mRNA_P-wetherbeei_contig171.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig171.5.1
Unique NamemRNA_P-wetherbeei_contig171.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: D7G8J2_ECTSI (Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J2_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 3.650e-31
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            VW NFM++++  A+ AD+  +SHPV+Q H GD++SI+ SF+ ITY KGA +LRML   +G   F RG+  F   HQY CA Q DLW+A+Q  C+  GV +DV  LM+PWL     P++
Sbjct:  324 VWNNFMSEVFVQAMLADSLENSHPVVQQHDGDIASILESFDTITYCKGASILRMLYRCVGPDRFLRGMADFVVSHQYLCATQEDLWKAVQGVCDRDGVALDVRGLMQPWLTRPKFPML 441          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A835YII6_9STRA (Aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII6_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.540e-22
Identity = 55/135 (40.74%), Postives = 71/135 (52.59%), Query Frame = 1
Query:  151 VWCNFMTD------IYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQ-----------IDVAALMRPWLQEAHSPVI 504
            VW +++ +      +   AL ADA+  SHPV Q HRG L+S++ SF+ ITYGKGA +LRML  HIG   F  G+R    RH +    Q DLW A+Q A +   V             DV ALM  WL   H P +
Sbjct:  260 VWSHYVDELLFPDAVMFEALMADAQPDSHPVAQQHRGHLASVLLSFDTITYGKGASLLRMLALHIGHDVFMDGMRRLLHRHHFGSVTQDDLWSALQHALDAARVSSGGDNSAASELTDVKALMDGWLTRRHFPAV 394          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A8J5AYF3_9DIPT (Aminopeptidase n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5AYF3_9DIPT)

HSP 1 Score: 91.3 bits (225), Expect = 2.810e-18
Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD+Y  AL  DA  +SHP+ +   G  S I   F+ I+Y KGACV+RML  +IG   F RG+  +  RHQY   +  DLW A++EA +       V A+M  W+++   PV+
Sbjct:  345 IWTQFVTDMYTQALELDALKNSHPI-EVEVGHPSEIDEIFDEISYNKGACVIRMLHHYIGDEDFRRGMNIYLTRHQYKNTVTEDLWAALEEASSK-----PVGAVMTSWIKQMGFPVV 456          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A7S0CNU8_MICPS (Aminopeptidase (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CNU8_MICPS)

HSP 1 Score: 90.9 bits (224), Expect = 3.880e-18
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 1
Query:  148 RVWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            RVW  F+ +     L  D+  SSHPV +      S +   F+ I+Y KG+CV+RMLEAH+G   F  G+R +  RHQYA A  +DLW+A+ EA  +     DVA LM  W  +   P++
Sbjct:  486 RVWSQFLVNEQSMGLGLDSLRSSHPV-EVPIAAASQVTEIFDAISYSKGSCVIRMLEAHLGEATFREGMRLYVRRHQYANAGTTDLWQALSEASGE-----DVAGLMSCWTAQTGYPIL 598          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A6P3DVW8_BOMIM (Aminopeptidase n=14 Tax=Apinae TaxID=70987 RepID=A0A6P3DVW8_BOMIM)

HSP 1 Score: 90.5 bits (223), Expect = 5.210e-18
Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD Y  AL  DA  +SHP+ +   G  S I   F++I+Y KGACV+RML ++IG   F +G+  +  +H YA A   DLW A++EA N      DV ++M  W ++   PV+
Sbjct:  351 IWTQFVTDTYIRALELDALKNSHPI-EVPVGHPSEIDEIFDDISYNKGACVIRMLHSYIGDDDFRKGMNLYLKKHSYANAETGDLWDALEEASNK-----DVRSVMSTWTEQQGFPVV 462          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A084VPY2_ANOSI (AGAP005728-PA-like protein n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084VPY2_ANOSI)

HSP 1 Score: 89.7 bits (221), Expect = 9.930e-18
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD+Y HAL  D   +SHP+ +   G  S I   F+ I+Y KGA V+RML  +IG   F RG+  +  RHQY      DLW+A+QEA +       V A+M  W+++   PV+
Sbjct:  569 IWTQFVTDMYTHALELDCLRNSHPI-EVPVGHPSEIDEIFDEISYNKGASVIRMLHHYIGDEDFKRGMHVYLTRHQYRNTSTEDLWQALQEASSK-----PVGAVMSTWIKQMGFPVV 680          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A182JLL4_9DIPT (Uncharacterized protein n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182JLL4_9DIPT)

HSP 1 Score: 89.7 bits (221), Expect = 9.940e-18
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD+Y HAL  D   +SHP+ +   G  S I   F+ I+Y KGA V+RML  +IG   F RG+  +  RHQY      DLW+A+QEA +       V A+M  W+++   PV+
Sbjct:  582 IWTQFVTDMYTHALELDCLRNSHPI-EVPVGHPSEIDEIFDEISYNKGASVIRMLHHYIGDEDFKRGMHVYLTRHQYRNTSTEDLWQALQEASSK-----PVGAVMSTWIKQMGFPVV 693          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A2P6MPF7_9EUKA (Aminopeptidase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MPF7_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 1.330e-17
Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 1
Query:  148 RVWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            R W  FM DI+   +  D  A++HPV ++  GD   I   F+ ++YGKGACVLRM+  +IG  AF+  +R F  +  Y+CA   DL++A+ EA +     +DV+++M  W++ +  PV+
Sbjct:  383 RYWSYFMRDIFKLTMEYDESANTHPV-ESEVGDPKEISEIFDLMSYGKGACVLRMVSNYIGMGAFWSAIRIFLRKFSYSCAGTEDLYQALSEASS-----VDVSSIMNCWMKFSGHPVL 495          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: UPI001442FB0F (puromycin-sensitive aminopeptidase isoform X1 n=2 Tax=Megalopta genalis TaxID=115081 RepID=UPI001442FB0F)

HSP 1 Score: 88.2 bits (217), Expect = 3.330e-17
Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD Y  AL  DA  +SHP+ +   G  S I   F+ I+Y KGACV+RML A+IG   F +G+  +  R+ Y  A   DLWRA++EA N      +V ++M  W ++   PV+
Sbjct:  352 IWSQFVTDTYIGALELDALQNSHPI-EVPVGHPSEIDEIFDEISYNKGACVIRMLHAYIGDDDFRKGMNLYLNRYSYGNAETMDLWRALEEASNK-----NVGSVMSTWTEQQGFPVV 463          
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Match: A0A6P8WK09_DROAB (puromycin-sensitive aminopeptidase n=2 Tax=Drosophila TaxID=32281 RepID=A0A6P8WK09_DROAB)

HSP 1 Score: 88.2 bits (217), Expect = 3.380e-17
Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  151 VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGACVLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQIDVAALMRPWLQEAHSPVI 504
            +W  F+TD+Y  AL  D+  +SHP+ +   G  S I   F+ I+Y KGA V+RML  +IG   F +G+  +  RHQY+     DLW+A+QEA +      DVAA+M  W +    PV+
Sbjct:  489 IWTQFVTDMYTRALELDSLKNSHPI-EVPVGHPSEIDEIFDEISYNKGASVIRMLHDYIGEDDFRKGMHLYLTRHQYSNTSTEDLWQALQEASSK-----DVAAVMSSWTKYKGFPVV 600          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig171.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J2_ECTSI3.650e-3148.31Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YII6_9STRA3.540e-2240.74Aminopeptidase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A8J5AYF3_9DIPT2.810e-1839.83Aminopeptidase n=2 Tax=Bradysia TaxID=35571 RepID=... [more]
A0A7S0CNU8_MICPS3.880e-1840.34Aminopeptidase (Fragment) n=1 Tax=Micromonas pusil... [more]
A0A6P3DVW8_BOMIM5.210e-1839.83Aminopeptidase n=14 Tax=Apinae TaxID=70987 RepID=A... [more]
A0A084VPY2_ANOSI9.930e-1839.83AGAP005728-PA-like protein n=1 Tax=Anopheles sinen... [more]
A0A182JLL4_9DIPT9.940e-1839.83Uncharacterized protein n=1 Tax=Anopheles atroparv... [more]
A0A2P6MPF7_9EUKA1.330e-1737.82Aminopeptidase n=1 Tax=Planoprotostelium fungivoru... [more]
UPI001442FB0F3.330e-1739.83puromycin-sensitive aminopeptidase isoform X1 n=2 ... [more]
A0A6P8WK09_DROAB3.380e-1739.83puromycin-sensitive aminopeptidase n=2 Tax=Drosoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig171contigP-wetherbeei_contig171:9807..11277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8J2
PFAMsERAP1_C,Peptidase_M1
Model size505
Max annot lvl2759|Eukaryota
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
Exons4
Evalue5.98e-32
EggNOG OGsCOG0308@1|root,KOG1046@2759|Eukaryota
EC3.6.1.1
Descriptionmetalloaminopeptidase activity
Cds size504
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.6783075-CDS-P-wetherbeei_contig171:9806..100011683186107.6783075-CDS-P-wetherbeei_contig171:9806..10001Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 9807..10001 +
1683186107.691073-CDS-P-wetherbeei_contig171:10301..103981683186107.691073-CDS-P-wetherbeei_contig171:10301..10398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 10302..10398 +
1683186107.7111526-CDS-P-wetherbeei_contig171:10717..108451683186107.7111526-CDS-P-wetherbeei_contig171:10717..10845Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 10718..10845 +
1683186107.7351255-CDS-P-wetherbeei_contig171:11192..112761683186107.7351255-CDS-P-wetherbeei_contig171:11192..11276Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 11193..11276 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig171.5.1prot_P-wetherbeei_contig171.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig171 9807..11276 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig171.5.1

>prot_P-wetherbeei_contig171.5.1 ID=prot_P-wetherbeei_contig171.5.1|Name=mRNA_P-wetherbeei_contig171.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
LDADSDGGRGGGLHTAAAAAAAGLVDAGSAWAPPAAAGMRVRSCSGAGGR
VWCNFMTDIYHHALAADAEASSHPVMQNHRGDLSSIMRSFNNITYGKGAC
VLRMLEAHIGAPAFFRGLRAFTARHQYACAMQSDLWRAIQEACNDIGVQI
DVAALMRPWLQEAHSPVI
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mRNA from alignment at P-wetherbeei_contig171:9807..11277+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig171.5.1 ID=mRNA_P-wetherbeei_contig171.5.1|Name=mRNA_P-wetherbeei_contig171.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1471bp|location=Sequence derived from alignment at P-wetherbeei_contig171:9807..11277+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGACGCTGACAGCGACGGCGGCCGCGGCGGTGGCCTGCACACGGCGGC TGCGGCGGCCGCTGCCGGGTTGGTAGACGCCGGCTCGGCGTGGGCGCCAC CGGCGGCGGCGGGGATGCGCGTAAGGAGCTGCAGCGGCGCGGGCGGCCGC GTCTGGTGCAATTTTATGACCGACATCTACCACCACGCCCTTGCGGTGAG TCATGGAGAAAGGCGCTGCAAGAACGCTACCGTTCTGTCTTTAGCCGGCA GTTTCAGTCTGTGCGTTTCTCTGTCGAAAGTTTCACCGTGGGGGGCTTTC TGTCGACGGTTTCAGCGTGGTCGATAATGTTTCTGGATGTCTTTAAACCT TTCGGCTAGGGGTCTTGCCATTTCGGTGATGCGGCTTGCTCTAGCGTTCA GACGACCAAAGCCGTTGGAGACTCAGTCGTCTTGGTTTCCGTTTCCGACA TCTAATTCATTTTGCTGCGGTGAGTTCGTTCCGGTTCGGACACAGGCGGA CGCGGAGGCGTCGTCCCACCCAGTGATGCAGAACCATCGCGGCGACCTCA GTTCGATCATGCGCTCCTTCAACAACATCACTTACGGGAAAGGTGAGGCG CGAAAGGAGGAAGGCGAACAGCTTTAACGACTGTTGACAATACAACAGGG TTGTGTCAAGCCGGCGACATTGGAGGAGAAAGGCGTCGCATTTGGCTTCC ACTTGGTTTCTGTTTTCCGCTTCTTTGGCCGTTCTCGTTCCAGACGAAAG GGGGAAGCCTGTTTGCTCTGCATATTGAACCGTTTCTCAATCCTCTTGGC GCTGTGTTTATTGATTGCGTACGACACTACTACCTAACGGACTACCCCAA AACATTGAACGCGATGTAACCGACGTAACCGACGTAACCGATCGGCCGGT CGGGTCGCCAGGCGCGTGCGTGCTGCGCATGCTAGAGGCTCACATCGGCG CACCGGCCTTCTTCCGCGGCCTGCGCGCCTTCACGGCGCGCCACCAGTAT GCATGCGCCATGCAGAGCGACCTCTGGCGCGCTATCCAGGTGTGCACTCT GCCCTTCTTTTTTCGTAGTCTTTTCCCTGTGAGGTCTTCCCTGAAGTCTC TCCTTACCGATGGATCGTCAGGCACTTGGGTCGAGGTCGTTCATGCACTG CATGCTTTCCTCTATCTGCGCATCGCATCCTTCTCTCTCCCTTGCAATCC CCGCCGGTATCACACAGTGGCACGGCCATAAGACGAGGGTTGCCACTGCT GGCAGGCATGCCCATCCCTGACTTCCCTTCGGTCCTTCCTGAACTGCCGC CGGGTGTCCAATTAATGCGCGTAACCGCCCTTTCGACGCCCGTAACGGGC TCTTTTCCTCCCGTGTGCCGCCCGCCCCGCAAGCAGGAGGCGTGCAACGA TATTGGCGTGCAAATCGACGTCGCGGCGCTCATGCGGCCGTGGCTCCAGG AGGCGCATTCCCCGGTGATCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig171:9807..11277+

>mRNA_P-wetherbeei_contig171.5.1 ID=mRNA_P-wetherbeei_contig171.5.1|Name=mRNA_P-wetherbeei_contig171.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig171:9807..11277+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGACGCTGACAGCGACGGCGGCCGCGGCGGTGGCCTGCACACGGCGGC
TGCGGCGGCCGCTGCCGGGTTGGTAGACGCCGGCTCGGCGTGGGCGCCAC
CGGCGGCGGCGGGGATGCGCGTAAGGAGCTGCAGCGGCGCGGGCGGCCGC
GTCTGGTGCAATTTTATGACCGACATCTACCACCACGCCCTTGCGGCGGA
CGCGGAGGCGTCGTCCCACCCAGTGATGCAGAACCATCGCGGCGACCTCA
GTTCGATCATGCGCTCCTTCAACAACATCACTTACGGGAAAGGCGCGTGC
GTGCTGCGCATGCTAGAGGCTCACATCGGCGCACCGGCCTTCTTCCGCGG
CCTGCGCGCCTTCACGGCGCGCCACCAGTATGCATGCGCCATGCAGAGCG
ACCTCTGGCGCGCTATCCAGGAGGCGTGCAACGATATTGGCGTGCAAATC
GACGTCGCGGCGCTCATGCGGCCGTGGCTCCAGGAGGCGCATTCCCCGGT
GATC
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