mRNA_P-wetherbeei_contig17264.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17264.1.1
Unique NamemRNA_P-wetherbeei_contig17264.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A3D5DB93_9GAMM (Transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DB93_9GAMM)

HSP 1 Score: 637 bits (1642), Expect = 3.970e-226
Identity = 322/454 (70.93%), Postives = 374/454 (82.38%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRIKD 1362
            M++ HILVVDDEPDIR LLKEILEDEGF++ +AENA  AR+ARR RRPDLILLDIWMPDTDGI+LLKEWSD   VD PVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAK+++TVQRALE A L  ENIGLR       EPIG+S  + +LR +A RIA HKT++FI GESG GKE IAR++H Q  RA+  FI   VAGLARENPDAELFG E +G ++FGSLE ANGG+LFLKDIADMD++TQARLLSALEN++ LRVGGREPV +DVRIIA+TRR+L E VA+G FR+DL+Y LNV+PL VP LR+R  DID L  H+L YFE  EGL RR  +S+ +HRL+DY WPGNVRELKN IQRL+ILG   +V   E+NA LG+ P+   +   PGFDLPLREARE+FEKAYLEYQL A +GSVS+VSERVGIERTHLYRKLRSLGI+PK++KD
Sbjct:    1 MSSPHILVVDDEPDIRNLLKEILEDEGFELNVAENASEARDARRHRRPDLILLDIWMPDTDGISLLKEWSDEGQVDIPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKLILTVQRALETAGLQRENIGLRKGISPLDEPIGNSVPIRRLRENAGRIAQHKTAIFITGESGSGKEVIARYVHKQSPRATGPFITAGVAGLARENPDAELFGTEHDGHITFGSLEQANGGSLFLKDIADMDLNTQARLLSALENEALLRVGGREPVQIDVRIIAATRRDLGEEVASGTFRDDLFYHLNVVPLHVPALRDRAEDIDILTAHYLGYFEGNEGLRRREFSSSAKHRLRDYGWPGNVRELKNLIQRLMILGSGEEVSTREINASLGIRPQVDGDLPYPGFDLPLREAREKFEKAYLEYQLHALHGSVSKVSERVGIERTHLYRKLRSLGIEPKQVKD 454          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A523NPE5_9PROT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NPE5_9PROT)

HSP 1 Score: 634 bits (1636), Expect = 3.620e-225
Identity = 319/456 (69.96%), Postives = 373/456 (81.80%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRIKDEG 1368
            M++ HILVVDDEPDIR LLKEILEDEGF++T+AENA  AR+ARRQRRPDL+LLDIWMPDTDGITLLKEWSDG  VD PV+MMSGHGTVETAVEATRLGA+DFIEKPLSIAK+LVTVQRALE A L  EN+GL+       +PIG  A + KLR DA RIA  +T+VFI GESG GKE IAR++H Q  RA   FI V VAGLARENPDAELFG E NG++ FG LE ANGG+LFLKDIADMD++TQARLLSALE+++ LRVGG +PV +DVRIIA+TRR+L   VAA  FR+DL+Y LNV+PL VPPLR+R  DID L+ ++L YF T EGLP+R  +S  + RL++YDW GNVRELKN +QRL+ILG T +V V E+N+ LG+ P+   EP  PGFDLPLREARE+FEKAYLEYQL    GSVS+V+ERVGIERTHLYRKLRSLGIDPK+IK+  
Sbjct:    1 MSSPHILVVDDEPDIRSLLKEILEDEGFEITVAENASHARQARRQRRPDLVLLDIWMPDTDGITLLKEWSDGGQVDVPVVMMSGHGTVETAVEATRLGAFDFIEKPLSIAKLLVTVQRALETADLQRENVGLKKGITPLDDPIGIGAAIRKLRTDAGRIAQSQTAVFITGESGSGKEVIARYLHKQSPRADGPFITVGVAGLARENPDAELFGTEHNGQVIFGYLEQANGGSLFLKDIADMDLNTQARLLSALESEALLRVGGLDPVQIDVRIIAATRRDLIAAVAAHTFRDDLFYHLNVVPLQVPPLRDRGEDIDLLLSYYLDYFATNEGLPQREFSSGAKSRLREYDWAGNVRELKNLVQRLMILGSTEKVSVREINSALGIRPQTEGEPPFPGFDLPLREAREKFEKAYLEYQLHELRGSVSKVAERVGIERTHLYRKLRSLGIDPKQIKESS 456          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A1S9CXX6_9GAMM (Nitrogen regulation protein NR(I) n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9CXX6_9GAMM)

HSP 1 Score: 578 bits (1489), Expect = 7.450e-203
Identity = 295/455 (64.84%), Postives = 355/455 (78.02%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRIKDE 1365
            M+  H+LVVDDEPDIR LL EILEDEG++V++A+NAERARE+RR RRPDL+LLDIWMPD DGITLLKEWS+G  +D PVIMMSGHG+VETAVEATRLGAYDFIEKPLS+AK+L+T++RALE A+L  ENI LR  SQ+  EP+G S E  +LR   +RIA H T+VF+ GE G GKE  AR++H    RA   F++V+VAGLA ENP AELFG E+ G + FGSLE ANGGTLFLKDIAD+++  QARLLSALE+Q FLRVGGR+PV++DVRI+A+TR +L E V AG+FR+DLYY LNV+PL +PPLRE   DI EL+  +   F  +EGLPRR      + +L+ Y WPGNVRELKN +QRLLILG    VE  EV A LG+    S    LPGFD PLREAREQFEKAY EYQL+   GS+SR++ RVG+ERTHLYRKLR+LGIDPK+   E
Sbjct:    1 MSAPHLLVVDDEPDIRALLGEILEDEGYEVSLADNAERARESRRARRPDLVLLDIWMPDCDGITLLKEWSEGVPLDIPVIMMSGHGSVETAVEATRLGAYDFIEKPLSMAKLLLTIKRALEAAALTRENIKLR--SQATREPVGDSPEFIRLRDQVKRIASHHTAVFMRGEPGTGKEVFARYLHDHSPRAQAPFVSVAVAGLAVENPAAELFGSEEEGNVHFGSLEKANGGTLFLKDIADLELGLQARLLSALEHQKFLRVGGRDPVTIDVRIVAATRYDLMEYVRAGRFRDDLYYHLNVVPLQLPPLREHAEDIPELLAFYCELFAAQEGLPRRRFTLPAQKQLRSYGWPGNVRELKNLVQRLLILGSGETVEGFEVEAALGIRTAESLTEPLPGFDRPLREAREQFEKAYFEYQLQRAGGSISRIAGRVGLERTHLYRKLRALGIDPKQTPGE 453          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A3M0YJ23_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YJ23_9GAMM)

HSP 1 Score: 553 bits (1424), Expect = 6.640e-193
Identity = 286/458 (62.45%), Postives = 354/458 (77.29%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGST-VDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLL-PEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRIKDEG 1368
            M+  HILVVDDEPDIR LLK+ILEDE ++V++A NAE AR+ARR+RRPDL+LLDIWMPDTDGITLLKEWS+    + TPV+M+SGHG VETAVEATRLGAYDF+EKPLS+AK+LVTV+ ALE A L  ENI LR ++Q   EPIG S  M++LR   RRIA H T V I+GESG GKE  AR++H+  +RA   F+ V VA +A E+   ELFG E+  ++ FG LE ANGGTLFL ++ADMD +TQARLLSAL+++SF RVGGREPV ++ R+IA+T RNL E V AG+FREDLYY LNV+PL VP LRE   DI EL+D+++  F T+EGLP R+  +A ++RL++Y WPGNVRELKN +QRLLILG   ++ + EV+A LG L P     P+   FDLPLR AREQFE+AYLE+QLR   GSV +V++R GIERTHLYRKL++LGID KRI  E 
Sbjct:    1 MSHEHILVVDDEPDIRNLLKDILEDEDYEVSLAANAEEARQARRKRRPDLVLLDIWMPDTDGITLLKEWSESQEGLATPVVMISGHGNVETAVEATRLGAYDFLEKPLSMAKLLVTVKNALEAARLQQENIQLRHQAQPVTEPIGKSLAMQRLREQVRRIAQHDTWVLISGESGSGKEVFARYLHAHSARAGGPFVVVGVASIAGEHSARELFGAEEGDEVYFGRLEQANGGTLFLDEVADMDAATQARLLSALQSRSFQRVGGREPVPLNARVIAATHRNLEEEVRAGRFREDLYYHLNVVPLRVPSLREHSEDIPELLDYYVNLFATQEGLPYRSFTTAAQNRLRNYPWPGNVRELKNMVQRLLILGAGKEIGLEEVDAALGTLRPAMPLPPVAENFDLPLRAAREQFERAYLEHQLRQTGGSVGKVAKRSGIERTHLYRKLKALGIDAKRIHAEA 458          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A450XDB6_9GAMM (Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XDB6_9GAMM)

HSP 1 Score: 545 bits (1404), Expect = 5.850e-190
Identity = 279/453 (61.59%), Postives = 344/453 (75.94%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLG-LLPEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRI 1356
            M  AHILVVDDEPDIR LLK+ILEDE ++V++AEN E AR+ARR RRPDL+LLDIWMPDTDGITLLKEWS+ + +DTPVIMMSGHGTVETAVEATRLGAYD++EKPLS+AK+ ++V+RALE A L  EN+ LR  + S  EP+G S  ++ LR   +R+A H T V I GESG GKE  AR++H   SRAS  F+  +VAG+A  NP  E+FG ED  K+ FGSLELANGGTLFL+DIADM+   QARLL AL +QSF RV G  PV ++VRI+A+T R+L   V AGKFREDLYY LNV+P+ +PPLRE R D+ EL+  ++    TR+ LP R  + A ++RL++YDWPGN+RELKN  QRLLILG   ++   EV A LG   P   A+  L  FDLPL+EAREQFE+AY EYQLR   GS+S+V+ + G+ER+HLYRKLRSLGID KR+
Sbjct:    1 MAAAHILVVDDEPDIRHLLKDILEDEDYEVSVAENGEEARQARRARRPDLVLLDIWMPDTDGITLLKEWSENTGLDTPVIMMSGHGTVETAVEATRLGAYDYLEKPLSMAKLFLSVRRALETAKLRQENVELRQEAISVSEPVGKSTSLQALREQIKRVAQHDTPVLITGESGSGKEVAARYLHGLSSRASGPFVRATVAGMAGGNPPVEVFGSEDGDKIHFGSLELANGGTLFLEDIADMESELQARLLGALSHQSFQRVDGLAPVRINVRIVAATSRDLPARVQAGKFREDLYYHLNVVPVHIPPLREHREDVPELLAFYMNLLVTRDNLPYRQFSFASQNRLRNYDWPGNIRELKNVTQRLLILGSGQEIGEEEVEAALGGAQPSREAQGELSEFDLPLKEAREQFERAYFEYQLRKA-GSISKVATQTGMERSHLYRKLRSLGIDTKRV 452          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A523KDA5_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KDA5_9GAMM)

HSP 1 Score: 543 bits (1398), Expect = 5.110e-189
Identity = 274/452 (60.62%), Postives = 343/452 (75.88%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRI 1356
            M+ A+IL+VDDEPDI  L+KEILEDEG++V+ AENAE+A EARR RRPDLILLDIWMPDTDGI+LLKEW+  S+ +TPVIMMSGHGTVETAVEATRLGAYDF+EKPLS AK+L+TV+ ALE A L  ENIGLR  S +  EPIG S  M+ LR   +RIA H TSV + GESG GKE  AR++H   +R    F+ V +AGLA  N  AELFG ED  ++ FGSLE ANGGTLFL+DI DMD+  QARLLSAL +QSF+RV G  PVS++VRIIA+T  + +  V  G  REDLYY LNV+PL +PPLR  R DI EL+++++  F T EGLP R      ++RL++Y WPGN+RELKN + RLLILG    ++  E++  +G + E     + P FDLPL+EAREQFE+ YLE+QLR   GS+S++++RVG+ERTHLYRK+R+LGI+PKR+
Sbjct:    1 MSEAYILIVDDEPDICTLVKEILEDEGYEVSAAENAEQAHEARRARRPDLILLDIWMPDTDGISLLKEWASNSSENTPVIMMSGHGTVETAVEATRLGAYDFLEKPLSTAKLLLTVKNALETAQLKQENIGLRRESGTVTEPIGRSPIMQNLREQVKRIAQHDTSVLLLGESGSGKEVHARYLHHSSNRRDGPFVRVPIAGLANANSAAELFGAEDGEQVHFGSLEQANGGTLFLEDIIDMDLGVQARLLSALTHQSFMRVDGVAPVSINVRIIAATSHDPSRAVEEGTLREDLYYHLNVVPLEIPPLRSHRDDIPELLNYYIDQFATTEGLPYRRFTVGAQNRLRNYSWPGNIRELKNIVHRLLILGSGANIDQEEIDLSIGEIREKEESGIPPEFDLPLKEAREQFERRYLEHQLRETGGSMSKMAKRVGMERTHLYRKIRALGIEPKRV 452          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A450UT33_9GAMM (DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains n=2 Tax=Candidatus Kentron sp. LFY TaxID=2126342 RepID=A0A450UT33_9GAMM)

HSP 1 Score: 536 bits (1381), Expect = 1.880e-186
Identity = 276/453 (60.93%), Postives = 343/453 (75.72%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLP-EASAEPLLPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRI 1356
            MT AHILVVDDEPDIR LLKEILEDE ++V++AEN E AR+ARR RRPDLILLDIWMPDTDGITLLKEWS+ S +DTPVIMMSGHGTVETAVEATRLGAYD+IEKPLS+AK+ ++V+RALE + L  EN+ LR  +    EP+G S  M+ LR   +R+A H T V + GESG GKE +AR++H   +RAS  F+  +VAG+  +NP  E+FG ED  K+ FGSLELANGGTLFL+DIADM+   QARLL AL +QSF RV G  PV ++VRIIA+T  +L   V AG+FREDLYY LNV+P+ VPPLR+ R D+ EL+  ++    TR+ LP R  + A ++RL++YDWPGN+RELKN  QRLLIL    +++  EV A LG  P    +      FDLPL+EAREQFE+AYLE+Q+R  NGS+S+V+ + GIERTHLYRKLR+L ID KR+
Sbjct:    1 MTAAHILVVDDEPDIRQLLKEILEDEDYEVSVAENGEGARQARRTRRPDLILLDIWMPDTDGITLLKEWSE-SRLDTPVIMMSGHGTVETAVEATRLGAYDYIEKPLSMAKLFLSVRRALEASKLRQENVELRQEAIPVGEPVGRSPLMQALRDQVKRVAQHDTPVLVTGESGSGKEVVARYLHGLSNRASGPFVRATVAGMTGDNPPVEIFGSEDGDKVHFGSLELANGGTLFLEDIADMEPELQARLLGALRHQSFQRVDGVAPVHINVRIIAATSNDLPTEVQAGRFREDLYYHLNVVPVHVPPLRDHREDVPELLTFYMNLLVTRDNLPYRNFSFASQNRLRNYDWPGNIRELKNVTQRLLILSTGREIDEGEVEAALGSAPAHVESSGKFSEFDLPLKEAREQFERAYLEHQIRKANGSISKVASQTGIERTHLYRKLRALKIDAKRV 452          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A450T8H8_9GAMM (Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Candidatus Kentron sp. DK TaxID=2126562 RepID=A0A450T8H8_9GAMM)

HSP 1 Score: 536 bits (1380), Expect = 2.960e-186
Identity = 273/455 (60.00%), Postives = 343/455 (75.38%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLP---GFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRI 1356
            MT AHIL+VDDEPDIR LLKEILEDEG++V++AEN E AR+ARR RRPDL LLDIWMPDTDGITLLKEWS+G+ +DTPVIMMSGHGTVETAVEATRLGAYD+IEKPLS+AK+ + V+RALE A L  EN+ LR       EP+G S+ M+ LR   +R+A H T V I GESG GKE +AR++H   +RAS  F+  +VAG+  + P  E+FG ED   + FGSLELAN GTLFL+D+ADM    QARLL AL +QSF RV G  PV ++VRIIA+T R+LA  V AG+FREDLYY LNV+P+ VPPLRE   DI EL + ++ +F  R+ LP R+L+ + ++RL+++DWPGN+RELKN  QRLLI G   +++  EV A LG        PL+    GFDLPL+EARE+FE+AY E+ +R  +GS+S+V+ R GIERTHLYRKLR+L ID K++
Sbjct:    1 MTAAHILIVDDEPDIRNLLKEILEDEGYEVSVAENGEGARQARRARRPDLTLLDIWMPDTDGITLLKEWSEGNLLDTPVIMMSGHGTVETAVEATRLGAYDYIEKPLSMAKLFLAVRRALETAQLKQENVELRQEVVPITEPVGRSSSMQALRDRIKRVAQHDTPVLITGESGSGKEIVARYLHKLSNRASGPFVRATVAGMTGDTPPVEIFGSEDGDTVHFGSLELANSGTLFLEDVADMGRELQARLLGALLHQSFQRVDGLTPVCINVRIIAATSRDLATEVQAGRFREDLYYHLNVVPVHVPPLREHCEDIQELFEFYMNFFVVRDNLPYRSLSFSAQNRLRNHDWPGNIRELKNVTQRLLIFGSGQEIDGDEVAATLGGSAPRLTFPLVAEPQGFDLPLKEAREKFERAYFEHHIRKASGSISKVANRAGIERTHLYRKLRALKIDAKQV 455          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A1H3GB91_ALLWA (DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains n=4 Tax=Chromatiaceae TaxID=1046 RepID=A0A1H3GB91_ALLWA)

HSP 1 Score: 535 bits (1379), Expect = 3.650e-186
Identity = 270/452 (59.73%), Postives = 342/452 (75.66%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPL--LPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPK 1350
            M+  HILVVDDEPDIRGL+KEILEDEG+ V +AEN E AR A R RRPDLILLDIWMPD DGI+LLKEWSD + +  PVIMMSGHGTVETAVEATRLGAYDF+EKPLS+AK+L+T++RALE   L  ENIGL+ R+   HEP+G SA M++LR   +RIA H T V I GE+G G+ET AR++H+Q +R    F+++SV+ LA      ELFGIE+     +GSLE A GGTL L ++ADM+   Q++LL AL++ SFLRVGG EPV +DVRI+A T+RNL E V AG+FREDL+Y LNV+PL +PPLR+   D+ +L++ +L YF T E LP R  +   ++ L++YDWPGNVRELKN +QR+LILG   ++ + EV + LG LP   A+ L  L  FD PLR+AREQFEKAYL+YQL    G+VS++++  G+ERTHLYRKLRSLGI+ K
Sbjct:    1 MSATHILVVDDEPDIRGLVKEILEDEGYAVAVAENGEAARHALRDRRPDLILLDIWMPDLDGISLLKEWSDDAGLPCPVIMMSGHGTVETAVEATRLGAYDFLEKPLSMAKLLLTIERALEAEKLQQENIGLKRRAPQVHEPVGRSAAMQRLREQVKRIAQHDTWVLITGEAGSGRETFARYLHAQSARRERPFVDLSVSALAGNQAAVELFGIEEGEHTHYGSLEKAAGGTLLLDEVADMEWDAQSKLLGALDSGSFLRVGGGEPVRIDVRIVAVTQRNLEEEVRAGRFREDLFYHLNVVPLHLPPLRDHAEDVPDLLNFYLDYFATHEKLPYRRFSVGAQNFLRNYDWPGNVRELKNLVQRVLILGSGDEISLKEVESALGALPMMHAQSLEGLVSFDQPLRQAREQFEKAYLDYQLEKHQGNVSKMAKEAGMERTHLYRKLRSLGIEIK 452          
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Match: A0A4R2L4R5_9GAMM (DNA-binding NtrC family response regulator n=1 Tax=Plasticicumulans lactativorans TaxID=1133106 RepID=A0A4R2L4R5_9GAMM)

HSP 1 Score: 535 bits (1379), Expect = 4.060e-186
Identity = 276/458 (60.26%), Postives = 349/458 (76.20%), Query Frame = 1
Query:    1 MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDLILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAYDFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEMEKLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVAGLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLLSALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNVLPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDWPGNVRELKNFIQRLLILGGTGQVEVSEVNAMLG-LLPEASAEPL--LPGFDLPLREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPKRIKDE 1365
            M+TAHILVVDDEPDIR L+KEILEDEG++V+IAEN   AREARR RRPDLILLDIWMPD DGI+LLKEW++   +  PVIMMSGHGTVETAVEATRLGA+DFIEKPLS+AK+L+TV+RALE   L  EN GLR  ++   EP+G S  +++LRA A RIA H   V I GE G GKE  AR+IH+Q  R +  F++V V  +AREN   ELFG ED  ++ +G LE A+GGTLFL ++ADM + TQA+L  ALEN SFLRVGG+EPV V+VRIIA+T R+L   +AAG+FREDLYY LNVLP+ +PPLRE   D+ EL+ +++ YF  +E LP R    A R+RL++Y WPGN+RELKN +QRLLILGG  ++ + EV + +    P    EP+  +P  DLPLREAREQFE+AYL  Q +  +G+V+R++E+VG+ERT+LYRKLR+LGIDPKR  ++
Sbjct:    1 MSTAHILVVDDEPDIRDLVKEILEDEGYEVSIAENGASAREARRARRPDLILLDIWMPDIDGISLLKEWAEADGLPCPVIMMSGHGTVETAVEATRLGAWDFIEKPLSMAKLLLTVERALEADKLARENQGLRRHARPVTEPVGRSEVIQRLRAQAGRIASHDAPVLIAGEPGTGKEIYARYIHAQSPRRAGPFVDVGVGSIARENSALELFGSEDGDRVHYGRLEQASGGTLFLDELADMALETQAKLAGALENGSFLRVGGKEPVQVNVRIIAATHRDLEAEIAAGRFREDLYYHLNVLPIRLPPLREHPEDVPELLTYYVNYFVDQENLPYRNFTMAARNRLRNYGWPGNIRELKNLVQRLLILGGGEEIALEEVESAISHSAPARPREPVGAIP-LDLPLREAREQFERAYLTQQFKECDGNVARLAEKVGMERTNLYRKLRALGIDPKRTPED 457          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17264.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DB93_9GAMM3.970e-22670.93Transcriptional regulator n=1 Tax=Gammaproteobacte... [more]
A0A523NPE5_9PROT3.620e-22569.96Sigma-54-dependent Fis family transcriptional regu... [more]
A0A1S9CXX6_9GAMM7.450e-20364.84Nitrogen regulation protein NR(I) n=1 Tax=Chromati... [more]
A0A3M0YJ23_9GAMM6.640e-19362.45Sigma-54-dependent Fis family transcriptional regu... [more]
A0A450XDB6_9GAMM5.850e-19061.59Two component, sigma54 specific, transcriptional r... [more]
A0A523KDA5_9GAMM5.110e-18960.62Sigma-54-dependent Fis family transcriptional regu... [more]
A0A450UT33_9GAMM1.880e-18660.93DNA-binding transcriptional response regulator, Nt... [more]
A0A450T8H8_9GAMM2.960e-18660.00Two component, sigma54 specific, transcriptional r... [more]
A0A1H3GB91_ALLWA3.650e-18659.73DNA-binding transcriptional response regulator, Nt... [more]
A0A4R2L4R5_9GAMM4.060e-18660.26DNA-binding NtrC family response regulator n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17264contigP-wetherbeei_contig17264:51..1427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1249627.D779_1368
PFAMsHTH_8,Response_reg,Sigma54_activat
Model size1377
Max annot lvl135613|Chromatiales
KEGG koko:K13599
KEGG Pathwayko02020,map02020
KEGG ModuleM00498
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.5e-184
EggNOG OGsCOG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RRXX@1236|Gammaproteobacteria,1WXC2@135613|Chromatiales
Descriptionresponse regulator receiver
Cds size1377
COG categoryT
BRITEko00000,ko00001,ko00002,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186112.2819366-CDS-P-wetherbeei_contig17264:50..14271683186112.2819366-CDS-P-wetherbeei_contig17264:50..1427Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17264 51..1427 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17264.1.1prot_P-wetherbeei_contig17264.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17264 51..1427 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17264.1.1

>prot_P-wetherbeei_contig17264.1.1 ID=prot_P-wetherbeei_contig17264.1.1|Name=mRNA_P-wetherbeei_contig17264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=459bp
MTTAHILVVDDEPDIRGLLKEILEDEGFDVTIAENAERAREARRQRRPDL
ILLDIWMPDTDGITLLKEWSDGSTVDTPVIMMSGHGTVETAVEATRLGAY
DFIEKPLSIAKILVTVQRALENASLVSENIGLRARSQSPHEPIGSSAEME
KLRADARRIADHKTSVFINGESGVGKETIARFIHSQGSRASNRFINVSVA
GLARENPDAELFGIEDNGKLSFGSLELANGGTLFLKDIADMDMSTQARLL
SALENQSFLRVGGREPVSVDVRIIASTRRNLAELVAAGKFREDLYYRLNV
LPLAVPPLRERRGDIDELVDHFLTYFETREGLPRRALASAVRHRLQDYDW
PGNVRELKNFIQRLLILGGTGQVEVSEVNAMLGLLPEASAEPLLPGFDLP
LREAREQFEKAYLEYQLRAFNGSVSRVSERVGIERTHLYRKLRSLGIDPK
RIKDEGRE*
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mRNA from alignment at P-wetherbeei_contig17264:51..1427+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17264.1.1 ID=mRNA_P-wetherbeei_contig17264.1.1|Name=mRNA_P-wetherbeei_contig17264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1377bp|location=Sequence derived from alignment at P-wetherbeei_contig17264:51..1427+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTACCGCCCACATTCTGGTCGTCGACGACGAACCCGACATCCGCGG GCTGCTCAAGGAAATCCTCGAAGATGAGGGTTTTGACGTCACCATCGCCG AAAACGCCGAGCGCGCGCGCGAAGCGCGCCGCCAGCGCCGACCTGATCTG ATCCTGCTCGATATCTGGATGCCCGACACCGACGGCATCACCCTGCTCAA GGAATGGTCTGACGGCAGTACTGTAGATACGCCGGTGATCATGATGTCCG GTCACGGCACGGTCGAGACCGCTGTCGAGGCCACTCGACTCGGTGCTTAC GACTTCATCGAAAAGCCGCTGTCGATCGCCAAGATTCTGGTCACCGTACA GCGTGCGCTGGAGAACGCCAGCCTGGTGTCAGAAAACATCGGCTTAAGGG CGCGCAGCCAGTCGCCGCACGAACCGATAGGCTCCAGCGCGGAAATGGAA AAGCTGCGCGCTGATGCGCGGCGTATCGCCGATCACAAAACCAGCGTTTT CATCAACGGTGAATCGGGTGTTGGTAAGGAAACCATCGCGCGCTTCATTC ACAGCCAAGGCAGCCGCGCCAGCAACCGCTTCATCAATGTAAGTGTCGCC GGACTTGCCCGCGAGAATCCGGACGCTGAACTGTTCGGCATCGAGGACAA CGGCAAGCTGAGTTTCGGTTCGCTGGAACTCGCCAATGGTGGCACGCTGT TCCTGAAAGACATCGCCGACATGGACATGAGCACCCAGGCGCGCCTGTTG AGCGCTTTGGAGAATCAGTCCTTCCTGCGCGTCGGCGGGCGCGAACCGGT AAGCGTCGATGTGCGCATCATCGCGAGTACGCGGCGCAATCTCGCCGAGC TGGTGGCGGCCGGCAAGTTTCGCGAAGATCTCTACTACCGACTCAATGTA CTGCCGCTGGCCGTACCACCGCTGCGCGAACGACGCGGCGACATCGATGA GCTGGTTGATCACTTTCTCACCTACTTCGAAACCCGCGAAGGGCTGCCAC GCCGCGCGTTGGCGAGTGCCGTGCGCCATCGCCTGCAAGACTACGACTGG CCTGGCAATGTGCGCGAATTGAAGAATTTCATTCAGCGTCTGCTGATCCT GGGCGGTACCGGCCAGGTGGAAGTGTCAGAGGTCAATGCCATGCTCGGCC TGCTGCCGGAAGCAAGCGCCGAGCCCTTGTTACCCGGTTTTGATCTGCCA CTGCGCGAGGCCCGCGAACAGTTCGAGAAGGCCTATCTCGAATACCAGCT GCGCGCTTTCAATGGCAGCGTGAGCCGCGTCTCGGAGCGGGTGGGCATCG AACGTACCCATCTCTACCGCAAGCTGCGCAGCCTCGGCATCGATCCCAAG CGGATCAAGGACGAAGGTCGCGAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17264:51..1427+

>mRNA_P-wetherbeei_contig17264.1.1 ID=mRNA_P-wetherbeei_contig17264.1.1|Name=mRNA_P-wetherbeei_contig17264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1377bp|location=Sequence derived from alignment at P-wetherbeei_contig17264:51..1427+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTACCGCCCACATTCTGGTCGTCGACGACGAACCCGACATCCGCGG
GCTGCTCAAGGAAATCCTCGAAGATGAGGGTTTTGACGTCACCATCGCCG
AAAACGCCGAGCGCGCGCGCGAAGCGCGCCGCCAGCGCCGACCTGATCTG
ATCCTGCTCGATATCTGGATGCCCGACACCGACGGCATCACCCTGCTCAA
GGAATGGTCTGACGGCAGTACTGTAGATACGCCGGTGATCATGATGTCCG
GTCACGGCACGGTCGAGACCGCTGTCGAGGCCACTCGACTCGGTGCTTAC
GACTTCATCGAAAAGCCGCTGTCGATCGCCAAGATTCTGGTCACCGTACA
GCGTGCGCTGGAGAACGCCAGCCTGGTGTCAGAAAACATCGGCTTAAGGG
CGCGCAGCCAGTCGCCGCACGAACCGATAGGCTCCAGCGCGGAAATGGAA
AAGCTGCGCGCTGATGCGCGGCGTATCGCCGATCACAAAACCAGCGTTTT
CATCAACGGTGAATCGGGTGTTGGTAAGGAAACCATCGCGCGCTTCATTC
ACAGCCAAGGCAGCCGCGCCAGCAACCGCTTCATCAATGTAAGTGTCGCC
GGACTTGCCCGCGAGAATCCGGACGCTGAACTGTTCGGCATCGAGGACAA
CGGCAAGCTGAGTTTCGGTTCGCTGGAACTCGCCAATGGTGGCACGCTGT
TCCTGAAAGACATCGCCGACATGGACATGAGCACCCAGGCGCGCCTGTTG
AGCGCTTTGGAGAATCAGTCCTTCCTGCGCGTCGGCGGGCGCGAACCGGT
AAGCGTCGATGTGCGCATCATCGCGAGTACGCGGCGCAATCTCGCCGAGC
TGGTGGCGGCCGGCAAGTTTCGCGAAGATCTCTACTACCGACTCAATGTA
CTGCCGCTGGCCGTACCACCGCTGCGCGAACGACGCGGCGACATCGATGA
GCTGGTTGATCACTTTCTCACCTACTTCGAAACCCGCGAAGGGCTGCCAC
GCCGCGCGTTGGCGAGTGCCGTGCGCCATCGCCTGCAAGACTACGACTGG
CCTGGCAATGTGCGCGAATTGAAGAATTTCATTCAGCGTCTGCTGATCCT
GGGCGGTACCGGCCAGGTGGAAGTGTCAGAGGTCAATGCCATGCTCGGCC
TGCTGCCGGAAGCAAGCGCCGAGCCCTTGTTACCCGGTTTTGATCTGCCA
CTGCGCGAGGCCCGCGAACAGTTCGAGAAGGCCTATCTCGAATACCAGCT
GCGCGCTTTCAATGGCAGCGTGAGCCGCGTCTCGGAGCGGGTGGGCATCG
AACGTACCCATCTCTACCGCAAGCTGCGCAGCCTCGGCATCGATCCCAAG
CGGATCAAGGACGAAGGTCGCGAATAG
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