mRNA_P-wetherbeei_contig1714.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1714.2.1
Unique NamemRNA_P-wetherbeei_contig1714.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.920e-51
Identity = 103/146 (70.55%), Postives = 117/146 (80.14%), Query Frame = 1
Query:    7 TPPAERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL 444
            +P  ERR +SVVVVDPFSSGA+LA+RAVAEG+HCIRV SE+DSPVAKLVQEGM L+FDATFQ+DDR  D   AIA L+  L ALPW V AVLAGAE GV +ADILSNR+   + TNGE LS ARRNKY MGE VR+   RAVQQR+
Sbjct:  125 SPVQERRNQSVVVVDPFSSGAILARRAVAEGFHCIRVLSEVDSPVAKLVQEGMVLEFDATFQYDDRGVDSETAIARLVSSLKALPWAVVAVLAGAEPGVEIADILSNRLS--LDTNGEELSLARRNKYEMGERVRSCGPRAVQQRM 268          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 6.210e-50
Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = 1
Query:   22 RRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL 444
            R A++VVVVDPFSSGALLA+R +AEGY C+RVFS +DSPVAKLVQEG  L+FDATFQ DDR+PDP  +IA+LLG LS LPW +AAV+ GAETGV LADILS+R+G  + +NGE LS  RRNK++M E VR+ +VRAV+Q L
Sbjct:  144 RDAKAVVVVDPFSSGALLAKRVIAEGYRCVRVFSVMDSPVAKLVQEGTVLEFDATFQLDDRSPDPEASIAELLGELSLLPWGIAAVMPGAETGVELADILSSRLG--LASNGEELSLCRRNKHLMAEQVRSHEVRAVRQML 282          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.820e-34
Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 1
Query:    4 ATPPAERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADIL--SNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQ 438
            A+ P  ++ E+V VVDPFS+GAL+A+R  +EG+H +RV SE +SPVA LVQE +S  ++AT Q ++ A D   A+A+ +  L ALPWPV  VL GAETGVALAD+L  S  + G    NG   + ARRNKY+MGE +R A +RAV+Q
Sbjct:  127 ASDPKPKKEEAVCVVDPFSTGALIAERLESEGFHVVRVLSEYNSPVADLVQESISCSYEATIQHNNLAEDQDAALAETVAALRALPWPVVGVLPGAETGVALADLLVFSMELRG----NGPEHTRARRNKYLMGEAIRQAGIRAVKQ 269          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A7R9YE89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE89_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.980e-32
Identity = 76/139 (54.68%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   22 RRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQ 438
            R    V VVDPFS+GALLA      G+H IR+ SE +SPVA LVQE +S  FDAT Q ++ A D   A+ D +  L ALPW + A+L GAETGV+LAD L+  +   +  NGE  S ARRNKY+MGE VRAA VRAV+Q
Sbjct:  127 REERMVAVVDPFSTGALLAAAVEQRGFHVIRILSEYNSPVADLVQESISCSFDATIQHNNLAADQQKALQDTIAELKALPWALEAILPGAETGVSLADQLTFALE--LRGNGEEHSRARRNKYLMGEAVRAAGVRAVKQ 263          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A7S3HD13_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD13_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.500e-31
Identity = 76/140 (54.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query:   19 ERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQ 438
            E + E +++VDPFS+GA LA     +GY C RVFS  DSPVA LVQ+G+ +DF AT QF+DR  + G A+ + L  +  LP+PV A+L GAETGV LAD L+   G  + TNG   S ARRNKY MGE+VR A VRAV Q
Sbjct:   86 ELKDEIIIIVDPFSTGAHLAAEVCKQGYRCARVFSVWDSPVATLVQKGLKIDFCATLQFNDRV-EHGIALEECLNSIKELPYPVRAILPGAETGVELADQLA--FGMKLRTNGLEKSLARRNKYHMGESVRNAGVRAVTQ 222          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.910e-25
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1
Query:   37 VVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQ 438
            VVVVDPFS+GA LA   VA GY  + V +E DSPVA+LV          T Q D+   D   A+   + +L A+  PV AVL GAETGV LAD L+ R+G     NG  LS  RRNKY MGETVRA+ VRAV+Q
Sbjct:  147 VVVVDPFSTGAQLAAEVVARGYRLVMVLAEKDSPVAELVVGDNEFGDAPTVQHDNTVEDQDAALEQTVAQLMAMDDPVVAVLPGAETGVLLADRLAVRLG--TRNNGMELSLHRRNKYFMGETVRASGVRAVKQ 278          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A812Y190_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y190_SYMMI)

HSP 1 Score: 105 bits (263), Expect = 4.680e-24
Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 1
Query:   10 PPAERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFS-ELD--SPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL 444
            PP  +  E+VV+VDPFS+GA LA    A GY  I V+S ELD  + +  L+ +G++L+F+A   F+         I  +  ++ A  +PV A++AGAETGV LAD LS+ +G  + +NG   S ARRNK+VMGETVR A VRAV+Q++
Sbjct:    7 PPVPKPVEAVVIVDPFSTGASLAAHCYAMGYKIIAVYSAELDKLANLTNLIPQGLTLEFEAIIGFEAD-------IGGMATKVRACGFPVMAIMAGAETGVELADALSSNMG--LRSNGTAQSEARRNKFVMGETVRRAGVRAVKQKV 145          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A482SXB2_9ARCH (ATP-grasp domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXB2_9ARCH)

HSP 1 Score: 102 bits (255), Expect = 1.180e-22
Identity = 64/137 (46.72%), Postives = 87/137 (63.50%), Query Frame = 1
Query:   34 SVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL 444
            +VVVVDPFS+GA +A   +  GY  I +FSE DSPVAKLV +G  +      Q D+R P+   AI + L  L A   P+ A+L GAETGV LA++L++R G     N   ++ + RNK+VM ET+R A VRA+ Q+L
Sbjct:  380 AVVVVDPFSTGANIAATVLKWGYKLILIFSEKDSPVAKLVAKGAHVKPTLLIQHDNRNPNQDAAIQETLLALEAENSPILAILPGAETGVELAEVLASRYG--TRHNTPDMTESHRNKFVMQETIRRAGVRAIHQQL 514          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A7S0XE07_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE07_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.840e-22
Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = 1
Query:   34 SVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL 444
            +VVVVDPFS+GA +A   +  GY  I VFSEL+SPVAKLV +  S       Q D+  PD   AI+  L  +      V A+L GAETGV LAD L+ R G     NGE ++ ARRNK++M E +R A VR++ Q+L
Sbjct:  530 AVVVVDPFSTGANIAATIIKMGYRLILVFSELNSPVAKLVSKSSSYQPTLLIQHDNTNPDQQQAISHTLDAIHKAGSCVLAILPGAETGVELADKLAARYG--TRNNGEEMTEARRNKFLMQEAIRKAGVRSISQKL 664          
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Match: A0A485KLN0_9STRA (Aste57867_8844 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLN0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.600e-21
Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 1
Query:   10 PPAERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKLVQEGMSLDFDATFQ---FDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETGVALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQ 438
            P  E + E V VVDPFS+G  LAQ  +A GY CI V+SE +   A  +   +S D  A+F    F D A D    +  ++G + A  + V  V+ GAE GV L D LS R+   VVTNG   S  RRNKYVMGET+RAA +RAV+Q
Sbjct:   22 PNVEMKKECVAVVDPFSTGLCLAQDVMARGYACIAVYSETEQVFADWMAT-LSGDVRASFAGEVFHDGADDSEEEMDRIVGEVLAFGYHVVGVIVGAEPGVKLCDRLSERMH--VVTNGSAGSEGRRNKYVMGETIRAAGMRAVKQ 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1714.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z961_9STRA1.920e-5170.55ATP-grasp domain-containing protein n=1 Tax=Tribon... [more]
D7FXU1_ECTSI6.210e-5068.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XUT4_9STRA4.820e-3452.38Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YE89_9STRA2.980e-3254.68Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3HD13_9STRA4.500e-3154.29Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1U8K3_9STRA6.910e-2552.24Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A812Y190_SYMMI4.680e-2445.95DdaF protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A482SXB2_9ARCH1.180e-2246.72ATP-grasp domain-containing protein n=1 Tax=archae... [more]
A0A7S0XE07_9STRA1.840e-2247.45Hypothetical protein n=2 Tax=Chromulina nebulosa T... [more]
A0A485KLN0_9STRA1.600e-2146.58Aste57867_8844 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1714contigP-wetherbeei_contig1714:2598..3475 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXU1
PFAMsATP-grasp_4
Model size444
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.02e-50
EggNOG OGsCOG0439@1|root,2QUGS@2759|Eukaryota
DescriptionATP-grasp domain
Cds size444
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186109.2401292-CDS-P-wetherbeei_contig1714:2597..28821683186109.2401292-CDS-P-wetherbeei_contig1714:2597..2882Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1714 2598..2882 -
1683186109.2508821-CDS-P-wetherbeei_contig1714:3316..34751683186109.2508821-CDS-P-wetherbeei_contig1714:3316..3475Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1714 3317..3475 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1714.2.1prot_P-wetherbeei_contig1714.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1714 2598..3475 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1714.2.1

>prot_P-wetherbeei_contig1714.2.1 ID=prot_P-wetherbeei_contig1714.2.1|Name=mRNA_P-wetherbeei_contig1714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
GATPPAERRAESVVVVDPFSSGALLAQRAVAEGYHCIRVFSELDSPVAKL
VQEGMSLDFDATFQFDDRAPDPGPAIADLLGRLSALPWPVAAVLAGAETG
VALADILSNRIGGGVVTNGEVLSAARRNKYVMGETVRAADVRAVQQRL
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mRNA from alignment at P-wetherbeei_contig1714:2598..3475-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1714.2.1 ID=mRNA_P-wetherbeei_contig1714.2.1|Name=mRNA_P-wetherbeei_contig1714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=878bp|location=Sequence derived from alignment at P-wetherbeei_contig1714:2598..3475- (Phaeothamnion wetherbeei SAG_119_79)
GGCGCAACGCCACCCGCGGAGCGCCGCGCGGAGTCGGTGGTAGTGGTGGA TCCGTTCTCGTCGGGGGCGCTGCTGGCGCAGCGGGCCGTGGCCGAGGGCT ACCACTGCATTCGCGTCTTCAGCGAGCTTGACTCGCCCGTCGCCAAGCTC GTGCAGGAGGTCAGTCAATTTTTTCCATGGCGGGCTAAGTGAGCGGGCGG GGAAATAAGAAACAAATTTTGCGGGCTGCATGCGTTTTTGCTGTTGATTG CCCTCTTGGCATCTCTTGGCCCGTTTTGTGGGGAGGAGCGCGAGTGAGGC AGAGCAGGTCAGATGTAGGGCCTCAAAAGTCCTAATAGTACATCTCTACT ATTGCATCCATATGATCGTGAGAATTCCTTTTCCTTGCCTAAATCTGTCT TTCAGCAACGTGCTCTCTGTTCAGGTAAAGTCTAAGGTTTGCTTGGGAGT CCTTGCCAGCTTTCTTGCCTTGTCTTCGCGAAGAATATCCTTTCAAGTCG TCCATGCTCTTCTATCAGCCTGTGGTCTCCGCATGTCCCCAAAAAATCTC CGCTTCGCACGTTTCCTTTCCCTCATCCCTTTTCTCGTTGCAGGGCATGT CGTTGGACTTTGATGCGACCTTTCAGTTCGACGACCGTGCGCCGGACCCG GGGCCGGCCATCGCGGACCTCCTCGGACGACTCTCAGCCCTGCCCTGGCC CGTGGCGGCCGTCCTGGCGGGGGCCGAGACGGGCGTGGCGCTGGCGGACA TTCTCTCCAACCGCATCGGCGGCGGTGTGGTCACCAACGGCGAGGTGCTG TCGGCGGCGCGGCGGAACAAGTACGTCATGGGGGAGACGGTGCGCGCAGC GGATGTGCGGGCGGTGCAGCAGCGTCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1714:2598..3475-

>mRNA_P-wetherbeei_contig1714.2.1 ID=mRNA_P-wetherbeei_contig1714.2.1|Name=mRNA_P-wetherbeei_contig1714.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1714:2598..3475- (Phaeothamnion wetherbeei SAG_119_79)
GGCGCAACGCCACCCGCGGAGCGCCGCGCGGAGTCGGTGGTAGTGGTGGA
TCCGTTCTCGTCGGGGGCGCTGCTGGCGCAGCGGGCCGTGGCCGAGGGCT
ACCACTGCATTCGCGTCTTCAGCGAGCTTGACTCGCCCGTCGCCAAGCTC
GTGCAGGAGGGCATGTCGTTGGACTTTGATGCGACCTTTCAGTTCGACGA
CCGTGCGCCGGACCCGGGGCCGGCCATCGCGGACCTCCTCGGACGACTCT
CAGCCCTGCCCTGGCCCGTGGCGGCCGTCCTGGCGGGGGCCGAGACGGGC
GTGGCGCTGGCGGACATTCTCTCCAACCGCATCGGCGGCGGTGTGGTCAC
CAACGGCGAGGTGCTGTCGGCGGCGCGGCGGAACAAGTACGTCATGGGGG
AGACGGTGCGCGCAGCGGATGTGCGGGCGGTGCAGCAGCGTCTG
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