mRNA_P-wetherbeei_contig1719.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1719.4.2
Unique NamemRNA_P-wetherbeei_contig1719.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6H5JX30_9PHAE (Citrate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX30_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 6.590e-156
Identity = 222/259 (85.71%), Postives = 243/259 (93.82%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            I +MPEVAALIYRCKFKDG + KD S DY+GN+C+M+GY+D +F +LMR+YLVIHSDHEGGNASAHATHLVGSTLSD Y+SYAAG+ ALAGPLHGLANQEVLGWIKDL+A FKAKGKEV+ +TIEEFAWETLNSGKVIPGYGHAVLRKTDPRY AQR+FALKHLPDD+LFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSG LLCHY+F E+DYYTVLFGVSRGIGALSQLFWDRALGLPLERPKS+TPE+LWE A K
Sbjct:  202 IAKMPEVAALIYRCKFKDGVVKKDLSLDYTGNYCSMMGYNDKSFQDLMRLYLVIHSDHEGGNASAHATHLVGSTLSDAYMSYAAGIGALAGPLHGLANQEVLGWIKDLEAHFKAKGKEVSHETIEEFAWETLNSGKVIPGYGHAVLRKTDPRYMAQRQFALKHLPDDDLFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGVLLCHYDFTEHDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSVTPEWLWEHAKK 460          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A835YLV9_9STRA (Citrate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV9_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 2.150e-147
Identity = 213/257 (82.88%), Postives = 230/257 (89.49%), Query Frame = 2
Query:  608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            ++PE+AALIYRC++ DG++ KD S DYSGNFC MLG+ DP F ELMR+Y+VIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGL ALAGPLHGLANQEVLGWI  LQA+FK  GK VNK TIEEF   TLNSGKVIPGYGHAVLRKTDPRY AQR+FALKHLPDD LF IVST+YEVVPGVLTKLGKVKNPWPNVDAHSG LLCHY F ++DYYTVLFGVSR +GALSQLFWDRALGLPLERPKS+TPEFLW  ATK
Sbjct:  201 RLPEIAALIYRCRYADGQVKKDLSLDYSGNFCRMLGFTDPTFDELMRLYMVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLCALAGPLHGLANQEVLGWILQLQAEFKKAGKPVNKDTIEEFTLATLNSGKVIPGYGHAVLRKTDPRYEAQRQFALKHLPDDPLFHIVSTVYEVVPGVLTKLGKVKNPWPNVDAHSGVLLCHYGFTQHDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSVTPEFLWSQATK 457          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S1UKD8_9STRA (Citrate synthase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKD8_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 3.660e-135
Identity = 199/259 (76.83%), Postives = 223/259 (86.10%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            + ++P +AALIYRC +KDG L+ D S DYSGNF  MLGYD+P F ELMR+Y+ IHSDHEGGNASAH THLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVL WI+ L+  F AKG E N +TI EFAW TLNSGKVIPGYGHAVLRKTDPRYT QREFALK++PDD LFKIV TIY+V+PGVLT+ GK KNPWPNVD+HSG LL HY F E  YYTVLFGVSR +GAL+Q+FWDRALGLPLERPKS+TPE+L EFA+K
Sbjct:  219 VAKLPVIAALIYRCSYKDGNLTMDKSLDYSGNFSRMLGYDNPDFDELMRLYICIHSDHEGGNASAHTTHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLRWIQALKEDFDAKGIEPNPETITEFAWSTLNSGKVIPGYGHAVLRKTDPRYTCQREFALKYMPDDPLFKIVDTIYDVMPGVLTEHGKTKNPWPNVDSHSGVLLWHYGFTEYQYYTVLFGVSRAMGALAQVFWDRALGLPLERPKSVTPEWLKEFASK 477          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6T2F9S7_9EUGL (Citrate synthase n=4 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2F9S7_9EUGL)

HSP 1 Score: 418 bits (1074), Expect = 8.150e-135
Identity = 194/262 (74.05%), Postives = 229/262 (87.40%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFA--TKK 1381
            I ++P++A+L+YRC + DGK+ +D  SD+SGNFC MLGY+DP+F ELMR+Y+VIHSDHEGGNASAHAT L GSTLSDPYL+Y  GL+ALAGPLHGLANQEVL WI++LQA+FKA+G+ V  +TI EFAW+TL SGK+IPGYGHAVLRKTDPRYT QREF LKH+PDDELFKIV TIY+V+PG+LT+ GK KNP+PNVD+HSG LL HY F + DYYTVLFGVSR +GALSQLFWDRALGLPLERPKSLTPE++  FA  TKK
Sbjct:  210 ISKLPKIASLVYRCTYHDGKIVEDRGSDFSGNFCRMLGYNDPSFDELMRLYMVIHSDHEGGNASAHATRLCGSTLSDPYLAYVGGLSALAGPLHGLANQEVLRWIQELQAKFKAEGRAVTAETITEFAWDTLKSGKIIPGYGHAVLRKTDPRYTCQREFGLKHMPDDELFKIVDTIYQVMPGILTEHGKTKNPYPNVDSHSGVLLWHYGFTQYDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSLTPEWIENFAKNTKK 471          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A1Z5KSV8_FISSO (Citrate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSV8_FISSO)

HSP 1 Score: 415 bits (1067), Expect = 7.650e-134
Identity = 193/259 (74.52%), Postives = 224/259 (86.49%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            + Q+PE+AA IYR  + DG + KD S DYSGNFC MLGYDDP+F ELMR+YL IH+DHEGGNASAHATHLVGSTLSDPYLSY+ GLNALAGPLHGLANQEVL WI++L+++F A+GKEVN ++I EFAWETL +GKVIPGYGHAVLRKTDPRYT QREFALKH+PDD LFK+V TIY+V+PG+L + GKV NP+PNVD+HSG LL HY F +  YYTVLFGVSR +GALSQL+WDRALGLPLERPKS+TPE+LW    K
Sbjct:  208 VAQLPEIAATIYRNVYFDGTVDKDLSLDYSGNFCRMLGYDDPSFDELMRLYLCIHTDHEGGNASAHATHLVGSTLSDPYLSYSGGLNALAGPLHGLANQEVLKWIQELKSKFDAEGKEVNAESITEFAWETLKAGKVIPGYGHAVLRKTDPRYTCQREFALKHIPDDPLFKLVDTIYQVMPGILKEHGKVANPYPNVDSHSGVLLWHYGFTQYQYYTVLFGVSRAVGALSQLYWDRALGLPLERPKSVTPEWLWSQVQK 466          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S2CEC0_9STRA (Citrate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CEC0_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 4.860e-133
Identity = 192/251 (76.49%), Postives = 222/251 (88.45%), Query Frame = 2
Query:  608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
            ++PE+AA+IYR  + DG ++KD S DYSGNFC MLGYD+  F ELMR+YL IHSDHEGGNASAHATHL+GSTL+DPY+SYA GLNALAGPLHGLANQEVLGWI++L  +FK++GKEV K+ I EF WETLNSG+VIPGYGHAVLRKTDPRYT QREFALKH+PDDELFK+VSTIYEVVP +L + GK  NP+PNVD+HSG LL HYNF +NDYYTVLFGVSR +GALSQLFWDRALGLPLERPKS+T E++
Sbjct:  214 KVPEIAAIIYRNVYFDGVVNKDHSLDYSGNFCRMLGYDNEGFDELMRLYLTIHSDHEGGNASAHATHLIGSTLADPYISYAGGLNALAGPLHGLANQEVLGWIQELDRKFKSEGKEVTKENITEFTWETLNSGQVIPGYGHAVLRKTDPRYTCQREFALKHMPDDELFKLVSTIYEVVPDILLEHGKAANPYPNVDSHSGVLLWHYNFTQNDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSVTSEWI 464          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S4J631_9STRA (Citrate synthase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J631_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 1.180e-131
Identity = 192/259 (74.13%), Postives = 223/259 (86.10%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            I ++PE+AA+IYR  + DG ++KD + DYSGNFC MLGYD+P+F ELMR+YL IH+DHEGGNASAH THLVGSTL+DPYLSYAAGLNALAGPLHGLANQEVL WI+ L  +F A+GKEVN +TI EFAWETLN+ KVIPGYGHAVLRKTDPRYT QREFALKHLPDDELFK+V TIY+V+PG+LT+ GKV NP+PNVD+HSG LL HY F +  YYTVLFGVSR +G L QL+WDRALGLPLERPKS+TP++LW    K
Sbjct:  214 IAKIPEIAAVIYRNVYFDGVVNKDHTLDYSGNFCRMLGYDNPSFDELMRLYLCIHTDHEGGNASAHTTHLVGSTLADPYLSYAAGLNALAGPLHGLANQEVLKWIQALSDRFAAEGKEVNAETITEFAWETLNAKKVIPGYGHAVLRKTDPRYTCQREFALKHLPDDELFKVVDTIYQVMPGILTEHGKVSNPYPNVDSHSGVLLWHYGFTQFQYYTVLFGVSRAVGGLCQLYWDRALGLPLERPKSVTPDWLWSQVKK 472          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A482RUQ9_9ARCH (Citrate synthase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUQ9_9ARCH)

HSP 1 Score: 402 bits (1032), Expect = 1.540e-131
Identity = 192/261 (73.56%), Postives = 221/261 (84.67%), Query Frame = 2
Query:  602 IDQMPEVAALIYRCKFKDGKLSKDASS--DYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
            I ++PE+AAL+YRC +KDG L KD +   DYS +F  MLGY+DP F ELMR+YLVIHSDHEGGNASAH THLVGSTL+DPYLS+AAGLNALAGPLHGLANQEVLGWI  LQ +F+ +GK V K+TI EFAWETL +GKVIPGYGHAVLRKTDPRY  QR+FALKHLP D LF+IVSTIYEV+PGVLT+ GK KNP+PNVD+HSG LL HY   E  YYTVLFGVSR +GALSQ+FWDRAL LPLERPKS+TPE++ ++  K
Sbjct:    5 IAKLPEIAALVYRCSYKDGMLVKDTTGKLDYSASFNRMLGYNDPKFDELMRLYLVIHSDHEGGNASAHTTHLVGSTLADPYLSFAAGLNALAGPLHGLANQEVLGWILALQKKFQQEGKAVTKETITEFAWETLKAGKVIPGYGHAVLRKTDPRYECQRQFALKHLPSDPLFQIVSTIYEVMPGVLTEHGKTKNPYPNVDSHSGVLLWHYGLREYQYYTVLFGVSRAMGALSQVFWDRALALPLERPKSVTPEYIVDYFKK 265          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S3Q5G2_9STRA (Citrate synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5G2_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 3.460e-131
Identity = 189/250 (75.60%), Postives = 221/250 (88.40%), Query Frame = 2
Query:  611 MPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
            +PE+AA IYR  + DG ++KD S DYSGNFC MLGYD+P+F ELMR+YL IH+DHEGGNASAHATHLVGSTLSDPYL+YA GLNALAGPLHGLANQEVL WI++L ++F ++GKEVN +TI EFAW+TLN+GKVIPGYGHAVLRKTDPRYT QREFALKH+PDDELFK+V TIY V+PG+LT+ GK  NP+PNVD+HSG LL HY F +  YYTVLFGVSR +GALSQL+WDRALGLPLERPKS+TPE++
Sbjct:  208 LPEIAAQIYRNVYFDGVVTKDHSLDYSGNFCRMLGYDNPSFDELMRLYLCIHTDHEGGNASAHATHLVGSTLSDPYLAYAGGLNALAGPLHGLANQEVLKWIQELNSKFGSEGKEVNAETITEFAWDTLNAGKVIPGYGHAVLRKTDPRYTCQREFALKHMPDDELFKVVDTIYSVMPGILTEHGKTANPYPNVDSHSGVLLWHYGFTQYQYYTVLFGVSRAVGALSQLYWDRALGLPLERPKSVTPEWI 457          
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6U3QNZ0_9STRA (Citrate synthase n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3QNZ0_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 5.380e-131
Identity = 190/251 (75.70%), Postives = 221/251 (88.05%), Query Frame = 2
Query:  608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
            ++PE+AA IYR  + DG ++KD S DYSGNFC MLGY+DP+F ELMR+YL IH+DHEGGNASAH THLVGSTL+DPYLSY+AGLNALAGPLHGLANQEVL WI++L A+F ++GKEVN +TI EFAWETLN+ KVIPGYGHAVLRKTDPRYT QREFALKHLPDDELFK+V TIY+V+PG+LT+ GKV NP+PNVD+HSG LL HY F +  YYTVLFGVSR +G L QL+WDRALGLPLERPKS+TPE+L
Sbjct:  211 KIPEIAATIYRNVYFDGVVTKDQSLDYSGNFCRMLGYNDPSFDELMRLYLCIHTDHEGGNASAHTTHLVGSTLADPYLSYSAGLNALAGPLHGLANQEVLKWIQELSARFASEGKEVNAETITEFAWETLNAKKVIPGYGHAVLRKTDPRYTCQREFALKHLPDDELFKVVDTIYQVMPGILTEHGKVSNPYPNVDSHSGVLLWHYGFTQFQYYTVLFGVSRAVGGLCQLYWDRALGLPLERPKSVTPEWL 461          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JX30_9PHAE6.590e-15685.71Citrate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/... [more]
A0A835YLV9_9STRA2.150e-14782.88Citrate synthase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S1UKD8_9STRA3.660e-13576.83Citrate synthase n=2 Tax=Phaeomonas parva TaxID=12... [more]
A0A6T2F9S7_9EUGL8.150e-13574.05Citrate synthase n=4 Tax=Eutreptiella gymnastica T... [more]
A0A1Z5KSV8_FISSO7.650e-13474.52Citrate synthase n=2 Tax=Fistulifera solaris TaxID... [more]
A0A7S2CEC0_9STRA4.860e-13376.49Citrate synthase n=1 Tax=Dictyocha speculum TaxID=... [more]
A0A7S4J631_9STRA1.180e-13174.13Citrate synthase n=2 Tax=Odontella aurita TaxID=26... [more]
A0A482RUQ9_9ARCH1.540e-13173.56Citrate synthase n=1 Tax=archaeon TaxID=1906665 Re... [more]
A0A7S3Q5G2_9STRA3.460e-13175.60Citrate synthase n=1 Tax=Chaetoceros debilis TaxID... [more]
A0A6U3QNZ0_9STRA5.380e-13175.70Citrate synthase n=3 Tax=Lithodesmiaceae TaxID=492... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1719contigP-wetherbeei_contig1719:3110..6342 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr30145
PFAMsCitrate_synt
Model size2460
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00004,RC00067
KEGG koko:K01647
KEGG ReactionR00351
KEGG Pathwayko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00009,M00010,M00012,M00740
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.5e-137
EggNOG OGsCOG0372@1|root,KOG2617@2759|Eukaryota,2XD9M@2836|Bacillariophyta
EC2.3.3.1
DescriptionBelongs to the citrate synthase family
Cds size1020
COG categoryH
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1719.4.2prot_P-wetherbeei_contig1719.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1719 4186..5978 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.3684525-UTR-P-wetherbeei_contig1719:3109..41851683186110.3684525-UTR-P-wetherbeei_contig1719:3109..4185Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1719 3110..4185 -
1683186110.4119794-UTR-P-wetherbeei_contig1719:5978..63421683186110.4119794-UTR-P-wetherbeei_contig1719:5978..6342Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1719 5979..6342 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.3772867-CDS-P-wetherbeei_contig1719:4185..44011683186110.3772867-CDS-P-wetherbeei_contig1719:4185..4401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1719 4186..4401 -
1683186110.3849971-CDS-P-wetherbeei_contig1719:4702..48611683186110.3849971-CDS-P-wetherbeei_contig1719:4702..4861Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1719 4703..4861 -
1683186110.39227-CDS-P-wetherbeei_contig1719:5085..51751683186110.39227-CDS-P-wetherbeei_contig1719:5085..5175Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1719 5086..5175 -
1683186110.4016898-CDS-P-wetherbeei_contig1719:5423..59781683186110.4016898-CDS-P-wetherbeei_contig1719:5423..5978Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1719 5424..5978 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1719.4.2

>prot_P-wetherbeei_contig1719.4.2 ID=prot_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=340bp
MMTAAAAVIAWTNYDYDGGDDCGGNDGCGDGLAAARRRLDGAWRRRVKRR
RRRNRADFQPTPVRINSGTGSAGYLTNWAIDQMPEVAALIYRCKFKDGKL
SKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLV
GSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNK
QTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFK
IVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFG
VSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATKK*
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mRNA from alignment at P-wetherbeei_contig1719:3110..6342-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1719.4.2 ID=mRNA_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3233bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:3110..6342- (Phaeothamnion wetherbeei SAG_119_79)
GCTTTGACGGGGACAAGATGAGACGCGGATCGCCGAATCGCCGCCAGCGG CGCCGCCGCCGCCGTCGCTGCTTGCTGCTGTGCTTCTCGAACCCCATTTG TTGTGGCCTTAGCCTCCTGTTTTTCCGTGTTTGGGGGGCTTCATCGCTTT TCTTTCTGTGCTGACACAATTTTTCGAGTTCGTTTTATCCGGCGCCTCTG CGTTGCTGCGTTCGGATCTTGCCGTTCTCGCTAACCAATCTATCGCTCCG TTGCACAGTGACCGATCATGGTTTTTTCGTAGTGTAATCCTTTCCCCTCT TCTCTCTCGCGGTCCCGCATCGGCAATTTGCTATTCTCGGTCGACGGGCG GACTGATCGCGCCGATGATGACGGCGGCGGCGGCGGTGATCGCATGGACT AATTATGATTATGATGGCGGCGATGACTGCGGTGGCAACGATGGCTGCGG CGACGGCTTGGCGGCGGCTCGGCGGCGACTCGACGGCGCATGGCGGCGGC GCGTGAAACGGCGTCGGCGACGGAATCGGGCTGACTTTCAACCAACCCCG GTACGAATTAATTCCGGGACCGGATCTGCCGGATATTTGACCAATTGGGC AATCGATCAGATGCCCGAGGTGGCGGCGCTGATCTACCGCTGCAAGTTCA AGGATGGCAAGCTCTCCAAGGACGCCTCCTCCGACTACTCGGGCAACTTC TGCGCAATGCTCGGCTACGACGATCCGGCCTTCGCCGAGCTGATGCGCAT CTACCTCGTCATTCACTCGGACCACGAGGGCGGCAACGCATCGGCGCACG CGACGCACCTGGTTGGATCGACGCTGTCCGACCCGTATTTGAGCTACGCG GCGGGGCTCAACGCGCTGGCTGGTCCACTGCACGGGCTGGCCAACCAGGA GGTCCTCGGCTGGATCAAGGTCCGTTTCCGGTTTCTGGAGATATCCTGTG TTTTGGCTTTGATTTTGATTTTGAAACGTTCTCCGTGCTTTCTGCTAAAT CTGGGCTCATGTTTTTGGTCTGTATCGAATTTCTTCCGACGAAACTCAGA AGGTGGCACATGACGAGAGCGCGAAATGCCGACAAAAGCTCCTTGGAATC CTTTTCCTTTCTTGCTCCTGCCCCCCAATTCTGGTTCTGTCTTTTTATGT CTGAGGGCCGTCTGCAGGACTTGCAGGCGCAGTTCAAGGCGAAGGGCAAG GAGGTCAACAAGCAGACCATCGAAGAGTTCGCCTGGGAGACCCTCAACTC CGGCAAGGTCGGTCAAAAAAGGAGACGAGGAAGCAACCAAGGGGAAGGAT AAGGGTGCGGCAACTTGTCGCTTCCCGGCCCGCTGTAACTGTCCTTTTCC CTCAAACTCCGTCCGAATTCGGTCCTCCCCTCTCTTTCCTCTTTTCTTTT CCCTCTATGACCTTAGCAAAACCGCCGTGGTCGTCCACCGTCGCGCCCTA CGCCACCATCTCATTACTGCCGTCACAACAGGTGATCCCGGGATACGGGC ACGCGGTGCTGCGCAAGACAGACCCACGCTACACTGCGCAGCGCGAGTTT GCGCTGAAGCACCTCCCGGACGACGAGCTCTTCAAGATCGTCTCCACCAT CTACGAGGTCGTGCCCGGCGTCCTCACCAAGCTCGGCAAGGTAAAGCAAT GACAGCAGGCTGAAGGCGGCTGGAAACGGTTGGAAACAAGACAGCAACGG CTAAAACAGTGGATCGAGAAAAGCGGTTCAAAAAAATCTATTTGAGGTGA CAGTTGAAACGGCACACGCGTTGAAAAGCTGTTTGGCGCTTCGGTGTGTT TGGTTCATACATTTGGTTCGAGGTCAAATGGCATCGTTTCGGCTTCCCCT TTTCACCATTTCCAACATCTTCGGCACACACATCCAGACACTTCCTTCTC CCCCAAATCCTTCACATCTTCCAAAACCCCCAAAACCACAGGTCAAGAAC CCGTGGCCGAACGTGGACGCCCATTCGGGCGCGCTGCTCTGCCATTACAA CTTCATGGAGAACGACTACTACACGGTGCTCTTCGGCGTCAGCCGCGGCA TCGGCGCCCTCTCGCAGCTCTTCTGGGATCGCGCACTGGGCCTGCCGCTC GAGCGCCCCAAGTCGCTCACCCCTGAGTTCCTCTGGGAGTTTGCCACCAA GAAGTGAGAGAGGGAGGGAGTCGAGAGGATTGCCGTTCCTACATTTCTTT CTTCGGGGTCGGCAGCTGGCGGTGGCGGCTAATGGTAGCGGCTGACGGCG GCGTATGGCGGCGGCAGCCGCCGGCTGCTGGCGTCGCCTGTGGCGGTCGC AACGGTGGAAGACGGTGGTCGCGGAAGATGGTCACTGGAGACGGCGGCAG GAGTCGGCAGCGGCGGAGACGGCCACGGAAGGCGGCGGCGATGGTGGGGG ATGGCGGGCGGTGCAGTGGTGCCGGTGGCAACCGCTGCGGCGTCGCGGCC GCAGCTGCTGCTGCAAAAGACCGCAGCAGGTGCCGCGACAGCGCGCGGCT GGAGCGCCCGCGCCGGCAGGAAGCAGCGACATTGGTAATGTCGCATGCAA TTGGCTATAGGCAACGCGCGAAAGGCGGCAGCGGAAGCAGGTGCAACCAG CGGCGACAGCGGCGGCAGCAGCAATACCACTTGTGCGCGGCGACGGCTTC GGCTGAGGTTGGGGCGGCGACGTCGGGTATGGGGCATCGTCGTTGTTACT ACTGCCGCCGCTGCCGCCGCCGGTTCAGCCGCGGTGGAAGGAACGCGAGT CGTGTAGCATGTAGGCGGGCCGTTGCGTACCGGAAAGTTTTGGGCGCGCA CTCCGTTTCGGTTTTGTTGCCCTGTGCCGCCATTTTAGCAAGGGGGGCTG CTTGCCTCGGCCCATTTTTCGAGCGAGCCCCCCTTCTGGCCGCAACGCAC GTGCAATAGTTGCGGATATAGTTGTGCTAGGGTTGACGGCAAAAGGGACG GCCCTGCCTGAGCAACAATGGCGGGCCAATGAAGGGTGGACATCCTTGAG TACTAGTAGCATATGTGCTGTTGTGGAAATATGGGCGCTGCTGGCGACGC TCTGACATCGTAACCGTCGTGTCAACATATTGCCGGCGAGACCGGGAAGC CCGCTCTGTTCGTCTTTGTATCCGTTCCGACCTCTCATACGCCGTCGTTT TTGTAAGAGATCCTAATATGGGTTGTCCAATGTAGGGAGCAGTAATGCAA TGTAAAGGCCGCCTGAATAGTCGCCGCCTATAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1719:3110..6342-

>mRNA_P-wetherbeei_contig1719.4.2 ID=mRNA_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:3110..6342- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGACGGCGGCGGCGGCGGTGATCGCATGGACTAATTATGATTATGA
TGGCGGCGATGACTGCGGTGGCAACGATGGCTGCGGCGACGGCTTGGCGG
CGGCTCGGCGGCGACTCGACGGCGCATGGCGGCGGCGCGTGAAACGGCGT
CGGCGACGGAATCGGGCTGACTTTCAACCAACCCCGGTACGAATTAATTC
CGGGACCGGATCTGCCGGATATTTGACCAATTGGGCAATCGATCAGATGC
CCGAGGTGGCGGCGCTGATCTACCGCTGCAAGTTCAAGGATGGCAAGCTC
TCCAAGGACGCCTCCTCCGACTACTCGGGCAACTTCTGCGCAATGCTCGG
CTACGACGATCCGGCCTTCGCCGAGCTGATGCGCATCTACCTCGTCATTC
ACTCGGACCACGAGGGCGGCAACGCATCGGCGCACGCGACGCACCTGGTT
GGATCGACGCTGTCCGACCCGTATTTGAGCTACGCGGCGGGGCTCAACGC
GCTGGCTGGTCCACTGCACGGGCTGGCCAACCAGGAGGTCCTCGGCTGGA
TCAAGGACTTGCAGGCGCAGTTCAAGGCGAAGGGCAAGGAGGTCAACAAG
CAGACCATCGAAGAGTTCGCCTGGGAGACCCTCAACTCCGGCAAGGTGAT
CCCGGGATACGGGCACGCGGTGCTGCGCAAGACAGACCCACGCTACACTG
CGCAGCGCGAGTTTGCGCTGAAGCACCTCCCGGACGACGAGCTCTTCAAG
ATCGTCTCCACCATCTACGAGGTCGTGCCCGGCGTCCTCACCAAGCTCGG
CAAGGTCAAGAACCCGTGGCCGAACGTGGACGCCCATTCGGGCGCGCTGC
TCTGCCATTACAACTTCATGGAGAACGACTACTACACGGTGCTCTTCGGC
GTCAGCCGCGGCATCGGCGCCCTCTCGCAGCTCTTCTGGGATCGCGCACT
GGGCCTGCCGCTCGAGCGCCCCAAGTCGCTCACCCCTGAGTTCCTCTGGG
AGTTTGCCACCAAGAAGTGA
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