prot_P-wetherbeei_contig1712.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1712.5.1
Unique Nameprot_P-wetherbeei_contig1712.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length186
Homology
BLAST of mRNA_P-wetherbeei_contig1712.5.1 vs. uniprot
Match: A0A835YRG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.020e-34
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 0
Query:    1 MGLHSLLITNTQGMLLLARYFDDPNDARGSVGGGGAFSQRLPISAGEGMIRDRAAAMRLWEREVLLQTRHMWDQAALDGAEHVARAKGDVFIVFRAIHGVLVFLCGFDEFDELTLAETLKSFVDVLAALCAESG-KHAKAFEPAILTGDVYGKVFIAIDEMMGGGILEATDQESVLCGSKLKPL 183
            M +HSLLI N +G LL+ RYFD+  +        GA      +++      DR   M+ WE EV  QTR MW  A    A  VAR   DV I++R I  +LVF CG D+ DELTL++ +     V+A LC +S  K A+  E  ++ GD Y KV +A+DEMM GGILEA D ++VL  +K++P+
Sbjct:    1 MVMHSLLILNERGHLLMGRYFDEVLEC-------GALQHLGDVAS------DREQCMQWWEDEVRQQTREMWQFAHT--ANQVARGADDVIIIYRRIGDLLVFACGRDDCDELTLSDVVDCLGGVIATLCEDSSAKGARPTESWLMIGDTYAKVALAVDEMMPGGILEALDPDAVLSMTKMRPI 169          
BLAST of mRNA_P-wetherbeei_contig1712.5.1 vs. uniprot
Match: I0YT04_COCSC (Coatomer subunit zeta n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YT04_COCSC)

HSP 1 Score: 50.1 bits (118), Expect = 6.240e-5
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   77 LDGAEHVARAKGDVFIVFRAIHGVLVFLCGFDEFDELTLAETLK----SFVDVLAALCAESGKHAKAFEPAILTGDVYGKVFIAIDEMMGGGILEATDQESVLCGSKLK 181
            +    HVARA+G+  +V+ A+        G  E+DELTLAETL+    +F DVL    +E          A+L  D Y +V I + E++  GILE TD+ ++L   K+K
Sbjct:    7 IQSGAHVARAEGE--LVYHAL--------GTGEYDELTLAETLRFIGTAFHDVLRKTPSE----------AVLL-DNYTRVCIILSEIINEGILEITDRATLLRALKIK 94          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1712.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YRG5_9STRA1.020e-3442.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I0YT04_COCSC6.240e-536.70Coatomer subunit zeta n=1 Tax=Coccomyxa subellipso... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.60coord: 2..180
e-value: 1.3E-12
score: 49.8
NoneNo IPR availablePANTHERPTHR11043:SF1TSET COMPLEX MEMBER TSTDcoord: 55..182
IPR039652Coatomer subunit zetaPANTHERPTHR11043ZETA-COAT PROTEINcoord: 55..182
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 4..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1712contigP-wetherbeei_contig1712:3774..4331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1712.5.1mRNA_P-wetherbeei_contig1712.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1712 3521..4507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1712.5.1 ID=prot_P-wetherbeei_contig1712.5.1|Name=mRNA_P-wetherbeei_contig1712.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp
MGLHSLLITNTQGMLLLARYFDDPNDARGSVGGGGAFSQRLPISAGEGMI
RDRAAAMRLWEREVLLQTRHMWDQAALDGAEHVARAKGDVFIVFRAIHGV
LVFLCGFDEFDELTLAETLKSFVDVLAALCAESGKHAKAFEPAILTGDVY
GKVFIAIDEMMGGGILEATDQESVLCGSKLKPLVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039652Coatomer_zeta
IPR011012Longin-like_dom_sf