mRNA_P-wetherbeei_contig173.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: D8LIZ8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ8_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.230e-48 Identity = 83/110 (75.45%), Postives = 98/110 (89.09%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEWLTK 330
MPVLTF+ARVMDGLLLVASMD+ SD+ VDV RSQAKQILKRLNPRSVAKCSIESRPY+FHYMIEQGICYLTL ++ YPKRLAFLYLE++H+ F+ +L+++YG +W K
Sbjct: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELRQDYGEDWRNK 110
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A835Z3W0_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W0_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.770e-47 Identity = 81/110 (73.64%), Postives = 100/110 (90.91%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEWLTK 330
MP+LTF+ARV+DGLLLVAS+D +++Q+A DVYRSQAKQI+K+LNPRS AKCSI S P MFHYMIEQGICYLTLTD+ YPKRLAFLYLE++HEAFIE+L+R++G +W T+
Sbjct: 1 MPLLTFVARVIDGLLLVASIDPVTESQEAADVYRSQAKQIIKQLNPRSEAKCSIVSEPMMFHYMIEQGICYLTLTDKGYPKRLAFLYLEELHEAFIEELQRDHGMDWRTQ 110
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A6V1P6Q6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6Q6_HETAK) HSP 1 Score: 160 bits (406), Expect = 4.170e-42 Identity = 76/114 (66.67%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASS----DNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEWLTK 330
MP+LTF+ARVMDGL+LVASMD SS + +D+ +S AK+ILK+LNPRSVAKCSI+S ++FHYMIE GICYLTLTD+ YPKRLAFLYLE++HEAF+E+L+R+ G+EW +K
Sbjct: 1 MPMLTFVARVMDGLILVASMDTSSMGDARGHEKIDMCKSDAKKILKKLNPRSVAKCSIDSGQFIFHYMIEDGICYLTLTDKGYPKRLAFLYLEEIHEAFVEELQRDEGSEWRSK 114
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A6G0WBK5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBK5_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.320e-39 Identity = 68/107 (63.55%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
MP+LTF+ARV DG+LLVASM+++ D D +D Y+ Q KQI+K+LN RS AKCSI+S Y FHY+IE GICYLTL+DR YPKRLAFLYL+D+H AF+++L R++G+ W
Sbjct: 1 MPILTFLARVSDGMLLVASMESAGDYSDNLDTYKQQGKQIMKKLNQRSPAKCSIDSGAYAFHYLIEDGICYLTLSDRQYPKRLAFLYLDDIHRAFVDELARDHGDSW 107
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A485KKL0_9STRA (Aste57867_8523 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KKL0_9STRA) HSP 1 Score: 152 bits (383), Expect = 6.750e-39 Identity = 67/107 (62.62%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
MP+LTFIARV DG+LLVASM+++ D D +D Y+ Q KQI+K+LN RS KCSI+S Y FHY+IE+G+CYLTL+D+ YPKRLAFLYLED+H FI++L+R++G+ W
Sbjct: 1 MPILTFIARVSDGMLLVASMESAGDYSDNLDTYKQQGKQIMKKLNQRSPGKCSIDSGGYSFHYLIEEGVCYLTLSDKNYPKRLAFLYLEDIHAGFIDELQRDHGDSW 107
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A067CJ44_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ44_SAPPC) HSP 1 Score: 150 bits (378), Expect = 3.450e-38 Identity = 65/107 (60.75%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
MP+LTFIARV DG++LVASM+++ D D +D Y+ Q KQI+K+LN RS KCSIES PY FHY+IE+G CYLT +D+ YPKRLAFLYLE++H F+++L+R++G+ W
Sbjct: 1 MPILTFIARVSDGMILVASMESAGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNW 107
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A7S3H6Z0_9STRA (Vesicle-trafficking protein SEC22b n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6Z0_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.130e-38 Identity = 71/105 (67.62%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 16 FIARVMDGLLLVASMD--ASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEWL 324
+IARV+DGL+LVASMD + N +DVY+SQAKQ+LK+LNPRS AK SIES PY+FHY+IE+GICYLTLTD++YPKRLAFL+LE++ F DLK EYG+EWL
Sbjct: 21 YIARVIDGLILVASMDHGTGAGNNQQMDVYKSQAKQLLKKLNPRSTAKMSIESNPYIFHYLIEKGICYLTLTDKSYPKRLAFLFLEEISREFESDLKSEYGDEWL 125
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: A0A3F2RPY3_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RPY3_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.360e-36 Identity = 64/107 (59.81%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
MP++TF+ARV DG+LLVASM++ D +D Y+ QAKQI+KRL+ RS KCSIES Y FHY++++G+CYLTL DR +PKRLAFLYLE+VH F+E+L+R+ G+ W
Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLMQEGVCYLTLADRGFPKRLAFLYLEEVHTGFVEELERDSGSNW 107
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: W2JJM8_PHYPR (Longin domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2JJM8_PHYPR) HSP 1 Score: 146 bits (368), Expect = 3.020e-36 Identity = 65/107 (60.75%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
MP++TF+ARV DG+LLVASM++ D +D Y+ QAKQI+KRL+ RS KCSIES Y FHY+I++G+CYLTL DR +PKRLAFLYLE+VH F+E+L+R+ G+ W
Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNW 107
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Match: K3X2R4_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X2R4_GLOUD) HSP 1 Score: 142 bits (357), Expect = 3.150e-35 Identity = 61/107 (57.01%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 MPVLTFIARVMDGLLLVASMDASSDNQDAVDVYRSQAKQILKRLNPRSVAKCSIESRPYMFHYMIEQGICYLTLTDRAYPKRLAFLYLEDVHEAFIEDLKREYGNEW 321
M ++TF+ARV DG+LLVASM++ D +D Y+ Q KQI+K+L+ RS KCSIES Y FHY+I++G+CYLTL+DR++PKRLAFLYLE++H F+E+L+R++G W
Sbjct: 1 MAIITFVARVSDGMLLVASMESIGDANGNLDTYKQQGKQIMKKLDQRSPTKCSIESGSYTFHYLIQEGVCYLTLSDRSFPKRLAFLYLEEIHAGFVEELERDHGTNW 107 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig173.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig173.2.2 >prot_P-wetherbeei_contig173.2.2 ID=prot_P-wetherbeei_contig173.2.2|Name=mRNA_P-wetherbeei_contig173.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp MAFYDGDWLHGCCGNGDDAAPFDNGGGVHAVVLPVWRLLAVSMMAASNDGback to top mRNA from alignment at P-wetherbeei_contig173:557..2903- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig173.2.2 ID=mRNA_P-wetherbeei_contig173.2.2|Name=mRNA_P-wetherbeei_contig173.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2347bp|location=Sequence derived from alignment at P-wetherbeei_contig173:557..2903- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig173:557..2903- >mRNA_P-wetherbeei_contig173.2.2 ID=mRNA_P-wetherbeei_contig173.2.2|Name=mRNA_P-wetherbeei_contig173.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig173:557..2903- (Phaeothamnion wetherbeei SAG_119_79)back to top |