSGGTKGVMSASSPGSATSSSTPTPSPWCGKCRALVSQCALCLQPVRGVYVWCPGCGHGGHIDHLQEWFAANSECPTGCGHRCH 131
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A8B8EP92_CRAVI (GATOR complex protein WDR24 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EP92_CRAVI) HSP 1 Score: 135 bits (340), Expect = 1.790e-34 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 7 LEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGP-GPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
+EP + W+++Y+D+L R LW AN++I V S+N+ T +HVNC RC P G C +C V++ C++C PV+GL++WC GC HGGHL H+++WFG CPTGCGH C F
Sbjct: 647 IEPEVQENWFLSYLDLLARFQLWTTANKIIKLCHLPIVSSLNQQSTRIHVNCHRCNRPLQRVGWLCDRCKLVINNCSVCHLPVKGLFIWCQGCSHGGHLGHIKEWFGVNRQCPTGCGHLCEFT 769
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A2D4NKQ3_9SAUR (Uncharacterized protein (Fragment) n=2 Tax=Micrurus spixii TaxID=129469 RepID=A0A2D4NKQ3_9SAUR) HSP 1 Score: 130 bits (328), Expect = 2.170e-34 Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 4 GLEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNP-AGPGPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
G++ WY++Y+D+L R LW +NE+I + A+ +N+A T +H+NCS C+ P + G C +C S CA+C V+GL+VWC GC HGGHL H+ +W S CPTGCGH C +
Sbjct: 226 GIDDQTQEHWYMSYIDLLQRFQLWNISNEVIKLSTCRAIHCLNQASTTLHINCSSCKRPMSNKGWICDRCRQCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLETSSHCPTGCGHLCEYT 349
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: K1PPL2_CRAGI (GATOR complex protein WDR24 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1PPL2_CRAGI) HSP 1 Score: 134 bits (337), Expect = 4.560e-34 Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 7 LEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGP-GPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
+EP + W+++Y+D+L R LW +N++I V S+N+ T +HVNC RC P G C +C V++ C++C PV+GL++WC GC HGGHL H+++WFG CPTGCGH C F
Sbjct: 642 IEPEVQENWFLSYLDLLARFQLWTTSNKIIKLCHLPLVSSLNQQSTRIHVNCHRCNRPLQRVGWLCDRCKLVINNCSVCHLPVKGLFIWCQGCSHGGHLGHIKEWFGENKQCPTGCGHLCEFT 764
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A401RSQ4_CHIPU (Uncharacterized protein (Fragment) n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RSQ4_CHIPU) HSP 1 Score: 128 bits (322), Expect = 7.460e-34 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 7 LEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGP-GPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
++ WY +Y+D+L R LW ANE+I + ++ +N+A T +HVNC+ C+ P G C +C S CA+C V+GL+VWC GC HGGHL H+ WF + + CPTGCGH C +
Sbjct: 187 IDEQTQEHWYTSYIDLLQRFQLWNVANEVIKLSTCRSITCLNQASTTLHVNCNNCKRPMNTRGWMCERCRRGASICAVCHHAVKGLFVWCQGCTHGGHLQHLMDWFQFHTHCPTGCGHLCEYT 309
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A6P9BXT2_PANGU (GATOR complex protein WDR24 n=3 Tax=Colubroidea TaxID=34989 RepID=A0A6P9BXT2_PANGU) HSP 1 Score: 131 bits (330), Expect = 1.330e-33 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 4 GLEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNP-AGPGPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
G++ WY++Y+D+L R LW +NE+I + AV +N+A T +H+NCS C+ P + G C +C S CA+C V+GL+VWC GC HGGHL H+ +W S CPTGCGH C +
Sbjct: 398 GIDDQTQEHWYMSYIDLLQRFQLWNISNEVIKLSTCRAVHCLNQASTTLHINCSNCKRPMSNKGWICDRCRQCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLETSSHCPTGCGHLCEYT 521
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Match: A0A4W3HJU1_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3HJU1_CALMI) HSP 1 Score: 127 bits (318), Expect = 2.420e-33 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 7 LEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMHVNCSRCRNPAGP-GPRCFKCAAVLSRCALCQGPVRGLYVWCLGCGHGGHLSHMQQWFGYQSVCPTGCGHRCNFV 372
++ WY++Y+D+L R LW ANE+I + +V +N+A T +H+NCS CR P G C +C S CA+C V+GL+VWC C HGGHL H+++WF + CP GCGH C +
Sbjct: 178 IDEQTQEHWYMSYIDLLQRFRLWNVANEVIKLSPCRSVSGLNQASTTLHINCSNCRRPMNRRGWVCERCRHRASSCAICHHAVKGLFVWCQACAHGGHLQHIREWFQLHAHCPAGCGHLCEYT 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17328.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17328.1.1 >prot_P-wetherbeei_contig17328.1.1 ID=prot_P-wetherbeei_contig17328.1.1|Name=mRNA_P-wetherbeei_contig17328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp LGLEPGLVREWYVTYVDILHRLGLWKAANELISQADDVAVRSMNRAGTGMback to top mRNA from alignment at P-wetherbeei_contig17328:37..764+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17328.1.1 ID=mRNA_P-wetherbeei_contig17328.1.1|Name=mRNA_P-wetherbeei_contig17328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=728bp|location=Sequence derived from alignment at P-wetherbeei_contig17328:37..764+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17328:37..764+ >mRNA_P-wetherbeei_contig17328.1.1 ID=mRNA_P-wetherbeei_contig17328.1.1|Name=mRNA_P-wetherbeei_contig17328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig17328:37..764+ (Phaeothamnion wetherbeei SAG_119_79)back to top |