mRNA_P-wetherbeei_contig1710.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1710.3.1
Unique NamemRNA_P-wetherbeei_contig1710.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A836CQF3_9STRA (Cation_ATPase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQF3_9STRA)

HSP 1 Score: 275 bits (702), Expect = 8.130e-76
Identity = 139/273 (50.92%), Postives = 185/273 (67.77%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLGEDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKRVLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGKS 1210
            VLATFF GMPQPLS+ LMI+IS  TDVF+GVALMNEP E  IM E PRD ++ARL+DA+LV YAY FYANL+S  AF+NYF Y   RGPT  + D +  +     ++ FPAGY P QL+FAW+WG   G    D  +A+NT S+VFF+ + VGQ+ H LS+R+KAPY+  A+L              +G++ R    +++ R V RV+ AW G+  + + LTE+PA+Q + GTGSVP +NWG A G+SA  F+IAEARKW I L+  S +G++
Sbjct: 1470 VLATFFLGMPQPLSSLLMILISVATDVFAGVALMNEPPEPRIMAEPPRDVRKARLVDARLVAYAYLFYANLISAAAFINYFAYMAARGPT--INDQLQVE---VAESPFPAGYAPGQLLFAWDWGQGGGARAADQLSAANTASSVFFVTLVVGQMGHLLSIRRKAPYFVEAVLS------------GSGLSERCRAVLREVRVVPRVVAAWLGSYAVALILTEVPAIQRVAGTGSVPAVNWGYAIGFSACVFVIAEARKWAIHLYSTSVIGRT 1725          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A7S3MA87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MA87_9STRA)

HSP 1 Score: 198 bits (503), Expect = 4.880e-50
Identity = 110/228 (48.25%), Postives = 141/228 (61.84%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLGEDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVK---RVLLAWTGAVIIMVGLTEIP 1066
            +LATFF GMPQPLS FLMI+I CFTDVF G+ALMNE  E  IM   PRD K  RLID KL+ Y+Y FYAN +S+GAF  +F Y   RGP  + P+PVP D  G     FP GY P QL+FAWNW + +  LG+D   A+N GS++FF+A+ V QL H LSVR+K PY+  A+L     GT      +     R+W  I QT P      ++ AW G+ ++ + +   P
Sbjct:  889 MLATFFLGMPQPLSAFLMIIICCFTDVFGGLALMNELPEGDIMDRPPRDVKNMRLIDWKLLLYSYMFYANAMSIGAFYMFFHYMFYRGPHDL-PNPVPVDDDG--TRSFPMGYTPGQLLFAWNWAVNDNALGDDMIQAANVGSSIFFVALVVAQLGHVLSVRRKTPYFVEAVL-----GTKEYANDARPWYLRVWAEI-QTIPQNMPWHIITAWVGSTVVAIIVVHGP 1107          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: UPI001D053C41 (e1-E2 ATPase domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D053C41)

HSP 1 Score: 96.7 bits (239), Expect = 5.400e-17
Identity = 81/281 (28.83%), Postives = 124/281 (44.13%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLG---EDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKR------VLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            VL   FFG+P PLS+FLMI+I  FTD+F  ++L+ E  E  ++   PR+ KR  LI  K+   AY F   + +V A   +F+Y   +                       AG    Q+ F +  G +EG  G    D TA + TG  V+F+ + + Q  + L+VR +                               ++I Q  P  +      +LL+   +++I + +TE+P +QTL GT SVP   W I    +     + E RK ++ L PN  V K
Sbjct:  852 VLLNVFFGVPLPLSSFLMIIICVFTDLFLSLSLIMEKEEFNLLSLPPRNHKRDHLITVKIYIQAYLFTGTMETVIAHAMFFLYYWKK-----------------------AGIPIGQMFFLFE-GYSEGFHGYSANDLTAFNATGQCVYFVTLVILQWGNILAVRNRR------------------------------LSILQADPFTKKRRNPWLLLSMGVSLVIAIFVTEVPGIQTLFGTASVPIEFWVIPIPLALAVLCMDEIRKLVVRLLPNGPVAK 1078          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A136IT80_9PEZI (Calcium-transporting ATPase 1 n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136IT80_9PEZI)

HSP 1 Score: 96.7 bits (239), Expect = 5.450e-17
Identity = 82/279 (29.39%), Postives = 125/279 (44.80%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLG---EDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKR------VLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSV 1201
            VL   FFG+P PLS+FLMI+I  FTD+F  ++L+ E AE  ++   PRD +R  LI A++ G AY F   + +V A   +F+Y                           AG   S+L F +  G ++G  G   ++ TA +NTG  V+F+ + + Q  + L+VR +                               M+I Q  PV +      ++L+   ++ I V +TE+P LQ L GT SVP   W I    +     + E RK ++   P   V
Sbjct:  871 VLVNVFFGVPLPLSSFLMIIICVFTDLFLSMSLIMEKAEFDLLSLPPRDVRRDHLITARIYGQAYLFTGCMETVIAHSMFFLYMWRY-----------------------AGMPISELFFLFE-GYSDGYRGYTQDELTAFNNTGQCVYFVCLVILQWGNILAVRNRR------------------------------MSIIQADPVTKARRNPWLILSVVISLGIAVFVTEVPGLQNLFGTASVPIEFWLIPIPLALAILCVDEIRKVLVRAFPKGPV 1095          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A8H7SY72_9FUNG (Cation_ATPase_N domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SY72_9FUNG)

HSP 1 Score: 95.9 bits (237), Expect = 9.590e-17
Identity = 75/274 (27.37%), Postives = 126/274 (45.99%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADF--PAGYVPSQLIFAWNWGIAEGPLGEDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKRVLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            VL   FFG PQ LS+F MI+I   TD+   +ALM E  E  ++   PR  K  RL++AKL+ +AY F   +  + +   +F+Y    G        +P     F+ +DF  P GY+              G   E+  A +NT  +++F+ + + Q  + LS R +        L ++              A  LW   +       +L++ +  +II+     +P   T+ GT  +P   W I FGW+A   ++ E+RK++   +P+S +G+
Sbjct:  891 VLVNIFFGCPQTLSSFQMIVICVLTDLGPSMALMMEKPEAGLLNRPPRKPKMDRLVNAKLLAHAYGFIGLMEMLSSQFLFFLYMSYNG--------LPPSKIFFSFSDFNSPNGYL--------------GFTAEEIIALTNTAQSIYFVNLVICQWGNVLSSRTRR-------LSITQ-------------ANPLWGPNQNLCLFAAMLISLSITLIIL----YVPVFNTVLGTSPIPIKFWFIPFGWAAFIMVMDESRKFLARKYPDSFIGR 1118          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: UPI001D275163 (cation-transporting ATPase pma1 n=1 Tax=Microdochium trichocladiopsis TaxID=1682393 RepID=UPI001D275163)

HSP 1 Score: 95.5 bits (236), Expect = 1.190e-16
Identity = 79/279 (28.32%), Postives = 125/279 (44.80%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLG---EDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKR------VLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSV 1201
            VL   FFG+P PLS+FLMI+I  FTD+F  ++L+ E AE  ++  +PRD +R  LI A++ G AY     + +V A   +F+Y                           AG   S+L F +  G ++G  G   ++  A +NTG  V+F+ + + Q  + L+VR +                               M+I Q  PV +      ++L+   ++ I V +TE+P +Q L GT SVP   W I    +     + E RK ++ L P   +
Sbjct:  772 VLVNVFFGVPLPLSSFLMIIICVFTDLFLSMSLIMEKAEFDLLSLKPRDVRRDHLITARIYGQAYLLTGCMETVIAHSMFFLYMWRY-----------------------AGMPISELFFLFE-GYSDGYRGYTMDELVAFNNTGQCVYFVCLVILQWGNILAVRNRR------------------------------MSILQADPVTKARRNPWLVLSVIISLAIAVFVTEVPGIQNLFGTASVPIEFWLIPIPLALAILFVDEIRKLLVRLFPKGPI 996          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A420YB29_9PEZI (Cation_ATPase_N domain-containing protein n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420YB29_9PEZI)

HSP 1 Score: 95.5 bits (236), Expect = 1.250e-16
Identity = 81/281 (28.83%), Postives = 125/281 (44.48%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLG---EDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKR------VLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            VL   FFG+P PLS+FLMI+I  FTD+F  ++L+ E AE  ++   PR+ KR  LI AK+ G AY F   L +  A   +F+Y                           AG    +L F +  G  EG  G   +  T  +N G  V+F+ + + Q  + L+VR +                               ++I Q  PV +      ++L+   +++I + +TE+P LQTL GT SVP   W I    +    ++ E RK ++ + PN  + K
Sbjct:  863 VLLNVFFGVPLPLSSFLMIIICIFTDLFLSLSLIMEKAEFDLLSLPPRNHKRDHLITAKIYGQAYLFTGFLETTIAHAMFFLYLWKY-----------------------AGMPIHELFFLYE-GYTEGFRGYSQDQLTHFNNVGQCVYFVTLVILQWGNVLAVRNRR------------------------------LSILQADPVTKKRRNPWLVLSMGISLVIAIFVTEVPGLQTLFGTASVPIEFWLIPVPLALGILMMDEIRKLLVRVFPNGPLAK 1089          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: F1A571_DICPU (Cation_ATPase_N domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A571_DICPU)

HSP 1 Score: 95.1 bits (235), Expect = 1.600e-16
Identity = 75/275 (27.27%), Postives = 126/275 (45.82%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYA---NLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLGEDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKRVLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            V+   FFG P PLS+FLMI+I CFTD+F  + L+ E  ET ++K +PR+ K+  LI  K+   +Y F     +++S+G F  Y         T +V          F + DF   +V S   F     I               G++V F+ +   Q  + L++R +          L+D                    I++ R    + L++  ++ +++ +TE+  +QTL GTGSVP   W + F ++ + F++ E RK+ +    NS + K
Sbjct:  806 VIVNSFFGTPSPLSSFLMIIICCFTDLFLSLPLIMEKEETDLLKLKPRNAKKDHLITMKIYIQSYLFMGVLQSVISIGMFFCYLYEYTGLHFTDLV--------FSFGNIDFTKAHVSSDDFFKVYVPI---------------GNSVVFVTLVFLQWGNLLAIRNRRKSL------LADP-------------------IRKKRRNPYIFLSFVASIAVILIVTEVEWIQTLFGTGSVPAKYWFLPFPFAVIIFLLDEIRKFFVRNFKNSPIAK 1032          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A2K3Q7U5_9HYPO (Sodium/potassium-transporting ATPase subunit alpha-2 n=2 Tax=Tolypocladium TaxID=29909 RepID=A0A2K3Q7U5_9HYPO)

HSP 1 Score: 95.1 bits (235), Expect = 1.650e-16
Identity = 77/281 (27.40%), Postives = 126/281 (44.84%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLG---EDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKR------VLLAWTGAVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            V+   FFG+P PLS FLMI+I  FTD+F  ++L+ E  E  ++   PR+ KR  LI  K+   AY F   + +V A   +F+Y   +                       AG    ++ F +  G +EG  G   ++ T  ++TG +++F+ + + Q  + L+VR +                               ++I Q  PV +      +LL+   +++I V +TE+P +QTL GT SVP   W I    +     + E RK ++ L PN  V +
Sbjct:  866 VILNVFFGVPLPLSAFLMIIICVFTDLFLSLSLIMEKEEFDLLSLPPRNHKRDHLITTKIYIQAYLFVGTMETVIAHAMFFLYYWKK-----------------------AGIPVREMFFLFE-GYSEGFHGYTTDELTQFNSTGQSIYFVTLVILQWGNILAVRNRR------------------------------LSILQADPVTKKRRNPWLLLSMLISLVIAVFVTEVPGIQTLFGTASVPIEYWVIPIPLALAVLCMDEIRKLVVRLWPNGPVAR 1092          
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Match: A0A8H7PGL8_9FUNG (Cation_ATPase_N domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PGL8_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 2.860e-16
Identity = 81/277 (29.24%), Postives = 129/277 (46.57%), Query Frame = 2
Query:  392 VLATFFFGMPQPLSTFLMIMISCFTDVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVGAFLNYFIY-KENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWGIAEGPLGEDA-TAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDLSDDGTFNVGGGSAGVAARLWMAIKQTRPVKRVLLAWTG---AVIIMVGLTEIPALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGK 1207
            VL   F G P PLS+FLMI+I CFTD+F  +AL+ E  E  ++ ++PR+ KR  LI+ K+   +Y F  ++ ++ +   +F++ KE+ G T    D V    SG      P G   +     W W     PL  D  TA S +G  V F+ + + Q  + LS+R +      A                              RP +R L  + G   ++++ + +TE+P +Q    TGSVP  +W + F  +    ++ E RK ++   PNS + K
Sbjct:  842 VLVNAFAGTPLPLSSFLMIVICCFTDLFPCLALIMEREEFDLLSQKPRNPKRDHLINMKIYLQSYIFMGSMQTICSLSMFFLFMKEHTGLTWY--DWVGTYSSG------PWGPENNPT---WGWDSTGNPLTSDQFTAISCSGQCVTFVTLVILQWGNILSIRNRKLSILQA---------------------------DPIRPARRNLWLFLGMACSLVVAIIVTEVPWIQNTLLTGSVPIKHWLLPFPLALGILMMDEIRKLLVRSFPNSIIAK 1080          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1710.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQF3_9STRA8.130e-7650.92Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A7S3MA87_9STRA4.880e-5048.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
UPI001D053C415.400e-1728.83e1-E2 ATPase domain-containing protein n=1 Tax=Hir... [more]
A0A136IT80_9PEZI5.450e-1729.39Calcium-transporting ATPase 1 n=1 Tax=Microdochium... [more]
A0A8H7SY72_9FUNG9.590e-1727.37Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
UPI001D2751631.190e-1628.32cation-transporting ATPase pma1 n=1 Tax=Microdochi... [more]
A0A420YB29_9PEZI1.250e-1628.83Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
F1A571_DICPU1.600e-1627.27Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A2K3Q7U5_9HYPO1.650e-1627.40Sodium/potassium-transporting ATPase subunit alpha... [more]
A0A8H7PGL8_9FUNG2.860e-1629.24Cation_ATPase_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1710contigP-wetherbeei_contig1710:4031..6687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog655981.L8FUF3
PFAMsCation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
Model size1899
Max annot lvl4751|Fungi
KEGG koko:K01539
KEGG TC3.A.3.1
KEGG Pathwayko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978
Hectar predicted targeting categorymitochondrion
Exons4
Evalue4.31e-18
EggNOG OGsCOG0474@1|root,KOG0203@2759|Eukaryota,38BIP@33154|Opisthokonta,3NUZM@4751|Fungi,3QJCQ@4890|Ascomycota,210Z3@147548|Leotiomycetes
EC3.6.3.9
DescriptionCation transporter/ATPase, N-terminus
Cds size1350
COG categoryP
BRITEko00000,ko00001,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1710.3.1prot_P-wetherbeei_contig1710.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1710 4564..6671 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.836597-UTR-P-wetherbeei_contig1710:4030..45631683186107.836597-UTR-P-wetherbeei_contig1710:4030..4563Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1710 4031..4563 -
1683186107.9153154-UTR-P-wetherbeei_contig1710:6671..66871683186107.9153154-UTR-P-wetherbeei_contig1710:6671..6687Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1710 6672..6687 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.8605924-CDS-P-wetherbeei_contig1710:4563..48541683186107.8605924-CDS-P-wetherbeei_contig1710:4563..4854Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 4564..4854 -
1683186107.871452-CDS-P-wetherbeei_contig1710:5109..54421683186107.871452-CDS-P-wetherbeei_contig1710:5109..5442Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 5110..5442 -
1683186107.8822227-CDS-P-wetherbeei_contig1710:5766..59411683186107.8822227-CDS-P-wetherbeei_contig1710:5766..5941Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 5767..5941 -
1683186107.8990076-CDS-P-wetherbeei_contig1710:6120..66711683186107.8990076-CDS-P-wetherbeei_contig1710:6120..6671Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 6121..6671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1710.3.1

>prot_P-wetherbeei_contig1710.3.1 ID=prot_P-wetherbeei_contig1710.3.1|Name=mRNA_P-wetherbeei_contig1710.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=450bp
MKLGQLRQQRGRAYIAVSVGKRGFSKRVTEPRLQVPSGRSVAGRCISPLP
PASGRRCLPPLQPASGRHCLLPLPPTFGRRCLPPLPPASGRLPLSTHRHA
AAAAIAAAATAPIDTAMTAPTNRHQVLATFFFGMPQPLSTFLMIMISCFT
DVFSGVALMNEPAETAIMKEQPRDFKRARLIDAKLVGYAYFFYANLVSVG
AFLNYFIYKENRGPTGVVPDPVPADGSGFTDADFPAGYVPSQLIFAWNWG
IAEGPLGEDATAASNTGSAVFFIAIAVGQLLHHLSVRQKAPYYANAILDL
SDDGTFNVGGGSAGVAARLWMAIKQTRPVKRVLLAWTGAVIIMVGLTEIP
ALQTLCGTGSVPPLNWGIAFGWSALCFIIAEARKWIITLHPNSSVGKSQI
GVVSEQKAVRIKQPDRTQPLVIILGCGGESGGSSNSGFRRQHRRRQRRQ*
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mRNA from alignment at P-wetherbeei_contig1710:4031..6687-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1710.3.1 ID=mRNA_P-wetherbeei_contig1710.3.1|Name=mRNA_P-wetherbeei_contig1710.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2657bp|location=Sequence derived from alignment at P-wetherbeei_contig1710:4031..6687- (Phaeothamnion wetherbeei SAG_119_79)
GGGAGGGGTCGAATCTATGAAACTGGGGCAATTGCGCCAGCAGAGAGGGA GGGCATACATTGCTGTTTCGGTTGGCAAGCGCGGTTTCAGTAAACGGGTC ACTGAACCCCGGTTGCAAGTCCCCTCGGGCCGTTCCGTCGCCGGCCGCTG CATCTCGCCTTTGCCACCTGCCTCCGGCCGTCGCTGCCTCCCGCCTTTGC AACCCGCCTCCGGCCGTCACTGCCTCCTGCCATTGCCACCGACCTTCGGC CGCCGCTGCCTCCCGCCTTTGCCACCTGCCTCCGGCCGTCTGCCGCTGTC GACGCACCGCCATGCTGCCGCCGCTGCAATTGCTGCTGCTGCAACTGCTC CCATCGACACTGCAATGACTGCCCCGACGAACCGACACCAGGTGCTAGCA ACGTTCTTCTTCGGCATGCCGCAGCCGCTGTCGACGTTCCTCATGATCAT GATTTCGTGCTTCACGGACGTCTTCTCCGGTGTCGCTTTGATGAATGAGC CCGCGGAGACCGCCATCATGAAGGAGCAGCCACGCGATTTTAAAAGGGCG CGCTTAATTGATGCGAAGTAAGAACCGGTTCGCGCAATCTCTCGCTTCTA TATTGCGGGCTTTCCTCCGTTCATGCAAATGCAGCATAACTACTCCGTGT CTATTCTGTCCGGCCGCCATAGTCGCTGGCATCGCCGCATGCCGCCGCCG CCGTCGCGCCGTTGCCAGTTGCTTTCGTGTCCCGGCCCTTCGGCAGGCTG GTGGGGTACGCCTACTTCTTCTACGCCAACCTGGTCTCGGTGGGCGCTTT CCTAAACTACTTCATCTACAAGGAGAACCGCGGCCCGACGGGGGTCGTTC CCGACCCCGTCCCCGCGGACGGCAGCGGCTTCACCGACGCCGACTTCCCT GCGGGATACGTGCCGTCGCAGGTGCATATGTGTGCTCTGTATAGATGGGC GTGCCCTAGTGGCTTTCTGCGGAAACGGAATGCCGGAAGAATAGTACTCT TCAGGTCCCGCAGAGAGGTGGCGGAGGCGCCGGATCATCTTCGCTTTTGA AATAGAAGCGGCTCGGTTGCGGGGCTCTTTGTTTCGTTTAAAACGGGCGT ACAGCCGTTACCCTCGCCCCCCATATCTCAGATGGCACGCGGTGCCATAG TCAGGCTGAGCCTACTAGATTGATGAATCATCATTGTGAAAACTTTCTGT CCCGCTCTCCCTCGCCCCCCGTTATACGCGCTTCACCCTCCGCAGCTCAT CTTCGCCTGGAACTGGGGCATCGCCGAGGGGCCCCTGGGGGAAGACGCCA CGGCCGCCAGCAACACCGGGTCGGCCGTTTTCTTCATCGCCATCGCCGTC GGCCAGCTGCTGCACCACCTGAGCGTCCGCCAGAAGGCACCGTACTATGC CAACGCCATTCTGGACCTCTCCGACGACGGCACCTTCAATGTCGGCGGCG GTTCTGCCGGTGTGGCGGCGCGGCTGTGGATGGCGATCAAGCAGACGCGA CCGGTTAAGCGGGTGCTCCTGGCTTGGACCGGTGCCGTCATTATCATGGT CGGCCTCACGGAGATCCCGGCACTGCAGGTGTTTTGGGACACTTTTCTGC ACCGAGGCTGGGAAAAGAGGACACGTTCCGAGATCTCGCCGGCAAATGAC TCGTGGTTTCTGTTTCTGTTTCTGTTTCTGTTTCTGTCCCCGCAACTCCT CCGTGCAAAAGGCAACTTGTCGCTGCGGCCGAAATCTACGTACAAGATGC GGCACTCTGTCATGTTTCCAATTTTATCGTTTTCGCGTTGCTTCTAAAGG CCCCGTGCCTTTCCTTTTGTCTTCCAAACCCAGACGCTGTGTGGCACGGG CTCGGTCCCGCCGCTGAACTGGGGCATCGCCTTCGGCTGGTCGGCCCTCT GCTTCATAATTGCCGAGGCCCGCAAGTGGATCATCACCCTGCACCCGAAT TCGTCGGTCGGCAAATCGCAAATCGGCGTGGTAAGCGAGCAGAAGGCGGT AAGAATAAAGCAACCAGACAGAACCCAACCTCTAGTCATAATCCTTGGCT GCGGTGGCGAAAGTGGTGGCAGTAGCAATAGCGGTTTCCGGCGGCAGCAT CGCCGGCGGCAGCGGCGACAGTGACAAGCGGAAGCGGCGGCAGGGCAGCG GTGTCGATGCTTCGCAACAGCTGCAGTGGCAGGGGAGACGGCGCCCGGGG CGGAGTTAGTCATGAAGGGAAGGGACGGGATGGAAGGATGGGGATGGAGG GTGGAATACGATGGGATTGGGAAGGTACATGGGCAGGCAGCGGCATGGGC GCAGGTGGTGGTGGCGACCGGCAGAGTGCAAAGGCCTGGTGACAGAGAGC TTCGGGCTCGTCGTACGCCTGTACGTGCATTTTTTGGCGTTTCCGGCACG GGCTGGGGTCGGGTAAGCGGCGGGAACTGGCAGAAAGCAGAAGTGCCGGA CAGGGGCACCGGGGGATTGAAGCGTATGTTTAAAAAGCTGTGAAGTGATG GGACAACGGAAAACAACACAAAAATGGAAGGAAACAGACATGTACTTCGT TGAAAGAGATGGATGACAATGTACTTCGCATAAAAGAGGGCTCAGCCGTG GCTTGAGACAGTCTATGCGCAAGAGGCAGAAGCGGTCTTAATGTACACGG CAAGCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1710:4031..6687-

>mRNA_P-wetherbeei_contig1710.3.1 ID=mRNA_P-wetherbeei_contig1710.3.1|Name=mRNA_P-wetherbeei_contig1710.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1350bp|location=Sequence derived from alignment at P-wetherbeei_contig1710:4031..6687- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTGGGGCAATTGCGCCAGCAGAGAGGGAGGGCATACATTGCTGT
TTCGGTTGGCAAGCGCGGTTTCAGTAAACGGGTCACTGAACCCCGGTTGC
AAGTCCCCTCGGGCCGTTCCGTCGCCGGCCGCTGCATCTCGCCTTTGCCA
CCTGCCTCCGGCCGTCGCTGCCTCCCGCCTTTGCAACCCGCCTCCGGCCG
TCACTGCCTCCTGCCATTGCCACCGACCTTCGGCCGCCGCTGCCTCCCGC
CTTTGCCACCTGCCTCCGGCCGTCTGCCGCTGTCGACGCACCGCCATGCT
GCCGCCGCTGCAATTGCTGCTGCTGCAACTGCTCCCATCGACACTGCAAT
GACTGCCCCGACGAACCGACACCAGGTGCTAGCAACGTTCTTCTTCGGCA
TGCCGCAGCCGCTGTCGACGTTCCTCATGATCATGATTTCGTGCTTCACG
GACGTCTTCTCCGGTGTCGCTTTGATGAATGAGCCCGCGGAGACCGCCAT
CATGAAGGAGCAGCCACGCGATTTTAAAAGGGCGCGCTTAATTGATGCGA
AGCTGGTGGGGTACGCCTACTTCTTCTACGCCAACCTGGTCTCGGTGGGC
GCTTTCCTAAACTACTTCATCTACAAGGAGAACCGCGGCCCGACGGGGGT
CGTTCCCGACCCCGTCCCCGCGGACGGCAGCGGCTTCACCGACGCCGACT
TCCCTGCGGGATACGTGCCGTCGCAGCTCATCTTCGCCTGGAACTGGGGC
ATCGCCGAGGGGCCCCTGGGGGAAGACGCCACGGCCGCCAGCAACACCGG
GTCGGCCGTTTTCTTCATCGCCATCGCCGTCGGCCAGCTGCTGCACCACC
TGAGCGTCCGCCAGAAGGCACCGTACTATGCCAACGCCATTCTGGACCTC
TCCGACGACGGCACCTTCAATGTCGGCGGCGGTTCTGCCGGTGTGGCGGC
GCGGCTGTGGATGGCGATCAAGCAGACGCGACCGGTTAAGCGGGTGCTCC
TGGCTTGGACCGGTGCCGTCATTATCATGGTCGGCCTCACGGAGATCCCG
GCACTGCAGACGCTGTGTGGCACGGGCTCGGTCCCGCCGCTGAACTGGGG
CATCGCCTTCGGCTGGTCGGCCCTCTGCTTCATAATTGCCGAGGCCCGCA
AGTGGATCATCACCCTGCACCCGAATTCGTCGGTCGGCAAATCGCAAATC
GGCGTGGTAAGCGAGCAGAAGGCGGTAAGAATAAAGCAACCAGACAGAAC
CCAACCTCTAGTCATAATCCTTGGCTGCGGTGGCGAAAGTGGTGGCAGTA
GCAATAGCGGTTTCCGGCGGCAGCATCGCCGGCGGCAGCGGCGACAGTGA
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