mRNA_P-wetherbeei_contig172.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.610e-18 Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 7 RRLANHALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTID-GGRLTGLNLLCNDLAGDLPASLGDLVTLRELNLSYN 240
RR+AN LQ+L++ L G W+ GWL PGS V WHG+TI G L +NL+ NDL G++P SL +L +L+ LNLSYN
Sbjct: 33 RRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLEGEMPESLCNLYSLQHLNLSYN 111
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: UPI000360351A (hypothetical protein n=1 Tax=Dyadobacter beijingensis TaxID=365489 RepID=UPI000360351A) HSP 1 Score: 66.2 bits (160), Expect = 7.840e-11 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLV---PGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLVTLRELNLSY 237
AL L+ + +GP W GW PG S GW+GVT +GGR+TGLNLL + L G +P ++G+L L+ L L +
Sbjct: 28 ALIALYNATNGPEWYEKAGWNPNGNPGDSPCGWYGVTCEGGRVTGLNLLQSGLDGSIPPAIGNLDQLKTLILGW 101
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A1I1LDE3_9BACT (Immunoglobulin domain-containing protein n=1 Tax=Spirosoma endophyticum TaxID=662367 RepID=A0A1I1LDE3_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 8.030e-11 Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 28 LQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDG-GRLTGLNLLCNDLAGDLPASLGDLVTLRELNL 231
L L+ S G W TGWL G S GW+GVT DG GR+TGLNL+ N+L G LP SL L +L+ L L
Sbjct: 498 LVNLYNSAGGGNWTNKTGWLS-GCSPCGWYGVTCDGNGRVTGLNLINNNLVGTLPTSLSALTSLKSLEL 565
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A1W9X1W5_9DELT (Fibronectin type-III domain-containing protein n=1 Tax=Desulfobacteraceae bacterium 4572_88 TaxID=1972444 RepID=A0A1W9X1W5_9DELT) HSP 1 Score: 65.5 bits (158), Expect = 1.420e-10 Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGG-RLTGLNLLCNDLAGDLPASL-GDLVTLRELNLSYNH 243
AL + S G W + TGWL G + W G+T +GG +T +NL+ N+L G+LP SL DL L+ELNL NH
Sbjct: 37 ALINFYNSTAGSDWNVKTGWLGNGGTECDWEGITCEGGDTVTAINLVFNNLVGNLPVSLLADLSNLQELNLFGNH 111
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A239EXT0_9BACT (Repeat domain-containing protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239EXT0_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 3.920e-10 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLVTLRELNL 231
AL ++S +G W N WL PG V W GV+++ R+ GL+L N L+G LP +GDL +LR LNL
Sbjct: 1340 ALVAFYQSTNGDNWFDNNNWLQPGRYVEEWLGVSVENNRVIGLDLRGNGLSGTLPPEIGDLDSLRVLNL 1408
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A6L7YXK5_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L7YXK5_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 5.120e-10 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTID-GGRLTGLNLLCNDLAGDLPASLGDLVTLRELNLS 234
AL+ L+++ +G WR N+GWL P + ++ WHGV D GR+T L L N+L G +P LG+L +LR L LS
Sbjct: 90 ALEALYQAAEGDNWRRNSGWLGP-APLAEWHGVETDEAGRVTTLVLSQNELKGTIPPELGELSSLRRLELS 159
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A850NLA8_9FLAO (Ig-like domain-containing protein n=1 Tax=Muricauda chongwuensis TaxID=2697365 RepID=A0A850NLA8_9FLAO) HSP 1 Score: 63.5 bits (153), Expect = 7.230e-10 Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTG------WLVPGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLV 210
ALQ+L+ + +GP W T W G+ S WHGVT+ G +T LNL N+L G++PAS+GDLV
Sbjct: 29 ALQDLYNATNGPTWISETDVFLGDDWNFAGNVTSDWHGVTVANGHVTELNLESNELEGNIPASIGDLV 96
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A271IY82_9BACT (Uncharacterized protein n=2 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271IY82_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 1.340e-9 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLVTLREL 225
AL L+E+ GP W + WL V+ WHGVT++GGR+T ++L N L+G LPA +G + L L
Sbjct: 422 ALVALYEATGGPNWTTDENWLT--GPVASWHGVTVEGGRVTRISLNENQLSGSLPAEIGQMSRLERL 486
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A7X8XYY7_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Flammeovirga agarivorans TaxID=2726742 RepID=A0A7X8XYY7_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 1.340e-9 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 25 ALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLVTLRELNLSYNHEV 249
AL L+ L G W N+ WL + V+ W GVT++ G++TGLNL +L+G LP ++ L L+ LNLS N ++
Sbjct: 235 ALTTLYSELKGKIWNDNSNWLK-NTDVNTWEGVTVESGKVTGLNLFNQNLSGILPDAITSLTNLKTLNLSSNPQL 308
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Match: A0A1G0B415_9BACT (Uncharacterized protein n=1 Tax=Flavobacteria bacterium RIFCSPLOWO2_12_FULL_35_11 TaxID=1798016 RepID=A0A1G0B415_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 2.300e-9 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 13 LANHALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGGRLTGLNLLCNDLAGDLPASLGDLVTLR 219
L +AL +LH+S G W IN W + VS WHG+T++ +T +NL N+L G +PA++G+L +LR
Sbjct: 25 LEKNALLDLHKSTKGTTWNIN--WDLT-KDVSSWHGITVENNTVTEINLSMNNLTGSIPATIGNLTSLR 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig172.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig172.1.1 >prot_P-wetherbeei_contig172.1.1 ID=prot_P-wetherbeei_contig172.1.1|Name=mRNA_P-wetherbeei_contig172.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp MVRRLANHALQELHESLDGPRWRINTGWLVPGSSVSGWHGVTIDGGRLTGback to top mRNA from alignment at P-wetherbeei_contig172:33..281- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig172.1.1 ID=mRNA_P-wetherbeei_contig172.1.1|Name=mRNA_P-wetherbeei_contig172.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig172:33..281- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig172:33..281- >mRNA_P-wetherbeei_contig172.1.1 ID=mRNA_P-wetherbeei_contig172.1.1|Name=mRNA_P-wetherbeei_contig172.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig172:33..281- (Phaeothamnion wetherbeei SAG_119_79)back to top |