mRNA_P-wetherbeei_contig17090.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: D7G8M8_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M8_ECTSI) HSP 1 Score: 106 bits (265), Expect = 5.540e-26 Identity = 58/86 (67.44%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 7 AHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
AHR +LSLRS P+RAML+SGMRESF+ V +KDIR +VF +LLTYLYTDTLQL+ +DI ELLV ANQ YTL DL++LCEG L
Sbjct: 107 AHRALLSLRSDPMRAMLRSGMRESFTMDVLVKDIRPAVFTALLTYLYTDTLQLQRPEDITELLVVANQ----YTLTDLLSLCEGFL 188
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.620e-18 Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 7 AHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEG 258
AHR +L+ RSAPLRAML GMRES S VV ++D R SVF +LL Y+YTD L + +D++EL+VAA QY L++L ALCEG
Sbjct: 1533 AHRAILAQRSAPLRAMLCGGMRESLSAVVDVRDTRPSVFAALLLYVYTDRLMPAAPEDVVELMVAA----CQYGLEELAALCEG 1612
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A067CMH8_SAPPC (BTB domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CMH8_SAPPC) HSP 1 Score: 62.8 bits (151), Expect = 1.510e-9 Identity = 37/88 (42.05%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 10 HRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQ---LESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
H++VLSL S RA+ +G RE+ + + + D+R VF+++L+YLY +L+ L+S DD +ELL+AA++ Y LD L LCE L
Sbjct: 278 HKIVLSLGSDRFRALFSAGFREASATEIVLPDMRLDVFEAMLSYLYRGSLEAHALDSMDDAIELLMAADE----YMLDHLKQLCETAL 361
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A151ZK46_9MYCE (BTB domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZK46_9MYCE) HSP 1 Score: 59.7 bits (143), Expect = 1.830e-8 Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 7 AHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
AH+ +LS R A + M S M ES + IKD ++ VF+ ++ YLYTD+L ++ + I++L++ A++ Y LD L +LCE L
Sbjct: 218 AHKNILSSRCAKFKGMFSSEMVESTKKEIEIKDHKAPVFRKMIEYLYTDSLNEDNIEMILQLIIIADE----YILDSLKSLCESKL 299
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A6J8AVD7_MYTCO (BTBD3_6 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AVD7_MYTCO) HSP 1 Score: 58.9 bits (141), Expect = 3.540e-8 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 LPAHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
+PAH+M+L+LRS +AM +S D+ I+DI + FQ+L+ YLYTD LQL S D ++ LL AA + Y + L++ CE L
Sbjct: 69 IPAHKMILALRSPVFKAMFYGSFPQSEGDI-RIEDICLNTFQTLMRYLYTDDLQL-SKDSVIPLLYAAKK----YQIAGLISKCETYL 150
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: UPI001F5C91F8 (BTB/POZ and MATH domain-containing protein 2-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C91F8) HSP 1 Score: 58.5 bits (140), Expect = 4.540e-8 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 1 LPAHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDI---------MELLVAANQASLQYTLDDLVALCEGLL 264
LPAH++VL++RS +A+L M+E S+ V I D++ ++F+ LL ++YTD+L + +DD+ LLVAA++ Y ++ L +CE +L
Sbjct: 190 LPAHKLVLAMRSRVFKALLYGPMKEKDSNRVIIDDMQPAIFKVLLHFIYTDSLPPKMNDDLEGDDKKEVTRHLLVAADR----YAMERLKLMCENIL 282
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A833R049_9POAL (BTB/POZ and MATH domain-containing protein 1-like isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R049_9POAL) HSP 1 Score: 58.2 bits (139), Expect = 6.240e-8 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 1 LPAHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTL-QLESSDDI-----------MELLVAANQASLQYTLDDLVALCEGLL 264
L AHR VL++RSA A L M+E ++D +T++DI +SVF+S+L ++Y+D+L E + D+ LLVAA++ Y L+ L +CE LL
Sbjct: 200 LKAHRCVLAVRSAVFNAELFGCMKEKWADTITVEDIETSVFKSMLYFIYSDSLPDFEVTTDVDSEKQDMRLMSQHLLVAADR----YQLERLRLMCEDLL 295
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A8B6BEB6_MYTGA (BTB/POZ domain-containing protein 9 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BEB6_MYTGA) HSP 1 Score: 56.2 bits (134), Expect = 3.150e-7 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 LPAHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
+PAH+M+L+LRS +AM +S D+ +I+DI + F+ L+ YLYTD LQL + D ++ LL AA + Y + L++ CE L
Sbjct: 64 IPAHKMILALRSPVFKAMFYGSFPQSEGDI-SIEDISLNTFKRLMGYLYTDHLQL-TKDSVIALLYAAKK----YQIAGLISKCETYL 145
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A2K2CPY1_BRADI (Uncharacterized protein (Fragment) n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2CPY1_BRADI) HSP 1 Score: 55.8 bits (133), Expect = 3.910e-7 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 PAHRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
PAHR VL+ RS+ +A L GM+E + I D+ S VF+SLL +LYTD+L + LLVAA++ Y ++ L +CE L
Sbjct: 159 PAHRCVLAARSSVFKAELFGGMKEKTGGSIKIDDMESDVFESLLHFLYTDSLPTTTMGG--HLLVAADR----YNIERLKLICEDRL 239
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Match: A0A7S3UHP4_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3UHP4_OXYMA) HSP 1 Score: 55.5 bits (132), Expect = 4.760e-7 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 10 HRMVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLESSDDIMELLVAANQASLQYTLDDLVALCEGLL 264
H+++LSL S PL AML S MRE+ + VV I DI ++VF+ LL Y+Y + + S D++ ++L AA + Y + LV C +L
Sbjct: 20 HKIILSLSSEPLAAMLNSSMREATTGVVEISDIDAAVFEILLRYMYGCEISIVS-DNVFDVLEAAKK----YDVIKLVDRCASVL 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17090.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17090.1.1 >prot_P-wetherbeei_contig17090.1.1 ID=prot_P-wetherbeei_contig17090.1.1|Name=mRNA_P-wetherbeei_contig17090.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp MVLSLRSAPLRAMLQSGMRESFSDVVTIKDIRSSVFQSLLTYLYTDTLQLback to top mRNA from alignment at P-wetherbeei_contig17090:503..1339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17090.1.1 ID=mRNA_P-wetherbeei_contig17090.1.1|Name=mRNA_P-wetherbeei_contig17090.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig17090:503..1339+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17090:503..1339+ >mRNA_P-wetherbeei_contig17090.1.1 ID=mRNA_P-wetherbeei_contig17090.1.1|Name=mRNA_P-wetherbeei_contig17090.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig17090:503..1339+ (Phaeothamnion wetherbeei SAG_119_79)back to top |