mRNA_P-wetherbeei_contig1725.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: D8LFU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU7_ECTSI) HSP 1 Score: 116 bits (291), Expect = 9.320e-27 Identity = 73/149 (48.99%), Postives = 96/149 (64.43%), Query Frame = 3
Query: 180 LQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVMRTA 626
+QSFT FT+ FA+E+ +LL +FR +FFR GY DL V+++CL+ E +G + RL L ALR WRV R+ + L + DAH T L R + RL+E+ RRE E+RKRV+ MLRGYKDEV+TLNEALKIAA + A
Sbjct: 58 MQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLFVVSLCLYQEISGKGKGVRL-LGALRVWRVARVMNTLLLSADDAHNLTRDTL---RLAEKDLDIDRRRLQETLRREAEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAA 202
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A7S2BNW9_9STRA (Voltage-gated hydrogen channel 1 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNW9_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.010e-26 Identity = 84/197 (42.64%), Postives = 113/197 (57.36%), Query Frame = 3
Query: 36 FVESTEVQLVVAVLVLADIAANNALLLLPSKDDSKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVMRTA 626
F ES EVQLV +L+ D+A LLL + + +A A ++++FT FT+F+F LEL L+ +FR FF G DL ++A CL E G R RL L LR WRV+RL + L + + T + + E ARLE++ RREL+S+KRVE MLR YKDEV+TLNEALKIAA + + A
Sbjct: 84 FFESFEVQLVTLILIALDVALAVTSLLLTCGNAPASSGLAL--AVLRVIETFTGFTVFYFLLELGALMFAFRSAFFGHIGNILDLAIVATCLVWEVDGRSRAIRL-LGVLRFWRVMRLVNTLLTTKETKLQETKDAWDTDLQILEETRVEIARLEDNLRRELDSKKRVETMLRSYKDEVETLNEALKIAALDIAQAA 277
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A7S2W125_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W125_9STRA) HSP 1 Score: 111 bits (278), Expect = 8.740e-25 Identity = 78/204 (38.24%), Postives = 117/204 (57.35%), Query Frame = 3
Query: 15 KAATMGQFVESTEVQLVVAVLVLADIAANNALLLLPSKDDSKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVMRTA 626
+A G F ES ++Q++ + D+AA AL+ L ++ + A A N++QS FT+F+F LELA L +F+ RF G D+ V+A + AE G R R+ L LR WR++RL + +A + + + A++ R E+ +RLE+S RRE +++KRVE ML+ YKDEV+TLNEALKIAA + A
Sbjct: 47 RAQEAGNFFESFDIQVLTLCFIFVDVAAATALVALSGEESLASSTTA---AVLNVIQSLMGFTIFYFILELAALAWAFKTRFLTHAGILVDMGVVACAVLAEVQGTSRIVRV-LGVLRVWRLMRLINTVMATKDKEIDSIREEWQADQARLEESQITISRLEDSIRREGDAKKRVEDMLKSYKDEVETLNEALKIAALDIAAAA 246
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: H3HBC9_PHYRM (PCI domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBC9_PHYRM) HSP 1 Score: 112 bits (279), Expect = 6.800e-24 Identity = 79/194 (40.72%), Postives = 110/194 (56.70%), Query Frame = 3
Query: 24 TMGQFVESTEVQLVVAVLVLADIAANNALLLLPSKDDSKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAA 605
++G +E+TE Q+V+ +L++ D+ + S++A + A L++SFT FTL F +ELAVLL +FRR+FF GY DL V+++ L E + RL L LR WRVLRL + E AH ATC L E + ES +RE ESR+ +E +LRGYKDE+ TL EAL+IAA
Sbjct: 281 SLGAILETTEAQMVMILLIVLDVGNGK-------EGSSEVAVPLLVRVATQLVESFTGFTLVLFLIELAVLLAAFRRKFFAHAGYVLDLTVVSISLTLELYTQAKAVRL-LGVLRVWRVLRLVRRLVDQERAAHDATCLLLEQEELKLLHVRMQKDAAHESLKREYESREGLEQLLRGYKDEIATLKEALQIAA 466
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A7S2A8Z7_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z7_TRICV) HSP 1 Score: 99.8 bits (247), Expect = 8.490e-21 Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 3
Query: 24 TMGQFVESTEVQLVVAVLVLADIAANNALLLLPSK----DDSKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAE-AAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVMRTAV 629
++G+ +E EVQL+ L+ D+ A+ ++L K +D + L++SFT+FTLFFF +E+A L+ +F R F GY D+ +I +CL +E + + RL L LR WR RL L D H AT L ++ + A + LEE E+E RK VE ML+GYK+EV+ L EALKIAA V A+
Sbjct: 6 SLGRLLEQQEVQLITTALIYLDLIASTFRIVLQGKANFTEDENHRPDEGSESIHWLIRSFTSFTLFFFMIEIASLIFAFGTRCFWHLGYVADIIIIMLCLSSELTSSESKAIRL-LGFLRIWRFARLVSTTLDMAQDQHNATKSCLQEAQQHGEKLRAKVSFLEERNMNEIEHRKEVEKMLQGYKEEVEMLGEALKIAAFDVAGAAI 211
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A2P4YCG1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCG1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.570e-20 Identity = 70/160 (43.75%), Postives = 91/160 (56.88%), Query Frame = 3
Query: 135 SKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASV 614
S +AA + A L++SFT FTLF F +EL +LL +FR +FF GY DL V+++ L E + RL L LR WRVLRL L E AH T L E+ + ES +RE ESR+ +E +LRGYKDE+ TL EAL+IAA +V
Sbjct: 41 SDVAASLLVRVATRLVESFTGFTLFLFLIELVILLAAFRHKFFAHAGYVVDLVVVSLSLAVELYAQTKVARL-LGILRVWRVLRLVGKLLDQERAAHDTTRLLLEQEQLKLLHVRMQKDAAHESLKREYESREGIEQLLRGYKDEIVTLKEALQIAAQAV 199
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A835YTE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.710e-20 Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 3
Query: 198 FTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVMRTA 626
FT+FFFALEL VLL +FRR+F GY DL ++A CL E G + RL L R WRV+RL + + + + A +RRA E A RL E+ R E E+RK E ML GYK+E +TL EAL IAA + A
Sbjct: 3 FTIFFFALELLVLLAAFRRKFLLHLGYMLDLAIVAACLWRELQGGSKELRL-LGYCRGWRVVRLVNTLVEQAQERASRAADREAEAQRRAIEVEADRRRLAEALRLEREARKNTETMLLGYKEEAETLREALNIAAMDIAEAA 144
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A485L395_9STRA (Aste57867_15496 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L395_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.050e-18 Identity = 74/197 (37.56%), Postives = 105/197 (53.30%), Query Frame = 3
Query: 27 MGQFVESTEVQLVVAVLVLADIAANNALLLLPSKDDSKLAAMAFLPAARNLLQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVM 617
+G F+E E Q+V+ VL+L D+ A L+L ++L A P +LLQSF FT F F +EL L+ F+ FF GYC D V+ + E + RL L +R WR++RL L E H AT L AE++ + LE++ +E ++ ++ +L+ YKDEVDTL EAL IAA SVM
Sbjct: 29 VGAFIELRETQMVLIVLILLDVVGATAGLVLDLA--TQLDPDAVPPLVGHLLQSFGGFTSFVFVIELTALVWVFQLAFFTHVGYCIDFGVVVAAVSWELQRESKVLRL-LGLVRLWRIVRLVDTLLNDERTLHDATAALLEAEKQLTEKHAMTIHVLEDALEKEYAAKGQLNRVLQEYKDEVDTLKEALTIAAMSVM 222
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A6U2PDJ5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PDJ5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.250e-18 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3
Query: 30 GQFVESTEVQLVVAVLVLADIAANNALLLLPS--KDDSKLAA-----MAFLPAARNLLQSFTAFTLFFFALELAVLLVSFR-RRFFRQWGYCYDLCVIAVCLHAEAAGWPRT---FRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAAASVM 617
G+FVE EVQ V+ +L+ D+ A + +L+ KD + AA ++ + +L S +AF L F +EL L ++F R F GY DL VI++C+ E A F L LR WR+ RL AL + +AH+ T L A+ A R ++S E+E+RKRVE ML+GYKDEV+TLNEAL+IAA VM
Sbjct: 65 GEFVELFEVQSVIVLLIFLDLVATTSSMLIEITFKDVHENAASRAYIVSSVTTISKILNSASAFALAIFVVELLALCLTFGLRNFLSHPGYFIDLTVISLCILDEGAFSTAPISKFYHVLGFLRLWRLARLVRTALESAWNAHQETRASLDAKNEEAYRLSIELTRTKKSVELEIEARKRVEKMLQGYKDEVETLNEALEIAAYDVM 271
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Match: A0A5D6YBB2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBB2_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.190e-18 Identity = 79/201 (39.30%), Postives = 102/201 (50.75%), Query Frame = 3
Query: 42 ESTEVQLVVAVLVLADIAANNALLLL----------PSKDDSKLAAMAFLPAARNL---LQSFTAFTLFFFALELAVLLVSFRRRFFRQWGYCYDLCVIAVCLHAEAAGWPRTFRLSLTALRCWRVLRLFHAALAAETDAHKATCGQLAAERRRAAEAVAAAARLEESGRRELESRKRVEAMLRGYKDEVDTLNEALKIAA 605
ES E QL +L+ D++ + LLL P S A A R L L++ T FTL LEL VLL +FR RFF GY D V+ + L E + RL L LR WRV RL + + E AH T +L E+ + + A +ES RRE ESR +E +L+GYKDEV+TL EAL+IAA
Sbjct: 21 ESVEAQLAFVLLLALDVSCSTLALLLLRPPEPLAFSPQSTASVPLAAPIATAPRALMLLLEALTGFTLVASLLELVVLLAAFRSRFFAHAGYALDAGVVVIALVYELLTQSKALRL-LGVLRVWRVFRLVNTLIERERQAHDVTRDELEKEQLKVLQLGAEKVAAQESLRREYESRSGLEKLLQGYKDEVETLKEALQIAA 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1725.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1725.2.1 >prot_P-wetherbeei_contig1725.2.1 ID=prot_P-wetherbeei_contig1725.2.1|Name=mRNA_P-wetherbeei_contig1725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=314bp MGQFVESTEVQLVVAVLVLADIAANNALLLLPSKDDSKLAAMAFLPAARNback to top mRNA from alignment at P-wetherbeei_contig1725:5531..6684- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1725.2.1 ID=mRNA_P-wetherbeei_contig1725.2.1|Name=mRNA_P-wetherbeei_contig1725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1154bp|location=Sequence derived from alignment at P-wetherbeei_contig1725:5531..6684- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1725:5531..6684- >mRNA_P-wetherbeei_contig1725.2.1 ID=mRNA_P-wetherbeei_contig1725.2.1|Name=mRNA_P-wetherbeei_contig1725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig1725:5531..6684- (Phaeothamnion wetherbeei SAG_119_79)back to top |