prot_P-wetherbeei_contig17105.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17105.1.1
Unique Nameprot_P-wetherbeei_contig17105.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length52
Homology
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A6P5TY53_PRUAV (uncharacterized protein LOC110771896 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5TY53_PRUAV)

HSP 1 Score: 64.7 bits (156), Expect = 7.280e-11
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T SPVVRHTT+R VLAHA + +W +HQ+DVK A+L   L E VYM  P G
Sbjct:   65 TFSPVVRHTTVRLVLAHATKNHWELHQLDVKNAFLHGDLQEEVYMKQPQG 114          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A8J5BQH4_9ASCO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Yarrowia sp. E02 TaxID=2768841 RepID=A0A8J5BQH4_9ASCO)

HSP 1 Score: 63.5 bits (153), Expect = 1.960e-10
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MTHSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            ++ SPV+R  ++R +LA AA  NWAVHQMDVKTA+L   LDE VY++PP G
Sbjct: 1516 LSFSPVIRFESVRFLLAMAANYNWAVHQMDVKTAFLYGVLDEPVYLTPPPG 1566          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A2P6P7L4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P7L4_ROSCH)

HSP 1 Score: 60.5 bits (145), Expect = 2.380e-9
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T SPVVRHTT+R VLA AA+  W +HQ+DVK  +L   L E VYMS P G
Sbjct:  108 TFSPVVRHTTVRLVLAMAAQFGWKLHQLDVKNTFLHGILKEEVYMSQPPG 157          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A833XDW1_JUGRE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Juglans regia TaxID=51240 RepID=A0A833XDW1_JUGRE)

HSP 1 Score: 59.3 bits (142), Expect = 6.000e-9
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T +PV + TT+R +LA AA+ NW +HQ+DV  A+L   LDE VYM PP G
Sbjct:   65 TFAPVAKMTTVRCLLAIAAKKNWIIHQLDVNNAFLHGDLDEEVYMIPPPG 114          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A061FYB5_THECC (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061FYB5_THECC)

HSP 1 Score: 55.1 bits (131), Expect = 6.590e-9
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T +PV +  T+R +L+ AA  +WA+HQMDVK A+L   LDE VYM  P G
Sbjct:    6 TFAPVAKLNTIRVLLSLAANLDWALHQMDVKNAFLNGELDEEVYMDLPPG 55          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 58.9 bits (141), Expect = 8.340e-9
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T +PVV+ T+LR +LA AA+ +  VHQMDVKTAYL   L+E +Y+ PP G
Sbjct:  709 TFAPVVKFTSLRTLLALAAKEDLEVHQMDVKTAYLHGELEEEIYLQPPAG 758          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A537R0H1_9PROT (DDE-type integrase/transposase/recombinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R0H1_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 1.140e-8
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T +PV + TTLR +L  AA A+W +HQMDVKTA+L   LDE +YM  P G
Sbjct:  457 TFAPVAKFTTLRILLMLAAAADWEIHQMDVKTAFLCGDLDEEIYMEVPEG 506          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: W4JU79_HETIT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JU79_HETIT)

HSP 1 Score: 54.7 bits (130), Expect = 1.690e-8
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            THSPV R  + R V + AA+ NW + Q+DVK+AYL   LDE ++M  P G
Sbjct:   11 THSPVARFESFRLVFSLAAKENWLLEQIDVKSAYLNGKLDEEIFMRQPEG 60          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A834D211_JUGRE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Juglans regia TaxID=51240 RepID=A0A834D211_JUGRE)

HSP 1 Score: 57.8 bits (138), Expect = 2.100e-8
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T SPVV+HTT+R VLA A   NW +HQ+D+  A+L   LDE V+M  P G
Sbjct:   65 TFSPVVKHTTVRMVLALAVSFNWNIHQLDISNAFLHGFLDEEVFMEQPQG 114          
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Match: A0A5N5I5B1_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5I5B1_9ROSA)

HSP 1 Score: 57.8 bits (138), Expect = 2.130e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 THSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPTG 51
            T SPVVRHTT+R +LA A + +W++ Q+D+K A+L   L+E VYM  P G
Sbjct:  859 TFSPVVRHTTVRLILALATQFSWSLRQLDIKNAFLHGDLEEDVYMKQPQG 908          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17105.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P5TY53_PRUAV7.280e-1160.00uncharacterized protein LOC110771896 n=1 Tax=Prunu... [more]
A0A8J5BQH4_9ASCO1.960e-1058.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P6P7L4_ROSCH2.380e-960.00Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A833XDW1_JUGRE6.000e-954.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A061FYB5_THECC6.590e-952.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZY34_9AGAM8.340e-956.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A537R0H1_9PROT1.140e-856.00DDE-type integrase/transposase/recombinase n=1 Tax... [more]
W4JU79_HETIT1.690e-850.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A834D211_JUGRE2.100e-854.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N5I5B1_9ROSA2.130e-852.00Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..51
e-value: 6.0E-14
score: 52.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17105contigP-wetherbeei_contig17105:569..724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17105.1.1mRNA_P-wetherbeei_contig17105.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17105 488..859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17105.1.1 ID=prot_P-wetherbeei_contig17105.1.1|Name=mRNA_P-wetherbeei_contig17105.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
MTHSPVVRHTTLRAVLAHAARANWAVHQMDVKTAYLKAPLDEIVYMSPPT
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2