mRNA_P-wetherbeei_contig1711.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: A0A6H5L2J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J7_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.980e-31 Identity = 105/242 (43.39%), Postives = 135/242 (55.79%), Query Frame = 1
Query: 1 MLWADRREHYRGFWRDDMQEGWGEHVWLADRPPSHV-LDTHQQMCNVYRGEWHRGLRHGRGEFHYANGARYXXXXXXXXXXXXXXXXXEDGRVVEADFAEDKMTASPKAAGEKRDLATLNASVKLRIGDIIQGSSXXXXXXXXXXXXXXXXXXXXXXXTAAMHEVNRV--VLQVNSELRRCYKRYSLGA-NAAKDETVFTMTVAGFLSFAHDCGALAPRTALSEAEVYRMLRRMRRHHALQL 714
M W +RRE Y EHVW+ +RP S V +DT +QMCNVYRGEW G+RHG+G F YA+G+R+ XXXXXXXXXXXXXXXX +GR E F +D M G+ + L+A+VKL+I DI+ + EV R V V S+L+ YK Y+ A +D T+FTM++ F+ FA DC ALAP T ++ EVYRM RMRR H L+L
Sbjct: 166 MNWKERRERYTXXXXXXXXXXXXEHVWIEERPVSAVSMDTQKQMCNVYRGEWLDGMRHGQGTFMYADGSRHTXXXXXXXXXXXXXXXXXNGRTFEGLFDDDVMLGK---VGQDDEHPELSAAVKLKIADILSSGT----------------------------EVARAAAVRDVESDLKLLYKHYAKPEMTAPRDSTMFTMSMEQFVVFARDCRALAPCTRVTVGEVYRMFFRMRRQHTLEL 376
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: G0QM41_ICHMG (Radial spoke head protein, putative (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QM41_ICHMG) HSP 1 Score: 68.9 bits (167), Expect = 3.560e-9 Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 1 MLWADRREHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGAR 207
M W D E Y+G W+D++Q+G+GEH+WL + + VL N Y G+W +G R G G F+YANG++
Sbjct: 87 MHWIDCNEKYKGEWKDNIQDGYGEHIWLEPKGENKVLR------NRYEGQWQQGKREGLGVFYYANGSK 149
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: D7FIY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIY9_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 1.240e-8 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 1 MLWADRREHYRGFWRDDMQEGWGEHVWLADRPPSHV-LDTHQQMCNVYRGEWHRGLRHGRGEFHYANGARYXXXXXXXXXXXXXXXXXEDGRVVEADFAEDKM 306
M W +RRE Y +RP S V +DT +QMCNVYRGEW G+RHG+G F YA+G+R+ XXXXXXXXXXXXXXXX GR E F +D M
Sbjct: 166 MNWVERRERYTXXXXXXXXXXXXXXXXXXERPVSAVSMDTQKQMCNVYRGEWLDGMRHGQGTFMYADGSRHTXXXXXXXXXXXXXXXXXXGRTFEGLFDDDAM 268
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: G4ZK71_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZK71_PHYSP) HSP 1 Score: 67.0 bits (162), Expect = 1.560e-8 Identity = 34/62 (54.84%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D QEG+G HVWL + P S N Y GE+H GLRHGRG F YANGAR
Sbjct: 246 ERYDGEWLNDYQEGFGRHVWLVN-PLSVSATGSTSKNNWYEGEFHEGLRHGRGVFFYANGAR 306
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: A0A225WDW5_9STRA (Radial spoke head protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDW5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.560e-8 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMC--------NVYRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D Q+G+G HVWLA P + L T + N Y G++H+GLRHGRG F+YANGAR
Sbjct: 254 ERYDGEWENDYQQGFGRHVWLAT--PLNGLTTENESSASSSPHDKNWYEGDFHQGLRHGRGVFYYANGAR 321
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: D0NR05_PHYIT (Radial spoke head 10 family protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NR05_PHYIT) HSP 1 Score: 65.5 bits (158), Expect = 4.870e-8 Identity = 75/192 (39.06%), Postives = 89/192 (46.35%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGARYXXXXXXXXXXXXXXXXXEDGRVVEADFAEDKMTASPKAAGEKRDLATLNASVKLRIGDIIQGSSXXXXXXXXXXXXXXXXXXXXXXXTAAMHEVNRVVLQVNSELRRCYK------RYSL--GANAAKD 573
E Y G W +D QEG+G HVWL + P S + N Y GE+H GLRHGRG F YANGAR XXXXXXXXXXXXXXXXX RV F +D+ A L+T V + S A V L++N+ELR Y+ R SL G+N A D
Sbjct: 237 ERYDGEWENDCQEGFGRHVWLVN-PLSGSSNK-----NWYEGEFHEGLRHGRGVFFYANGARXXXXXXXXXXXXXXXXXXXXXRVFVGLFRQDRSVEGSYATAATAGLST---PVPVESSTATSPSQPPNSAGIMLYINDLLPITDVPRREKARKAVEHAALRINTELRALYRECIKQSRRSLAPGSNDADD 419
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: H3H5Y0_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5Y0_PHYRM) HSP 1 Score: 62.4 bits (150), Expect = 4.680e-7 Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLAD-----------RPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D Q G+G HVWL R S + H + N Y GE+H GLRHGRG F YANGAR
Sbjct: 118 ERYDGEWVNDCQHGFGRHVWLVSPLSSLSTVSPTRMRSSISSPHDK--NWYEGEFHEGLRHGRGVFFYANGAR 188
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: A0A6A3INH5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3INH5_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 6.670e-7 Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLAD-----------RPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D Q+G+G HVWL + P S +++H + N Y GE+H GLRHGRG F YANGAR
Sbjct: 260 ERYDGEWMNDCQKGFGRHVWLVNPLSAGSTSRNGAPVS--INSHDK--NWYEGEFHEGLRHGRGVFFYANGAR 328
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: A0A329SFI2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFI2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 6.700e-7 Identity = 32/71 (45.07%), Postives = 39/71 (54.93%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMCNV---------YRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D Q+G+G HVWL + T + +V Y GE+H GLRHGRG F YANGAR
Sbjct: 269 ERYDGEWENDCQQGFGRHVWLISPLNTSAGSTSKNGFSVSSNPHDKNWYEGEFHEGLRHGRGVFFYANGAR 339
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Match: W2QL63_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QL63_PHYPN) HSP 1 Score: 61.6 bits (148), Expect = 8.870e-7 Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 1
Query: 22 EHYRGFWRDDMQEGWGEHVWLAD-------RPPSHVLDTHQQMCNVYRGEWHRGLRHGRGEFHYANGAR 207
E Y G W +D Q+G+G HVWL S + H + N Y GE+H GLRHGRG F YANGAR
Sbjct: 266 ERYDGEWENDCQQGFGRHVWLVSPLNTSSKNGLSASSNPHDK--NWYEGEFHEGLRHGRGVFFYANGAR 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1711.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1711.1.1 >prot_P-wetherbeei_contig1711.1.1 ID=prot_P-wetherbeei_contig1711.1.1|Name=mRNA_P-wetherbeei_contig1711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=330bp MLWADRREHYRGFWRDDMQEGWGEHVWLADRPPSHVLDTHQQMCNVYRGEback to top mRNA from alignment at P-wetherbeei_contig1711:1..1155+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1711.1.1 ID=mRNA_P-wetherbeei_contig1711.1.1|Name=mRNA_P-wetherbeei_contig1711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1155bp|location=Sequence derived from alignment at P-wetherbeei_contig1711:1..1155+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1711:1..1155+ >mRNA_P-wetherbeei_contig1711.1.1 ID=mRNA_P-wetherbeei_contig1711.1.1|Name=mRNA_P-wetherbeei_contig1711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig1711:1..1155+ (Phaeothamnion wetherbeei SAG_119_79)back to top |