prot_P-wetherbeei_contig17231.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17231.1.1
Unique Nameprot_P-wetherbeei_contig17231.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length126
Homology
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: D7G6B4_ECTSI (Rab11B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B4_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 7.100e-62
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 0
Query:    2 SSLDYDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSFSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            SSL+YD L+KIVLVGDAAVGKTNLL  YTS DK  R DGT PSF   RK TVGVEFATM+V H DG RIKAQIWDTAGQERYRAITSSHYKRA+GALLV+DVT+R SFENA+ VWLREL+N+A+S
Sbjct:    5 SSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADS 129          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A6S9ECQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ECQ7_HETAK)

HSP 1 Score: 172 bits (437), Expect = 4.290e-52
Identity = 86/124 (69.35%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    3 SLDYDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSFSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            S  YDV+YKIVLVGD  VGKTNLL  +TS  K    +G   SF++ RK TVGVEFA+ IVKH +G RIKAQIWDTAGQERY AIT SHY+RAAGALLV+DVTNR+SF+NAKN WL+EL+ SA+S
Sbjct:   10 SEQYDVMYKIVLVGDPGVGKTNLLSCFTSYRKDTSENGAVVSFNENRKPTVGVEFASWIVKHPNGDRIKAQIWDTAGQERYNAITKSHYRRAAGALLVYDVTNRKSFDNAKNWWLKELKESADS 133          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A024U937_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U937_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.570e-48
Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPS---FSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T++D+    D +  +   FS+ RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV++R SF+NA+  WL+ELRNSA++
Sbjct:    8 YDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADT 131          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A024UAY6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAY6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.190e-48
Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPS---FSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T++D+    D +  +   FS+ RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV++R SF+NA+  WL+ELRNSA++
Sbjct:    8 YDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADT 131          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A485LBE8_9STRA (Aste57867_18857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.090e-47
Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPS---FSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T++D     D +  +   FS+ RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV++R SF+NA++ WL+ELRNSA++
Sbjct:   36 YDELYKVVLVGDPGVGKTNLLAYFTASDDEMAIDTSTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQSHWLKELRNSADT 159          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A1W0A2A3_9STRA (Rab11/RabA-family small GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 9.910e-47
Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPS---FSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T+ ++    D    +   FS  RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DVT++ +FENA+  WL+ELRNSA+S
Sbjct:    4 YDELYKVVLVGDPGVGKTNLLAYFTATEEEMAMDAETNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTSKATFENAQCHWLKELRNSADS 127          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A6G0WZ29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ29_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.110e-46
Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPS---FSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T+ +     D +  +   FS  RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV++R +F+NA++ WL+ELRNSA++
Sbjct:    9 YDELYKVVLVGDPGVGKTNLLAYFTATEDEMAIDSSTNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRSTFDNAQSHWLKELRNSADT 132          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A067CD03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD03_SAPPC)

HSP 1 Score: 156 bits (394), Expect = 1.560e-45
Identity = 76/125 (60.80%), Postives = 97/125 (77.60%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSF----SDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSAES 126
            YD LYK+VLVGD  VGKTNLL Y+T+ ++    D +  +     S  RK T+GVEF T I+ H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV++R +F+NA+  WL+ELRNSA++
Sbjct:    4 YDELYKVVLVGDPGVGKTNLLAYFTATEEEMAVDASTNASKIFSSSVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRATFDNAQTHWLKELRNSADN 128          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A3R7GTT6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GTT6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.760e-45
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 0
Query:    1 MSSLDYDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSFSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSA 124
            M+   YD LYK+VLVGD  VGKTNLL  + ++D     +G + +FS  RK T+GVEF T IV H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+VFDVTNR SF+NA+  W +EL+ SA
Sbjct:    1 MNEHHYDELYKVVLVGDPGVGKTNLLATFLASDAVTE-EGISRTFSAVRKPTIGVEFGTAIVHHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVFDVTNRASFDNAQEHWFKELKASA 123          
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Match: A0A0P1AJW8_PLAHL (Rab other n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJW8_PLAHL)

HSP 1 Score: 155 bits (393), Expect = 1.970e-45
Identity = 78/119 (65.55%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    6 YDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSFSDTRKATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTNRRSFENAKNVWLRELRNSA 124
            YD LYK+VLVGD  VGKTNLL  + +A+      G + SFS  R AT+GVEFAT I++H +G RIKAQIWDTAGQERYRAITSSHY+RAAGAL+VFDVT R SF NA+  WL+EL+ +A
Sbjct:    5 YDELYKVVLVGDPGVGKTNLLATFLAAET-VNEQGISRSFSADRNATIGVEFATTIIRHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVFDVTKRESFNNAQEYWLKELKAAA 122          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17231.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B4_ECTSI7.100e-6278.40Rab11B, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6S9ECQ7_HETAK4.290e-5269.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024U937_9STRA1.570e-4863.71Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A024UAY6_9STRA4.190e-4863.71Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A485LBE8_9STRA2.090e-4763.71Aste57867_18857 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0A2A3_9STRA9.910e-4763.71Rab11/RabA-family small GTPase n=1 Tax=Thraustothe... [more]
A0A6G0WZ29_9STRA2.110e-4662.10Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067CD03_SAPPC1.560e-4560.80Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3R7GTT6_9STRA1.760e-4563.71Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1AJW8_PLAHL1.970e-4565.55Rab other n=1 Tax=Plasmopara halstedii TaxID=4781 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 63..85
score: 50.97
coord: 44..60
score: 29.71
coord: 10..31
score: 44.92
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 10..126
e-value: 1.4E-14
score: 64.5
NoneNo IPR availablePANTHERPTHR47979DRAB11-RELATEDcoord: 1..125
NoneNo IPR availablePANTHERPTHR47979:SF39GTP-BINDING PROTEIN, PUTATIVE-RELATEDcoord: 1..125
NoneNo IPR availablePROSITEPS51419RABcoord: 5..126
score: 20.144844
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 12..126
e-value: 0.0026
score: -74.5
IPR001806Small GTPasePFAMPF00071Rascoord: 11..125
e-value: 9.9E-29
score: 100.0
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..125
e-value: 6.1E-19
score: 66.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..126
e-value: 1.5E-36
score: 127.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17231contigP-wetherbeei_contig17231:6..925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17231.1.1mRNA_P-wetherbeei_contig17231.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17231 6..925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17231.1.1 ID=prot_P-wetherbeei_contig17231.1.1|Name=mRNA_P-wetherbeei_contig17231.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
MSSLDYDVLYKIVLVGDAAVGKTNLLGYYTSADKHPRADGTAPSFSDTRK
ATVGVEFATMIVKHADGTRIKAQIWDTAGQERYRAITSSHYKRAAGALLV
FDVTNRRSFENAKNVWLRELRNSAES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase