mRNA_P-wetherbeei_contig17113.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17113.1.1
Unique NamemRNA_P-wetherbeei_contig17113.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: A0A7S3YC63_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC63_HETAK)

HSP 1 Score: 68.6 bits (166), Expect = 1.400e-12
Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 1
Query:    7 FHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLEILEV 162
            FHH+ ++T +I  A+KFYSLLG+ EK RF+TG AR  W+ G G +RLE++EV
Sbjct:   57 FHHYAIKTKNIFNALKFYSLLGMEEKVRFKTGAARAAWIEGVG-VRLELIEV 107          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: A0A7S4A6T2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6T2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 9.560e-11
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 1
Query:    1 ATFHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLEILEV 162
            A FHH  ++  DI R+MKFYSL GL E  RFR+G AR  WL G    RLE++EV
Sbjct:   26 APFHHAAIKCRDIERSMKFYSLFGLEEACRFRSGAARCAWLTGAA-TRLELIEV 78          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: D7FXV1_ECTSI (Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV1_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.110e-10
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 1
Query:    1 ATFHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLEILEV 162
            A  HH  +RT +I+RAMKFYSLLG+ E ARFR G AR  +L G G +RLE++EV
Sbjct:  131 AVSHHCALRTSNIVRAMKFYSLLGMNEAARFRAGNARCAFLEGAG-MRLELIEV 183          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: A0A1J0AE46_9CYAN (Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Gloeomargarita lithophora Alchichica-D10 TaxID=1188229 RepID=A0A1J0AE46_9CYAN)

HSP 1 Score: 50.1 bits (118), Expect = 3.840e-6
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 1
Query:    7 FHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLEILEV 162
            +HH  +RTG+I RA++FY+ LG +   RF  G     WL G G +RLE+++V
Sbjct:    7 YHHIAIRTGNIHRAIEFYTALGFQVSERFTAGITLACWLEGLG-MRLELMQV 57          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: UPI001FF69FA6 (VOC family protein n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF69FA6)

HSP 1 Score: 49.7 bits (117), Expect = 4.740e-6
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 1
Query:    7 FHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLEILEV 162
            +HH  +RTG+I RAM+FY++LG     RF  G     WL G G  RLE+++V
Sbjct:    7 YHHIAIRTGNIHRAMEFYTVLGFAVIERFTAGITLACWLEGLG-TRLELMQV 57          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: A0A2V3IEI1_9FLOR (Glucosamine 6-phosphate N-acetyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEI1_9FLOR)

HSP 1 Score: 49.7 bits (117), Expect = 1.620e-5
Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1
Query:   13 HHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPG-GIRLEILEV 162
            H  VRT DI RA +FYSLLG ++ +RFR    RG W+  P    R+E+LE+
Sbjct:  161 HIMVRTMDIARARRFYSLLGFQDTSRFRMNGVRGAWIESPYIEQRVELLEM 211          
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Match: R7QH14_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH14_CHOCR)

HSP 1 Score: 48.9 bits (115), Expect = 2.620e-5
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 1
Query:    4 TFHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPG-GIRLEILEV 162
            T  H  VRT DI RA +FYSLLG ++  RF T   + VW+  P    ++E++EV
Sbjct:   86 TLSHVMVRTWDISRARRFYSLLGFQDVTRFMTSGVKAVWIQSPYIDQKIELIEV 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17113.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A7S3YC63_HETAK1.400e-1255.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4A6T2_9STRA9.560e-1155.56Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
D7FXV1_ECTSI1.110e-1059.26Glyoxalase/bleomycin resistance protein/dioxygenas... [more]
A0A1J0AE46_9CYAN3.840e-644.23Glyoxalase/bleomycin resistance protein/dioxygenas... [more]
UPI001FF69FA64.740e-646.15VOC family protein n=1 Tax=Synechococcus sp. C9 Ta... [more]
A0A2V3IEI1_9FLOR1.620e-549.02Glucosamine 6-phosphate N-acetyltransferase n=1 Ta... [more]
R7QH14_CHOCR2.620e-544.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17113contigP-wetherbeei_contig17113:1207..1368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXV1
PFAMsAcetyltransf_10
Model size162
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.82e-11
EggNOG OGs2D0KU@1|root,2SEKQ@2759|Eukaryota
Ec32 ortholog descriptionGlyoxalase/bleomycin resistance protein/dioxygenase
Ec32 orthologEc-23_001400.1
Cds size162
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186108.366782-CDS-P-wetherbeei_contig17113:1206..13681683186108.366782-CDS-P-wetherbeei_contig17113:1206..1368Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17113 1207..1368 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17113.1.1prot_P-wetherbeei_contig17113.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17113 1207..1368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17113.1.1

>prot_P-wetherbeei_contig17113.1.1 ID=prot_P-wetherbeei_contig17113.1.1|Name=mRNA_P-wetherbeei_contig17113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp
ATFHHHCVRTGDILRAMKFYSLLGLREKARFRTGRARGVWLCGPGGIRLE
ILEV
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mRNA from alignment at P-wetherbeei_contig17113:1207..1368+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17113.1.1 ID=mRNA_P-wetherbeei_contig17113.1.1|Name=mRNA_P-wetherbeei_contig17113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig17113:1207..1368+ (Phaeothamnion wetherbeei SAG_119_79)
GCGACTTTCCACCACCACTGCGTCAGGACGGGCGACATTCTCCGCGCCAT GAAATTTTATTCGCTGCTCGGTCTCAGGGAGAAGGCCCGCTTCCGCACCG GACGCGCGCGCGGCGTGTGGCTGTGCGGGCCGGGAGGCATCCGGCTGGAA ATCTTGGAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17113:1207..1368+

>mRNA_P-wetherbeei_contig17113.1.1 ID=mRNA_P-wetherbeei_contig17113.1.1|Name=mRNA_P-wetherbeei_contig17113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig17113:1207..1368+ (Phaeothamnion wetherbeei SAG_119_79)
GCGACTTTCCACCACCACTGCGTCAGGACGGGCGACATTCTCCGCGCCAT
GAAATTTTATTCGCTGCTCGGTCTCAGGGAGAAGGCCCGCTTCCGCACCG
GACGCGCGCGCGGCGTGTGGCTGTGCGGGCCGGGAGGCATCCGGCTGGAA
ATCTTGGAGGTG
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