mRNA_P-wetherbeei_contig17134.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A1J5QD70_9ZZZZ (TPR repeat-containing protein YrrB n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5QD70_9ZZZZ) HSP 1 Score: 107 bits (266), Expect = 6.890e-23 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 10 GRNDPCPCGSGKKSKKCCSQKLGL--------------SPADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
GRNDPCPCGSGKK KKCC ++ + A+IN + L+ AG + EL A+ L HP G WK+L A G+DA+AA Q+AAQLLPDD E NLGVAL+A + +A
Sbjct: 6 GRNDPCPCGSGKKYKKCCQDRIDARQSAPGIAAQDPAPTSAEINLLVALFNAGRHAELESLARELLERHPDSGFVWKVLSSALQAMGKDALAAAQRAAQLLPDDAEQQYNLGVALQALGQLEKA 129
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A7Y4YR63_9PROT (Tetratricopeptide repeat protein n=1 Tax=Gallionella sp. TaxID=2052161 RepID=A0A7Y4YR63_9PROT) HSP 1 Score: 106 bits (265), Expect = 7.950e-23 Identity = 56/116 (48.28%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQKLGLSP---AD-INQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSE 336
M RN PCPCGSGKK K CC +K+ SP AD INQ + LY+AG Y EL RA L +P G W++LG A + +DA+ AFQK A+L+P++ + + NLGVAL++A R+ +
Sbjct: 1 MKPERNAPCPCGSGKKFKHCCERKVVTSPTPTADVINQHIALYSAGRYAELESRAHTLVEQYPDFGFGWQLLGGALQMQNKDALPAFQKMAELMPNEADAHYNLGVALKSAGRYED 116
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A1J5T4U0_9ZZZZ (Protein O-GlcNAc transferase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5T4U0_9ZZZZ) HSP 1 Score: 105 bits (263), Expect = 1.750e-22 Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 10 GRNDPCPCGSGKKSKKCCSQKL-------GLSP-------ADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
GRNDPCPCGSGKK KKCC KL ++P A++NQ + LY G Y EL +A+ L + G AWK+LG + V G++A+ A KA + LP+D E+YNNLG AL +F +A
Sbjct: 33 GRNDPCPCGSGKKFKKCCHDKLEGHLDLSSIAPKKAIPSLAEMNQIVALYNEGHYVELESQARLLVEQYANSGFAWKVLGTSLWVQGKEALPALYKATEFLPNDAEVYNNLGNALRDLGQFDKA 156
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A6L9KVF1_9PROT (Tetratricopeptide repeat protein n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9KVF1_9PROT) HSP 1 Score: 102 bits (254), Expect = 2.830e-21 Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQKLGL--------------SPADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
M GRND CPCGSGKK KKCC KL SP +INQ + L+ +G Y E+ A+ L +P G WK LG A + G+D++ A QKA +L+PDD E + NLG AL+ + +A
Sbjct: 1 MNPGRNDSCPCGSGKKYKKCCQHKLAAHIATQTTQPKVSVPSPTEINQFVHLFNSGRYTEMENLARELLERYPGSGFVWKALGAALGMQGKDSLLALQKATELMPDDAEAHYNLGNALKDLGQLDDA 127
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A7Y4YS49_9PROT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Gallionella sp. TaxID=2052161 RepID=A0A7Y4YS49_9PROT) HSP 1 Score: 95.5 bits (236), Expect = 5.440e-20 Identity = 50/118 (42.37%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQKLG---LSPADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEATE 345
M RN+PCPCGSGKK K CC K L+ A++NQ L G + + RA L +P E WK+L IA + G+ +AAF++AA LLP D + NLG AL+ R EA +
Sbjct: 1 MNPSRNEPCPCGSGKKYKHCCEGKQSVAKLAAAELNQLGMLVNTGQFAVVETRASDLLQQYPDEAGLWKLLAIALQMQGKSGLAAFERAALLLPSDAGAHMNLGNALQGVGRLEEAVQ 118
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A7Y4YR72_9PROT (Protein O-GlcNAc transferase n=1 Tax=Gallionella sp. TaxID=2052161 RepID=A0A7Y4YR72_9PROT) HSP 1 Score: 97.8 bits (242), Expect = 1.090e-19 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQK-----LGLSP--ADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
M RNDPCPCGSGKK K CC +K + +P +++N L+ +G Y + AK L HP E AWK+L I+ + G +A+ AFQK A+LLP D + NLG AL+AA + +A
Sbjct: 1 MKPSRNDPCPCGSGKKYKHCCERKEEVRAVNSTPTVSELNTLQALFNSGQYAAVETSAKALLDRHPNEPAAWKLLAISLQMQGGNALPAFQKTAELLPADAGAHMNLGNALQAAGQLEKA 120
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: UPI001AD30902 (TPR repeat-containing protein YrrB n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=UPI001AD30902) HSP 1 Score: 96.3 bits (238), Expect = 3.050e-19 Identity = 52/127 (40.94%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQKLGLSP--------------ADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
M GRNDPCPCGSGKK KKCC + P A+ NQ + L+ AG EL + + L P G AWK LG A + G+D++ A QKA + LP+D E + NLG L ++ EA
Sbjct: 1 MKPGRNDPCPCGSGKKYKKCCQETSEFIPPAPKHSRKSAVPTAAECNQLVALFNAGHLAELETQTRLLLDRCPDSGFAWKALGAALQIQGKDSLFALQKATEFLPNDAEAHYNLGNTLHEMRQLDEA 127
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A534HS98_9GAMM (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534HS98_9GAMM) HSP 1 Score: 96.3 bits (238), Expect = 3.280e-19 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCS-QKLGLSPA------DINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFS 333
M GRNDPCPCGSG+K K+CC Q + SP +I + L G E RA+GL HP G WK L +A G++A+ A +K +L+P DPE ++NLG AL A ++S
Sbjct: 1 MKPGRNDPCPCGSGQKYKRCCGLQPVTASPPAVPGEHEIGALVALINQGRLSEAEHRARGLLKIHPDSGMLWKTLSVALMRQGKEALQALRKTVELMPQDPEAHSNLGTALRARGQWS 118
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A534F8Q3_9GAMM (Tetratricopeptide repeat protein n=5 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534F8Q3_9GAMM) HSP 1 Score: 96.3 bits (238), Expect = 3.650e-19 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCS-QKLGLSPA------DINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFS 333
M GRNDPCPCGSG+K K+CC Q + SP +I + L G E RA+GL HP G WK L +A G++A+ A +K +L+P DPE ++NLG AL A ++S
Sbjct: 1 MKPGRNDPCPCGSGQKYKRCCGLQPVTASPPAVPGEHEIGALVALINQGRLSEAEHRARGLLKIHPDSGMLWKTLSVALMRQGKEALQALRKTVELMPQDPEAHSNLGTALRAQGQWS 118
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Match: A0A6L9L1B7_9PROT (Tetratricopeptide repeat protein n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9L1B7_9PROT) HSP 1 Score: 95.1 bits (235), Expect = 9.260e-19 Identity = 52/127 (40.94%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 1 MAIGRNDPCPCGSGKKSKKCCSQKLGL--------------SPADINQALDLYTAGSYGELLERAKGLTLNHPQEGQAWKILGIASHVNGQDAIAAFQKAAQLLPDDPEIYNNLGVALEAAQRFSEA 339
M GRNDPCPCGSGKK KKCC KL S +IN+ L+ +G Y EL +A+ L +P G WK LG + + A+ Q+A +LLPDD E + NLG AL+ R +A
Sbjct: 1 MNTGRNDPCPCGSGKKYKKCCQNKLAAHIATQTTQPKVSEPSSTEINRLALLFNSGRYTELENQARELLEQYPGSGFVWKALGASLKAQRKVALFELQRATELLPDDAEAHGNLGNALKDLGRLDDA 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17134.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17134.2.1 >prot_P-wetherbeei_contig17134.2.1 ID=prot_P-wetherbeei_contig17134.2.1|Name=mRNA_P-wetherbeei_contig17134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp MAIGRNDPCPCGSGKKSKKCCSQKLGLSPADINQALDLYTAGSYGELLERback to top mRNA from alignment at P-wetherbeei_contig17134:588..1295+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17134.2.1 ID=mRNA_P-wetherbeei_contig17134.2.1|Name=mRNA_P-wetherbeei_contig17134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig17134:588..1295+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17134:588..1295+ >mRNA_P-wetherbeei_contig17134.2.1 ID=mRNA_P-wetherbeei_contig17134.2.1|Name=mRNA_P-wetherbeei_contig17134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig17134:588..1295+ (Phaeothamnion wetherbeei SAG_119_79)back to top |