mRNA_P-wetherbeei_contig17236.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17236.1.1
Unique NamemRNA_P-wetherbeei_contig17236.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A7G6U3Q9_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A7G6U3Q9_9BRAD)

HSP 1 Score: 490 bits (1261), Expect = 6.510e-173
Identity = 240/296 (81.08%), Postives = 269/296 (90.88%), Query Frame = 1
Query:    1 AECTQPGKIIVAYPPGSPDDVVARILAQKLSEAGERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            A+C+QP KIIV+YPPGSPDDV+ARILAQKLSEAG RFYVENLPGAGGMIGTATAA+ALPDGCTMVIVNQNFVVQ AIGEKLAYEVPDSFTPV +L++APETISV+PSVPATTIKELVALVKA+P KYNYASPGYGSSPHLASERL K TLGL++VHVPFQGGPPAVTSTVAGHTQILHL+LPIVAPLVRDGKLR+LAVA +TRAPEFP +PTL+EAGI +HEVGFW+ +++P+GTPDDIV  RHRQI +IM+LP+V DRL  LGY P++ S   F  HLQ ELSKWK IVRDG I+
Sbjct:   28 ADCSQPVKIIVSYPPGSPDDVIARILAQKLSEAGGRFYVENLPGAGGMIGTATAAKALPDGCTMVIVNQNFVVQPAIGEKLAYEVPDSFTPVTLLVAAPETISVNPSVPATTIKELVALVKASPAKYNYASPGYGSSPHLASERLFKQTLGLDVVHVPFQGGPPAVTSTVAGHTQILHLTLPIVAPLVRDGKLRLLAVADKTRAPEFPSIPTLEEAGIPNHEVGFWDAIMLPKGTPDDIVELRHRQIGQIMALPDVRDRLAGLGYTPINGSPNAFAAHLQTELSKWKAIVRDGKIK 323          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: UPI00199E4CE8 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI00199E4CE8)

HSP 1 Score: 469 bits (1206), Expect = 8.040e-165
Identity = 225/296 (76.01%), Postives = 263/296 (88.85%), Query Frame = 1
Query:    1 AECTQPGKIIVAYPPGSPDDVVARILAQKLSEAGERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            AEC Q  +IIV+YPPGS DDV+AR+LAQKLSEAG RFYVENLPGAGGMIGTA AARALPDGCTMVIVNQNFVVQSA+GEKL+Y+VPDSF PV +L++APETISV+P+VPAT+I+ELV LVKANPGKYNYASPG+GSSPHLASERL + TLGL++VHVPFQGGPPAVTSTVAGHTQILHL+LPIVAPLVRDG+LR+LAVA +TRA EFPDVPTL+EAGI DHEVGFWNG+++P GTPDD++  RHRQI  +M+LP + DRL  LGY P++ ++  F   LQ EL KWK IVRDG+++
Sbjct:   10 AECPQAVRIIVSYPPGSADDVIARLLAQKLSEAGGRFYVENLPGAGGMIGTAAAARALPDGCTMVIVNQNFVVQSAVGEKLSYQVPDSFVPVTLLVAAPETISVNPAVPATSIRELVELVKANPGKYNYASPGHGSSPHLASERLFRQTLGLDVVHVPFQGGPPAVTSTVAGHTQILHLTLPIVAPLVRDGRLRLLAVAGKTRAAEFPDVPTLEEAGIPDHEVGFWNGIILPGGTPDDMIDTRHRQIEHVMALPAIRDRLATLGYTPVNGTRNAFAVQLQSELGKWKAIVRDGHVK 305          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: UPI00143D37EC (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Tardiphaga sp. vice154 TaxID=2592814 RepID=UPI00143D37EC)

HSP 1 Score: 456 bits (1174), Expect = 1.140e-159
Identity = 220/296 (74.32%), Postives = 260/296 (87.84%), Query Frame = 1
Query:    1 AECTQPGKIIVAYPPGSPDDVVARILAQKLSEAGERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            AEC QP KIIV+YPPGSPDD++AR+LAQKLSEAG++ +VENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSA+G KL+Y+VPDS  PV +L++APETI+V+P++PAT IKEL+ALVKANPGKYNYASPGYGSSPHLASERL K TLGL++VHVPFQGGPPAVTSTVAGHTQ+LHL+LPIVAPLVRDGKLR+LAVA++TRAPEFPDVPTL+E+GI  HEV FWNG+++P+ TPDD +  R RQI  IM+L +V DRL  LGY P++     F  HLQ E+ KW+ IVRDG ++
Sbjct:   28 AECPQPIKIIVSYPPGSPDDMIARLLAQKLSEAGKQSHVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAMGVKLSYQVPDSLAPVTLLVAAPETIAVNPALPATNIKELIALVKANPGKYNYASPGYGSSPHLASERLFKQTLGLDVVHVPFQGGPPAVTSTVAGHTQLLHLTLPIVAPLVRDGKLRLLAVASKTRAPEFPDVPTLEESGIPSHEVEFWNGLMLPKETPDDKIDFRQRQIGRIMALQDVQDRLATLGYTPVNGPPNVFAAHLQTEVDKWRAIVRDGQVK 323          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: UPI001FF9B749 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. 190 TaxID=2782658 RepID=UPI001FF9B749)

HSP 1 Score: 312 bits (800), Expect = 8.250e-103
Identity = 159/294 (54.08%), Postives = 216/294 (73.47%), Query Frame = 1
Query:   13 QPGKIIVAYPPGSPDDVVARILAQKLSE-AGERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIRI 891
            +P K+IV Y  G+  DV+ARI+ QKLSE  G +FYVENLPGAG +IGT  AARA  DG T+++VNQ+FV+Q  +  K  Y+  ++F  VA L +APETISV PSVPAT+++EL+AL+KANPGKY+YASPGYG+SPH+A ERLLK    L++V VPFQGG  AV ST+AGHTQILH++LP+VA  +++GKLR LAVA   R+   PDVPTL EAGI+ HEVG+W G++VP  TPD IV   ++ + +++S  +V +RL  +G+ P+  +   F  H++ E ++W  ++   NIRI
Sbjct:   34 RPVKLIVPYGAGAAADVIARIVTQKLSEDIGAQFYVENLPGAGSVIGTLAAARAPADGYTLLLVNQDFVIQPLVKSKPGYDPFNNFIAVASLAAAPETISVHPSVPATSMEELIALLKANPGKYSYASPGYGTSPHIAVERLLKLGHNLDVVQVPFQGGGAAVMSTLAGHTQILHITLPLVAGHIQEGKLRGLAVADTKRSSLVPDVPTLNEAGIAKHEVGYWTGIMVPAATPDRIVSLLNQAVGKVLSSSDVKERLAKIGFEPMPGTAESFAHHIRAEAAEWGRVIARANIRI 327          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A537TGN0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TGN0_9PROT)

HSP 1 Score: 285 bits (730), Expect = 3.160e-92
Identity = 148/294 (50.34%), Postives = 203/294 (69.05%), Query Frame = 1
Query:   10 TQPGKIIVAYPPGSPDDVVARILAQKLSEA-GERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            T+P +IIV +  G P  V+A ++AQ LSE+ G+ FYVENLP     +G+ATAA++ PDG T+++V  +FV+  ++  KLAY+    FTPV + +++P  + V+PS PA  +KELVALVKANPGKY+YAS G G S  LA+E L K   GL+IVHVPF GG PAV ST+ GHTQ+   +LP  A L+++GKLR LAV +  RAPEFPDVPTL EAG    E  F+ G++ P GTP DIV + +R+I +I++ PEV DRL A+G+    +S  EF   L+ E ++W  ++RD NI+
Sbjct:   32 TRPVRIIVPFTAGGPATVMAHVIAQPLSESWGQSFYVENLPTGASNVGSATAAKSPPDGYTLLVVTPSFVINPSLYAKLAYDPIRDFTPVILAVASPHVLLVNPSFPAKNVKELVALVKANPGKYSYASAGTGQSAQLAAE-LFKLAFGLDIVHVPFNGGAPAVNSTMGGHTQMAFNALPSAAALIKEGKLRALAVTSGERAPEFPDVPTLAEAGAPGQESLFFQGIVAPAGTPKDIVDQLYREIEKILARPEVKDRLAAIGFGVTISSPEEFQVQLKAEAARWAKVIRDANIK 324          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A537NQ55_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NQ55_9PROT)

HSP 1 Score: 272 bits (696), Expect = 2.710e-87
Identity = 141/296 (47.64%), Postives = 199/296 (67.23%), Query Frame = 1
Query:   10 TQPGKIIVAYPPGSPDDVVARILAQKLSE-AGERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIRIQ 894
            T+P ++IV + PG P DV AR++AQKLSE AG +F+VEN+ GAGG IGT+ AA++ PDG TM++   N+VV  A+  +++Y+    F  V + ++A   ++V+PSVPA T+KELV L+KANPG Y YASPG G+ PHL  E L + +LGL+++HVPF GG PA T+             P V PLV+DGKLR LAVA + R+P  PD+PT+ EAG  D +   W  ++VP GTP +I+   HR I+ IM+LPE+T+RL  LGY P+  S AE    ++ E+++W  ++RD  I+ Q
Sbjct:   32 TRPVRVIVPFAPGGPTDVFARLMAQKLSEQAGAQFFVENMAGAGGNIGTSRAAQSAPDGYTMLVTGANYVVNPALYPQISYDPIRDFDTVTLAVTAAAVLTVTPSVPAQTVKELVELIKANPGTYTYASPGTGTPPHLVGE-LFRLSLGLDLLHVPFNGGGPATTA-------------PAV-PLVKDGKLRALAVATKKRSPALPDIPTMTEAGYPDIQGESWFVVVVPAGTPGEIIAMLHRDIARIMTLPEMTERLATLGYEPVVNSSAECAVLMKTEMARWTKVIRDAGIKAQ 312          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A1Q7B597_9PROT (Uncharacterized protein n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7B597_9PROT)

HSP 1 Score: 270 bits (690), Expect = 3.520e-86
Identity = 141/294 (47.96%), Postives = 199/294 (67.69%), Query Frame = 1
Query:   10 TQPGKIIVAYPPGSPDDVVARILAQKLSEA-GERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            T+  +IIV +  G P  V+A +LAQ L+E  G+ FYVENLP     +GTATAA+A  DG T++IV  +FV+  ++  KLAY+    FT VA+ +++P  + V+PS PA  +KELVALVKANPGKY+YAS G G S  LA+E L K   GL+++HVPF GG PA+ STV GHT I   +LP  A L+++GKLR LAV +  RAPEFP+VPTL E G+   E  F+ G++ P GTP +IV + +R+I+ I++ PEV +RL A+G+    +S  +F   ++ E+ +W  ++RD NI+
Sbjct:   32 TRSVRIIVPFTAGGPATVLAHVLAQPLTEIWGQSFYVENLPTGASNVGTATAAKAPADGYTLLIVTPSFVINPSLYAKLAYDPVRDFTAVALAVTSPHVLVVNPSFPAHNVKELVALVKANPGKYSYASAGTGQSAQLAAE-LFKLAFGLDLLHVPFNGGAPAMNSTVGGHTPIAFNALPSAAALIKEGKLRALAVTSGQRAPEFPEVPTLAEVGVPGQESLFFQGVVSPAGTPKEIVDQLYREIARILARPEVKERLAAIGFGVSISSPEQFQAQIKSEMERWAKVIRDANIK 324          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A537SG70_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SG70_9PROT)

HSP 1 Score: 270 bits (689), Expect = 5.140e-86
Identity = 138/292 (47.26%), Postives = 188/292 (64.38%), Query Frame = 1
Query:   13 QPGKIIVAYPPGSPDDVVARILAQKLSEA-GERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNI 885
            +P KIIV +    P DVVAR++AQKLSE  G +FY+EN+ GAGG +G   AA+A PDG T++ V+ +F V  ++  K  Y+    F PV     +P  + V P +PA ++KELV L++ANPGKY +ASPG G++PHL+SE L K T GL+    PF GG P++ S VAGHT +   ++P   PLV+DGKLR LAV A  R+P  PDVPTL E GI D E     G+LVP GTP  IV     +I+ I++LP+V D+L A G  P   SQA F  +++ +++KWK ++ D  I
Sbjct:   33 RPVKIIVPFAAAGPTDVVARLIAQKLSEKYGHQFYIENVTGAGGNLGMGAAAKAPPDGYTVLFVSSSFTVNPSLYAKPPYDAEKDFAPVTKAAGSPNGLFVHPDIPARSVKELVELIRANPGKYTFASPGIGTTPHLSSE-LFKLTFGLDFALAPFPGGAPSIQSVVAGHTPMCFQAIPPATPLVKDGKLRALAVTAAKRSPALPDVPTLDELGIKDQEAETMQGVLVPAGTPQPIVDLLQSEIARIVALPDVKDKLLATGLEPSGMSQAAFAAYIKTDIAKWKKVIEDAKI 323          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A537T924_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T924_9PROT)

HSP 1 Score: 270 bits (689), Expect = 7.040e-86
Identity = 140/294 (47.62%), Postives = 195/294 (66.33%), Query Frame = 1
Query:   10 TQPGKIIVAYPPGSPDDVVARILAQKLSEA-GERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            T+P +IIV +  G P  V+A ++AQ LSE  G+ FYVENLP     +GT TAA+A  DG T+++V  +FV+  ++  +LAY+    FTPV + +++P  + V+PS PA  + ELVAL KANPGKY+YAS G G S  LA+ER  K   GL+IVHVPF GG PA+ STV GHT I   +LP  A L+++GKLR LAV + +RAPEFPDVPTL EAG    E  F+ G++ P GTP  IV   +R+I +I++ PEV + L A+G+     S  +F   ++ E+++W  ++RD NI+
Sbjct:   43 TRPVRIIVPFAAGGPATVLAHVIAQPLSETFGQSFYVENLPTGASNVGTTTAAKAPADGHTLLVVTPSFVINPSLYARLAYDPIRDFTPVILAVTSPHVLIVNPSFPANNVAELVALAKANPGKYSYASAGTGQSAQLAAERF-KLAFGLDIVHVPFNGGAPAMNSTVGGHTPIAFNALPSAAALIKEGKLRALAVTSGSRAPEFPDVPTLAEAGAPGQESLFFQGIVAPAGTPKAIVDELYREIDKILARPEVKEHLAAIGFAVTIGSPQQFQAQIKSEVARWAKVIRDANIK 335          
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Match: A0A176YYE4_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium centrolobii TaxID=1505087 RepID=A0A176YYE4_9BRAD)

HSP 1 Score: 267 bits (682), Expect = 4.280e-85
Identity = 135/293 (46.08%), Postives = 190/293 (64.85%), Query Frame = 1
Query:   13 QPGKIIVAYPPGSPDDVVARILAQKLSEA-GERFYVENLPGAGGMIGTATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPETISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTLGLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAARTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEIMSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIR 888
            +P +IIV Y PG P+D VARI+A K+SE  G+  YVEN+P   G +GTATAARA  DG ++V+V  +F     +  KL Y+    F PV ++ +AP    V PS PA ++KE VALV+ANPGKY+YAS G G S HLA E + K   GL++VHVPF G   A+ S + GH  I  +SLP     +++GKLR LA+ + +R+   P+VPT+ EAG  D E  F  G+L P GTP DIV R +R+I++I++LPE+ DRL +LG  P+  + A F   ++ E+++W  ++RD  I+
Sbjct:   24 RPVRIIVPYAPGGPNDAVARIIAAKISEHWGQTLYVENIPAGAGNVGTATAARAPADGYSLVVVTSSFWSNPGLYAKLQYDPVKDFAPVTVIAAAPHVPLVHPSFPANSLKEFVALVRANPGKYSYASAGTGQSSHLAGE-MFKLAAGLDLVHVPFNGASAAMMSAIGGHVPIAFISLPAAVTFIKEGKLRGLAITSNSRSKLLPEVPTMAEAGFGDQESTFMQGILFPAGTPQDIVDRWYREIADIVALPEIRDRLTSLGLEPVVNTPASFAAQIKSEVARWSKVIRDARIK 315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17236.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7G6U3Q9_9BRAD6.510e-17381.08Tripartite tricarboxylate transporter substrate bi... [more]
UPI00199E4CE88.040e-16576.01Tripartite tricarboxylate transporter substrate bi... [more]
UPI00143D37EC1.140e-15974.32tripartite tricarboxylate transporter substrate-bi... [more]
UPI001FF9B7498.250e-10354.08tripartite tricarboxylate transporter substrate bi... [more]
A0A537TGN0_9PROT3.160e-9250.34Tripartite tricarboxylate transporter substrate bi... [more]
A0A537NQ55_9PROT2.710e-8747.64Tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q7B597_9PROT3.520e-8647.96Uncharacterized protein n=3 Tax=unclassified Alpha... [more]
A0A537SG70_9PROT5.140e-8647.26Tripartite tricarboxylate transporter substrate bi... [more]
A0A537T924_9PROT7.040e-8647.62Tripartite tricarboxylate transporter substrate bi... [more]
A0A176YYE4_9BRAD4.280e-8546.08Uncharacterized protein n=2 Tax=Bradyrhizobium cen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17236contigP-wetherbeei_contig17236:2..898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1298867.AUES01000007_gene4943
PFAMsTctC
Model size897
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.18e-82
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1R9BJ@1224|Proteobacteria,2U4Z4@28211|Alphaproteobacteria,3JVRQ@41294|Bradyrhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size897
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186111.5641024-CDS-P-wetherbeei_contig17236:1..8981683186111.5641024-CDS-P-wetherbeei_contig17236:1..898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17236 2..898 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17236.1.1prot_P-wetherbeei_contig17236.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17236 2..898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17236.1.1

>prot_P-wetherbeei_contig17236.1.1 ID=prot_P-wetherbeei_contig17236.1.1|Name=mRNA_P-wetherbeei_contig17236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=299bp
AECTQPGKIIVAYPPGSPDDVVARILAQKLSEAGERFYVENLPGAGGMIG
TATAARALPDGCTMVIVNQNFVVQSAIGEKLAYEVPDSFTPVAMLISAPE
TISVSPSVPATTIKELVALVKANPGKYNYASPGYGSSPHLASERLLKYTL
GLEIVHVPFQGGPPAVTSTVAGHTQILHLSLPIVAPLVRDGKLRMLAVAA
RTRAPEFPDVPTLQEAGISDHEVGFWNGMLVPRGTPDDIVIRRHRQISEI
MSLPEVTDRLKALGYMPLHTSQAEFVTHLQMELSKWKGIVRDGNIRIQ*
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mRNA from alignment at P-wetherbeei_contig17236:2..898+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17236.1.1 ID=mRNA_P-wetherbeei_contig17236.1.1|Name=mRNA_P-wetherbeei_contig17236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig17236:2..898+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGAATGCACCCAACCCGGTAAAATTATTGTCGCCTATCCGCCCGGGTC GCCCGATGACGTGGTCGCAAGAATACTGGCGCAAAAGCTGTCTGAAGCTG GCGAGCGGTTCTATGTCGAGAACCTGCCCGGGGCCGGCGGCATGATCGGC ACGGCGACGGCCGCCCGAGCGTTGCCCGACGGCTGCACGATGGTCATCGT CAATCAGAACTTCGTCGTGCAGTCGGCTATCGGTGAAAAGCTTGCTTACG AGGTGCCTGACAGCTTTACGCCGGTCGCCATGTTGATATCGGCGCCTGAA ACGATTTCCGTCAGCCCGTCCGTGCCGGCGACCACCATCAAGGAACTCGT CGCCCTGGTGAAGGCGAACCCCGGAAAGTATAATTACGCCTCGCCTGGCT ATGGTTCTTCACCCCATCTGGCGAGCGAGCGGCTCCTCAAATATACGCTC GGCCTCGAAATCGTGCACGTTCCATTTCAGGGTGGGCCGCCAGCCGTTAC CTCGACGGTTGCCGGTCATACCCAGATTTTGCATCTCTCTCTCCCGATCG TCGCGCCGCTGGTGCGTGACGGAAAGCTTCGGATGCTGGCGGTTGCCGCC AGAACGCGCGCGCCGGAATTCCCCGATGTTCCCACGCTGCAAGAGGCAGG CATATCGGATCACGAGGTCGGGTTCTGGAATGGAATGCTGGTTCCCAGGG GAACGCCTGACGACATCGTCATACGCAGGCATCGGCAAATCAGCGAGATC ATGTCGTTGCCTGAAGTCACGGATCGGCTAAAGGCGCTTGGATACATGCC ACTGCACACGTCGCAGGCCGAGTTTGTGACGCATCTTCAGATGGAGTTGT CCAAGTGGAAGGGAATTGTCCGTGACGGCAATATCAGGATTCAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17236:2..898+

>mRNA_P-wetherbeei_contig17236.1.1 ID=mRNA_P-wetherbeei_contig17236.1.1|Name=mRNA_P-wetherbeei_contig17236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig17236:2..898+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGAATGCACCCAACCCGGTAAAATTATTGTCGCCTATCCGCCCGGGTC
GCCCGATGACGTGGTCGCAAGAATACTGGCGCAAAAGCTGTCTGAAGCTG
GCGAGCGGTTCTATGTCGAGAACCTGCCCGGGGCCGGCGGCATGATCGGC
ACGGCGACGGCCGCCCGAGCGTTGCCCGACGGCTGCACGATGGTCATCGT
CAATCAGAACTTCGTCGTGCAGTCGGCTATCGGTGAAAAGCTTGCTTACG
AGGTGCCTGACAGCTTTACGCCGGTCGCCATGTTGATATCGGCGCCTGAA
ACGATTTCCGTCAGCCCGTCCGTGCCGGCGACCACCATCAAGGAACTCGT
CGCCCTGGTGAAGGCGAACCCCGGAAAGTATAATTACGCCTCGCCTGGCT
ATGGTTCTTCACCCCATCTGGCGAGCGAGCGGCTCCTCAAATATACGCTC
GGCCTCGAAATCGTGCACGTTCCATTTCAGGGTGGGCCGCCAGCCGTTAC
CTCGACGGTTGCCGGTCATACCCAGATTTTGCATCTCTCTCTCCCGATCG
TCGCGCCGCTGGTGCGTGACGGAAAGCTTCGGATGCTGGCGGTTGCCGCC
AGAACGCGCGCGCCGGAATTCCCCGATGTTCCCACGCTGCAAGAGGCAGG
CATATCGGATCACGAGGTCGGGTTCTGGAATGGAATGCTGGTTCCCAGGG
GAACGCCTGACGACATCGTCATACGCAGGCATCGGCAAATCAGCGAGATC
ATGTCGTTGCCTGAAGTCACGGATCGGCTAAAGGCGCTTGGATACATGCC
ACTGCACACGTCGCAGGCCGAGTTTGTGACGCATCTTCAGATGGAGTTGT
CCAAGTGGAAGGGAATTGTCCGTGACGGCAATATCAGGATTCAATGA
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