mRNA_P-wetherbeei_contig1729.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: D7FQB5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB5_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.430e-42 Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 3
Query: 672 WTIPAVCVDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPDSF 1052
W++P V VD +G S+F +++ VA AG + IG LSEL+P TG+ FR TPGDYDFD+H AP RQ +VSLD GVDIEV G RRVFPAGT+M EDTWGKGHRSR+VDGK+R+S+F+ +PD F
Sbjct: 149 WSLPCVSVDAEGNSFFCDRK--VALGAGTTGSGIGALSELIPTTGLKFRETPGDYDFDFHCAPARQLVVSLDEGVDIEVTD---GTRRVFPAGTVMLAEDTWGKGHRSRAVDGKSRKSLFLVLPDDF 270
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A7S4C942_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C942_9EUGL) HSP 1 Score: 123 bits (309), Expect = 4.730e-30 Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 3
Query: 672 WTIPAVCVDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDG 1010
W IP V VD G SY+S + + A GANSIG LSE++ T + R TPGDY FDWH APR+QFIV+LD VD+EV G R+V AG + FVEDTWG GH SR+V+G
Sbjct: 14 WVIPVVAVDEAGKSYWSSMTIPLG--ASGGANSIGALSEVMKVTTMQIRETPGDYKFDWHCAPRKQFIVNLDGAVDVEVSD---GTRKVVSAGEMFFVEDTWGTGHLSRAVNG 121
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A835Z6U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U7_9STRA) HSP 1 Score: 127 bits (318), Expect = 6.660e-30 Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = 3
Query: 822 TPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPDSFL 1055
TPGDYDFD+HVAPRRQFIVSLDAGVDIE GERR FPAGT+MFVEDTWG+GHRSR+V G AR +FI VPD L
Sbjct: 162 TPGDYDFDFHVAPRRQFIVSLDAGVDIETSS---GERRAFPAGTVMFVEDTWGRGHRSRAVGGAARHCVFIGVPDDVL 236
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: UPI00096B5534 (uncharacterized protein LOC109581817 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B5534) HSP 1 Score: 123 bits (309), Expect = 8.090e-30 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 3
Query: 672 WTIPAVCVDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPDSF 1052
+TI + DG S+F ++++ G IG +S+++P+TG+ FR TP Y++ WH APRRQFIV+LDA V + V GE+R+ G + FVEDT GKGH S SVDGK R+S+F+ VPD +
Sbjct: 15 FTITRIYSSQDGESHFGTVKIKM-----KGKGDIGSISDIIPSTGLMFRETPSSYNYSWHTAPRRQFIVNLDASVQVTVSS---GEKRILKEGEVFFVEDTTGKGHFSESVDGKVRRSVFLPVPDDY 133
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A7S1NNL2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NNL2_9EUGL) HSP 1 Score: 120 bits (301), Expect = 4.450e-29 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 3
Query: 705 GGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPD 1046
G SYF+ K + + G NSIG LS +P TG+ R TP DYDFDWHVAPR+QF+V+LDA V+IEV G ++V AG + +EDT G+GHRS+SV+G+ R+S+FI V D
Sbjct: 1 GHSYFTTKSIPLGPSHGP--NSIGSLSAAMPVTGLVVRDTPADYDFDWHVAPRKQFVVNLDAAVEIEVSD---GSKKVLGAGEMFLLEDTEGQGHRSKSVNGQPRRSLFITVAD 109
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A7S4P8W1_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P8W1_9EUKA) HSP 1 Score: 119 bits (297), Expect = 3.830e-28 Identity = 63/127 (49.61%), Postives = 80/127 (62.99%), Query Frame = 3
Query: 678 IPAVCVDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPA-TGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPDSFL 1055
I + + +GGS F + ++SP GA IG LS LLP G+FFR TPGDY+F WH APR+QFI++LDA V +EV G ++V AG + FVED G GH S SV GK R+S+FI V D L
Sbjct: 10 ITTITMTKEGGSQFGTMIIPLSSPEGA----IGTLSPLLPTKNGIFFRETPGDYNFSWHCAPRKQFIINLDAAVQVEVTD---GTKKVLEAGEVFFVEDIEGTGHYSSSVGGKTRRSVFIPVDDDEL 129
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A814EIU2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814EIU2_9BILA) HSP 1 Score: 118 bits (295), Expect = 7.100e-28 Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 3
Query: 696 DPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAVPDSFL 1055
D G S+F E V +P IG +SE + +T +FFR TPGDY+FD H APRRQFI++LDA V + V GE R+ P G+I+FVEDT GKGH S++VD K R SIFIAVPD+ +
Sbjct: 12 DDKGESHFDE----VTAPLND-QGVIGFISEAIGSTNIFFRYTPGDYNFDLHNAPRRQFIINLDASVKVTVSD---GESRILPPGSILFVEDTNGKGHISQAVDSKPRNSIFIAVPDNVI 123
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A2V7EX67_9BACT (Uncharacterized protein n=5 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7EX67_9BACT) HSP 1 Score: 114 bits (285), Expect = 9.620e-27 Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 3
Query: 693 VDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAV 1040
VD +G S+F + + + AG LS LPATG+ FR DYD DWH APRRQ+IV+LDAGV I GE R AG ++ VEDTWGKGHRS+++DGK R IF+ V
Sbjct: 8 VDKNGESHFEDMEVPLTESTRAGR-----LSARLPATGIIFREVSADYDLDWHPAPRRQYIVNLDAGVQITASD---GETRRIGAGEVLLVEDTWGKGHRSKALDGKPRHCIFVPV 115
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A800LVS0_9BACT (Uncharacterized protein n=2 Tax=FCB group TaxID=1783270 RepID=A0A800LVS0_9BACT) HSP 1 Score: 113 bits (282), Expect = 2.530e-26 Identity = 58/113 (51.33%), Postives = 73/113 (64.60%), Query Frame = 3
Query: 696 DPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFI 1034
D +G S+F + + ++ IG LS +L ATGV FR T GDYDFDWH AP R+FIV LD V+I G GE R+F G I+ EDT G+GHRSR+VDGK R+S+FI
Sbjct: 9 DGNGQSHFEDVDIPLSD-----TEDIGRLSSVLQATGVIFRKTEGDYDFDWHPAPSRRFIVMLDGSVEITAGD---GETRIFNTGDIVLAEDTQGRGHRSRAVDGKPRKSLFI 113
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Match: A0A3M1XK72_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3M1XK72_9CHLR) HSP 1 Score: 112 bits (281), Expect = 3.480e-26 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 3
Query: 678 IPAVCVDPDGGSYFSEKRLEVASPAGAGANSIGVLSELLPATGVFFRMTPGDYDFDWHVAPRRQFIVSLDAGVDIEVGGRDGGERRVFPAGTIMFVEDTWGKGHRSRSVDGKARQSIFIAV 1040
I + PDG S+F + +E S + IG LS P T + FR T DYD+DWHVAPRRQ+IV LD +++EVG G +R F G ++ VEDT G+GHR+R + GK R+S+FIA+
Sbjct: 3 ITRIYTGPDGESHFEDLEIEYVS-----SGPIGKLSNWQPVTRLAFRETAADYDYDWHVAPRRQYIVMLDGHIEVEVGD---GTKREFRGGDVLLVEDTTGRGHRTRELSGKPRRSLFIAL 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1729.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1729.1.1 >prot_P-wetherbeei_contig1729.1.1 ID=prot_P-wetherbeei_contig1729.1.1|Name=mRNA_P-wetherbeei_contig1729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=348bp MSQGSMNRLPSQWSSHELMEWLKAQGALREEAIAALELVSLDGSGFLTLTback to top mRNA from alignment at P-wetherbeei_contig1729:2..2233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1729.1.1 ID=mRNA_P-wetherbeei_contig1729.1.1|Name=mRNA_P-wetherbeei_contig1729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2232bp|location=Sequence derived from alignment at P-wetherbeei_contig1729:2..2233+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1729:2..2233+ >mRNA_P-wetherbeei_contig1729.1.1 ID=mRNA_P-wetherbeei_contig1729.1.1|Name=mRNA_P-wetherbeei_contig1729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1044bp|location=Sequence derived from alignment at P-wetherbeei_contig1729:2..2233+ (Phaeothamnion wetherbeei SAG_119_79)back to top |