prot_P-wetherbeei_contig17127.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17127.1.1
Unique Nameprot_P-wetherbeei_contig17127.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length145
Homology
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.800e-39
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    2 SSSDSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            S +DS+DD CPLCCEELDLSDKNFLPC CGYRVC+WCWH IK+ +N LCPACR PYSDDPHAF+AVDRD+++K
Sbjct:    5 SDNDSEDDVCPLCCEELDLSDKNFLPCQCGYRVCIWCWHTIKDHMNGLCPACRNPYSDDPHAFAAVDRDDVIK 77          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.110e-38
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    5 DSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            DSDDD CPLCCEELD+SDKNF+PC CGY+VCMWCWHHIK DLN LCPACRTPYSDDPHAFSAVDR E++K
Sbjct:    3 DSDDDVCPLCCEELDISDKNFMPCRCGYQVCMWCWHHIKNDLNGLCPACRTPYSDDPHAFSAVDRQEVLK 72          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A482RU21_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU21_9ARCH)

HSP 1 Score: 130 bits (328), Expect = 3.490e-37
Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    3 SSDSDDDQ----CPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDE 71
            S++SDDD     CPLC EE+D SDKNFLPCPCGY+VCMWCWHHI+E+LN LCPACRTPYS DPHAF+AVDR E
Sbjct:    2 SNESDDDADSLYCPLCVEEIDQSDKNFLPCPCGYQVCMWCWHHIRENLNGLCPACRTPYSADPHAFAAVDRTE 74          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A8J2SPL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPL8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.170e-37
Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    4 SDSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            SDSD+  CPLCCEELD+SD+NFLPC CGY+VCMWCWHHIKE+LNNLCPACR PY D+PHAFSAV+++EI++
Sbjct:    2 SDSDEQVCPLCCEELDISDQNFLPCKCGYQVCMWCWHHIKENLNNLCPACRNPYHDNPHAFSAVEKEEIMR 72          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 140 bits (354), Expect = 1.600e-36
Identity = 55/68 (80.88%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    7 DDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            +DD CPLCCEELDLSDKNF+PCPCGYRVCMWCWHHIKE+LN LCPACR+PY+DDPHAF+AV  +E+V+
Sbjct:   19 EDDNCPLCCEELDLSDKNFVPCPCGYRVCMWCWHHIKENLNGLCPACRSPYADDPHAFAAVATEEVVE 86          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A7S2R121_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R121_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.410e-34
Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    7 DDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            D+D CPLCCEELD+SD  F PC CGY+VCMWCWH IKE    LCPACRTPY DDPH FSAVD +E+VK
Sbjct:    3 DNDVCPLCCEELDISDLQFFPCKCGYQVCMWCWHRIKESECGLCPACRTPYGDDPHEFSAVDMEEVVK 70          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: D7FLE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE0_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 3.880e-34
Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    3 SSDSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            S D DD  CPLCCE +DLSDKNF+PCPCGYRVCMWCWH IKE+   LCPACR+ Y+DDPHAF+AVD++E++K
Sbjct:   10 SDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIK 81          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A6H5JC61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC61_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.610e-33
Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    3 SSDSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            S D DD  CPLCCE +DLSDKNF+PCPCGYRVCMWCWH IKE+   LCPACR+ Y+DDPHAF+AVD++E++K
Sbjct:   10 SDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIK 81          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A7S3NFX2_9STRA (Hypothetical protein n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFX2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.780e-33
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    5 DSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            D DD  CPLCCEELDLSD+NFLPC CGY+VCM+CW+ IKE+ N LCPACRTPY+DDPHAF+AVDR+E++K
Sbjct:    8 DDDDLTCPLCCEELDLSDQNFLPCKCGYQVCMFCWYRIKENSNGLCPACRTPYADDPHAFAAVDRNEVIK 77          
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Match: A0A7S2HMP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMP0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.650e-33
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 0
Query:   11 CPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLCPACRTPYSDDPHAFSAVDRDEIVK 74
            CPLCCE+L   DKNF+PCPCGY+VC+WCWHHIK+DLN LCPACR PYSDDPHA+ AVDR+ +++
Sbjct:    7 CPLCCEDLLAQDKNFIPCPCGYQVCIWCWHHIKDDLNGLCPACRKPYSDDPHAYKAVDRETVLE 70          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17127.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKN6_9STRA1.800e-3978.08RING/Ubox like zinc-binding domain-containing prot... [more]
A0A7S2GN38_9STRA2.110e-3885.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482RU21_9ARCH3.490e-3776.71RING-type domain-containing protein n=1 Tax=archae... [more]
A0A8J2SPL8_9STRA5.170e-3777.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4D5P1_HETAK1.600e-3680.88Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2R121_9STRA3.410e-3473.53Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
D7FLE0_ECTSI3.880e-3472.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC61_9PHAE4.610e-3372.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3NFX2_9STRA4.780e-3375.71Hypothetical protein n=4 Tax=Aureoumbra lagunensis... [more]
A0A7S2HMP0_9STRA9.650e-3373.44Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..104
NoneNo IPR availablePFAMPF14570zf-RING_4coord: 11..58
e-value: 5.8E-22
score: 77.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..130
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 4..106
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..66
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..92
e-value: 2.5E-26
score: 92.8
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 4..106
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 11..54
score: 9.759973
IPR039515NOT4, modified RING finger, HC subclass (C4C4-type)CDDcd16618mRING-HC-C4C4_CNOT4coord: 11..55
e-value: 6.27473E-22
score: 80.3512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17127contigP-wetherbeei_contig17127:1018..1452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17127.1.1mRNA_P-wetherbeei_contig17127.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17127 347..1452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17127.1.1 ID=prot_P-wetherbeei_contig17127.1.1|Name=mRNA_P-wetherbeei_contig17127.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
MSSSDSDDDQCPLCCEELDLSDKNFLPCPCGYRVCMWCWHHIKEDLNNLC
PACRTPYSDDPHAFSAVDRDEIVKKEKKKKKEAKLQAQQQQAAAARQAAQ
ARQQLAVAAAATPATQQPSLPPPPPGLLGSPAQASPGGAPTAVAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR039780Mot2
IPR001841Znf_RING
IPR039515NOT4_mRING-HC-C4C4