mRNA_P-wetherbeei_contig1729.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A7S1U2L0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2L0_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.400e-43 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFAPP 216
GVYTLMGPEL+ DGWVKDP+R DW GGVFVTPPGWWHSHHNE+D+PAWVLP+QDAGLYTHQRTLDIRF+PP
Sbjct: 296 GVYTLMGPELNEDGWVKDPIRCDWTPGGVFVTPPGWWHSHHNESDKPAWVLPIQDAGLYTHQRTLDIRFSPP 367
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A7R9UEK6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEK6_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.180e-42 Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 1
Query: 4 VYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFAPP 216
VYTLMG ELD DGWVK+P+R DW TGGVFVTPPGWWHSHHN++DEPAWVLPMQDAGLYTHQRTLDIRF+PP
Sbjct: 305 VYTLMGKELDEDGWVKNPIRCDWTTGGVFVTPPGWWHSHHNDSDEPAWVLPMQDAGLYTHQRTLDIRFSPP 375
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A4D9CRY0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRY0_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.380e-39 Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFA 210
GVYTLMGPEL DGWVKDP+RLDW TGG FVTPPGWWHSHHN+++E AWVLPMQDAGLYTH R+LDIRF+
Sbjct: 289 GVYTLMGPELGEDGWVKDPIRLDWATGGSFVTPPGWWHSHHNDSEEDAWVLPMQDAGLYTHMRSLDIRFS 358
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A9S827_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9S827_PHYPA) HSP 1 Score: 140 bits (353), Expect = 5.500e-39 Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFA 210
G YTLMG ELD++GWVKDP+R+DW TG VF+TPPGWWHSHHNE+ E AWVLP+QDAGLYTHQRTLDIRFA
Sbjct: 265 GTYTLMGKELDSEGWVKDPIRVDWTTGAVFITPPGWWHSHHNESCEEAWVLPIQDAGLYTHQRTLDIRFA 334
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A6U7Z3M6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U7Z3M6_9EUGL) HSP 1 Score: 137 bits (345), Expect = 6.090e-38 Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 4 VYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFAP 213
VYTLMGPEL DGWVK+P++++W GGVF+TPPGWWHSHHNET EPAWVLP+QDAGL THQ+ LDIRFAP
Sbjct: 264 VYTLMGPELGEDGWVKNPIKMEWAPGGVFITPPGWWHSHHNETGEPAWVLPVQDAGLLTHQQILDIRFAP 333
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: W7TWJ4_9STRA (Cupin, RmlC-type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWJ4_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.410e-37 Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFA 210
G YTLMGPELDADGWVKDP+RL+W +G FVTPPGWWHSHHN+TD+ AWVLP+QDAGL+TH RTL I F+
Sbjct: 254 GTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFS 323
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A4RUX6_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RUX6_OSTLU) HSP 1 Score: 133 bits (334), Expect = 1.100e-36 Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRF 207
GVYTLMG E+D +G++ DP+R DW GGVF+TPPGWWHSHHNE+D+ AWVLPMQDAGLYTHQRTLDIRF
Sbjct: 227 GVYTLMGKEIDRNGFIIDPIRCDWVPGGVFITPPGWWHSHHNESDDVAWVLPMQDAGLYTHQRTLDIRF 295
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A7S0CP83_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CP83_MICPS) HSP 1 Score: 134 bits (337), Expect = 4.180e-36 Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 1
Query: 1 GVYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRF 207
GVYTLMG E+D +G + DP+R DW GGVFVTPPGWWHSHHNE+DE AWVLPMQDAGLYTHQRTLDIRF
Sbjct: 289 GVYTLMGKEIDTNGDIVDPIRCDWTPGGVFVTPPGWWHSHHNESDEVAWVLPMQDAGLYTHQRTLDIRF 357
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A482SXZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXZ7_9ARCH) HSP 1 Score: 131 bits (330), Expect = 5.480e-36 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 4 VYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRFAPP 216
VYTLMGPELD GWVK+P++ W TG VF TPPGWWHSHHN++ E AWVLPMQDAGLYTHQRTLDI+F+ P
Sbjct: 224 VYTLMGPELDEQGWVKNPVKCVWNTGAVFSTPPGWWHSHHNDSTEAAWVLPMQDAGLYTHQRTLDIQFSLP 294
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Match: A0A7S0C7C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7C2_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.540e-36 Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 4 VYTLMGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDAGLYTHQRTLDIRF 207
VYTLMG E+D+ G++ DP+R DW G VFVTPPGWWHSHHNE+D AWVLPMQDAGLYTHQRTLDIRF
Sbjct: 99 VYTLMGKEIDSMGFIVDPIRCDWEEGSVFVTPPGWWHSHHNESDFVAWVLPMQDAGLYTHQRTLDIRF 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1729.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1729.6.1 >prot_P-wetherbeei_contig1729.6.1 ID=prot_P-wetherbeei_contig1729.6.1|Name=mRNA_P-wetherbeei_contig1729.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp MGPELDADGWVKDPMRLDWRTGGVFVTPPGWWHSHHNETDEPAWVLPMQDback to top mRNA from alignment at P-wetherbeei_contig1729:6212..6716- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1729.6.1 ID=mRNA_P-wetherbeei_contig1729.6.1|Name=mRNA_P-wetherbeei_contig1729.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=505bp|location=Sequence derived from alignment at P-wetherbeei_contig1729:6212..6716- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1729:6212..6716- >mRNA_P-wetherbeei_contig1729.6.1 ID=mRNA_P-wetherbeei_contig1729.6.1|Name=mRNA_P-wetherbeei_contig1729.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=201bp|location=Sequence derived from alignment at P-wetherbeei_contig1729:6212..6716- (Phaeothamnion wetherbeei SAG_119_79)back to top |