mRNA_P-wetherbeei_contig17080.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: A0A6C2D7F0_9RHOO (Efflux RND transporter permease subunit n=6 Tax=Betaproteobacteria TaxID=28216 RepID=A0A6C2D7F0_9RHOO) HSP 1 Score: 492 bits (1267), Expect = 1.250e-160 Identity = 255/485 (52.58%), Postives = 336/485 (69.28%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHAL--HATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+R YA + DK TV+A NE+G+PTNLAT AV+ VF SL +V+GM G YF+P+ F+VPVAM SLL AY + PWAA RWL GH L H T + + Y L+ PL+D RR ++ AL + + WQF+RP G+ P +++ + +MPKDD NTFNIT LPE TPVE T R+A E+ LR++P ++DYQ ++G GV DF+GLLRG +++GPH+GE+RVNL DK +R S DIVR LRP +QAIAAR+PGST+QL+EDPPGPP R T+LAEIYG DP ++ ++ V+ F YDM EVTDT D+YQHR+ VDR+KAALSG++ A A AL+ L G +GRAH+ E+NPVPIRL PR + + P + R+S+ N G R+ LSE+ + D PIL K+ E V+FVGGEL+ ++P+YAVL+LD+RLDG +ADG RLVTGN+R P
Sbjct: 418 GLLVDAAIVVIENIHRRYARLGQEDKARATVQAVNEIGSPTNLATLAVMLVFGSLLIVSGMTGQYFYPVAFNVPVAMAASLLVAYAVVPWAANRWL--KPGEGHDLEDHDTGDRLHRFYHALMAPLVDRPPRRRGVFLLAALAIVLSLFQAAWQFVRPAGLSGPQAWFGVEMAMMPKDDKNTFNITFDLPETTPVETTDRLAREIGALLRQNPDVSDYQSWIGQAGVIDFNGLLRGAGSKQGPHVGEVRVNLRDKTARDKTSIDIVRELRPAVQAIAARFPGSTVQLVEDPPGPPVRATVLAEIYGTDPQQLRALSGQVKAAFGQTYDMVEVTDTEVEDVYQHRLTVDREKAALSGLTVAEVAVALRRLIDGEALGRAHVQGEKNPVPIRLQIPRSHQIDPELLTRVSLTNRQGQRVPLSELVQVAPARADRPILHKDGERVTFVGGELESTAPVYAVLDLDRRLDGLALADGSRLVTGNLRFKP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: UPI0007852743 (efflux RND transporter permease subunit n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=UPI0007852743) HSP 1 Score: 491 bits (1264), Expect = 3.840e-160 Identity = 248/485 (51.13%), Postives = 340/485 (70.10%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHAL--HATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+RHY+ + +K +TV+AANE+GNPTNLAT AV+ VF SL VV+GM G YF+P+ FSVPVAM SLL AY + PWA RWL GH L H + + Y ++ PL+D R R+ ++ L +A + P WQF+RP G+ P +++ + +MPKD+ NTFNIT+ +PE TP E+T R+A E+ LR++P + DYQ ++G G+ DF+GLLRG + GPH+GEIRVNL DK +R+ S DIVR LRP +QAIAAR+PGST+QL+EDPPGPP R T++AEIYG DP ++ ++A V+ F+ YDM EV D+ D+Y+HR++VDR+KAALSG++ A A AL+ L G +GRAH+ E+NPVPIRL PRR+ + PA + ++S+ N G ++ LSE+ R + D PI K+ E VS+VGGEL+ ++P+YAVL+LD+RLDG + DG L TGN+RL P
Sbjct: 418 GLLVDAAIVVIENIHRHYSRLGDKNKCLVTVQAANEIGNPTNLATLAVMLVFGSLLVVSGMPGQYFYPVAFSVPVAMAASLLVAYSIVPWATNRWL--KPGEGHELEDHDAGDRLHRFYHAVMAPLVDSPRRRQRVFLLAGLAIALSLFQPAWQFVRPAGLSGPQAWFGVEMAMMPKDNKNTFNITIDMPETTPAEVTDRLAREIGALLRQNPYVRDYQSWIGEAGIIDFNGLLRGAGGKAGPHVGEIRVNLVDKAARSKTSIDIVRELRPAVQAIAARFPGSTVQLVEDPPGPPVRATVMAEIYGKDPQQLRALSAQVKAAFQQTYDMVEVNDSEGEDVYEHRLVVDREKAALSGITSAEVAVALRRLIDGEEMGRAHIRGEKNPVPIRLQIPRRHQIDPALLSQVSLTNRQGQQVPLSELVRVIPAWADRPIQHKDGERVSYVGGELETTAPVYAVLDLDRRLDGLALTDGSHLTTGNLRLNP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: A0A349W7G1_9BURK (AcrB/AcrD/AcrF family protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A349W7G1_9BURK) HSP 1 Score: 490 bits (1261), Expect = 9.960e-160 Identity = 257/485 (52.99%), Postives = 339/485 (69.90%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHAL--HATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+R+Y+ + DKR +TV+A NE+GNPTNLAT AV+ VF SL VV+GM G YF+P+ F+VP+AM SLL AY + PWAA RWL GH L H T + + YR ++ PL+D+ R RR+ + AL +A + L P WQF+RP G+ P S++ + +MPKD+ NTFNITL LPE TPVE T R+ E+ LR+ P + DYQ ++G GV DF+G+LRG +++GPH+ EIRVNL DK R+ S IVR LRP +QA AAR+PGST+QL+EDPPGPP R T+LAEIYG D ++ ++ V F DM EVTD+ P D+ QHR+ VDR+KAALSG+S A AL+ L G +GRA +A E+NPVPIRL PRR+ + PA + R+SV N G ++ LSE+ R L D PIL K+ E V++VGGEL+ ++P+YAVL+LD+RLDG +ADG RL TGN+RL P
Sbjct: 418 GLLVDAAIVVIENIHRNYSRLGDKDKRLVTVQATNEIGNPTNLATLAVMLVFGSLLVVSGMPGQYFYPVAFNVPIAMAASLLVAYSVVPWAANRWL--KPGEGHDLEDHNTGDRLHRFYRAVMTPLVDQPRRRRIAFALAALAIALSLLQPAWQFLRPAGLSGPQSWFGVELAMMPKDNKNTFNITLDLPETTPVETTDRLLREVGTLLRQHPEVRDYQSWIGQAGVIDFNGMLRGAGSKQGPHVAEIRVNLRDKTERSMTSIAIVRELRPALQAAAARFPGSTVQLVEDPPGPPVRATVLAEIYGQDLQQLRSLSDQVNAAFRQTRDMVEVTDSEPQDVTQHRLTVDREKAALSGLSVAEVVVALRRLIDGEEMGRARIAGEKNPVPIRLQIPRRHQIDPALLARVSVTNRQGQQVPLSELVRVAPALADRPILHKDGERVTYVGGELESTAPVYAVLDLDRRLDGLLLADGSRLTTGNLRLNP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: Q11Z83_POLSJ (Acriflavin resistance protein n=9 Tax=Burkholderiales TaxID=80840 RepID=Q11Z83_POLSJ) HSP 1 Score: 489 bits (1259), Expect = 1.930e-159 Identity = 257/485 (52.99%), Postives = 343/485 (70.72%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHALHATDTKPQ--QIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+R+Y+ + DKR +TV+A NE+GNPTNLAT AV+ VF SL VV+GM G YF+P+ F+VPVAM SLL AY + PWAA RWL + GH L DTK + + YR L+ PL+D +R R + ++ L +A + L P WQF+RP G+G P S++ + +MPKDD NTFNITL +P PVE T R A E+ LR++ + +YQ ++G GV DF+GLLRG+ N++GPH+ EIRVNL +K R+ S IVR LRP +QA+AARYPGST+QL+EDPPGPP R T+LAEIYG D ++ ++A V+ F+ DM EVTD+ D+YQ+R+ VDR+KAALSG+S A A AL+ L G +GRA +A E+NPVPIRL PRR+ + PA + R+SV N G R+ LSE+ + V D I K+ E V++VGGEL+ ++P+YAVL+LD+RLDG +ADG RL TGN+RL P
Sbjct: 418 GLLVDGAIVVIENIHRNYSRLGKQDKRLVTVQATNEIGNPTNLATLAVMLVFGSLLVVSGMPGQYFYPVAFNVPVAMAASLLVAYAVVPWAANRWLKLGE--GHDLEDHDTKDRLHRFYRHLMSPLVDRSRSRWLAFLLAGLAIAVSLLQPAWQFVRPAGLGGPQSWFGVELAMMPKDDKNTFNITLDMPATAPVEATDRFAREVGALLRENAYVRNYQSWIGEAGVIDFNGLLRGSGNKQGPHVAEIRVNLLNKADRSKTSIAIVRELRPTLQAMAARYPGSTVQLVEDPPGPPVRATVLAEIYGKDLQQLRTLSAQVKAAFQQTRDMVEVTDSEAQDVYQYRLTVDREKAALSGLSVAEVAVALRRLIDGEEMGRARIAGEKNPVPIRLQIPRRHQIDPALLARVSVTNRQGQRVPLSEVVQVVPGAVDRTISHKDGERVTYVGGELESTAPVYAVLDLDRRLDGLLLADGSRLTTGNLRLNP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: A0A7R7JC23_9GAMM (Multidrug transporter AcrB n=1 Tax=Thiohalobacter sp. COW1 TaxID=2795687 RepID=A0A7R7JC23_9GAMM) HSP 1 Score: 489 bits (1258), Expect = 2.080e-159 Identity = 256/485 (52.78%), Postives = 334/485 (68.87%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHALHATDTKPQ--QIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+R Y +K +TV A NE+G+PTNLAT AVI VF SL VV+GM G YF+P+ F+VPVAM SLL Y + PWAA RWL GH L D++ + + Y L+ PL+D RR + AL + + P WQF+RP G+ P +++ + +MPKD+ NTFNITL LP+ PVE T R+A E+ LR++P + DYQ ++G GV DF+GLLRG N++GPH+ EIRVNL DK +R S +IVR LRP +QAIAARYPGST+QLLEDPPGPP R T+LAEIYG DP ++ ++A V+ F YDM EV D+ D+Y+HR++VDR+KAALSG+S A A AL+ L G +GRAH+ E+NPVPIRL PRR+ ++P + R+S+ N G R+ LSE+ R L D PIL K+ E VSFVGGEL ++P+YAVL+LD+RLDG + DG RL TGN+RL P
Sbjct: 418 GLLVDAAIVVIENIHRRYGRLGRAEKPRVTVDAVNEIGSPTNLATLAVILVFGSLLVVSGMPGQYFYPVAFNVPVAMAASLLVGYAVVPWAANRWL--KPGEGHDLEDHDSRDRLHRYYHVLMTPLVDSPSRRRAVFALAALAIMLSLFQPAWQFVRPAGLSGPQAWFGVEMAMMPKDNKNTFNITLDLPQTAPVETTDRLAREVGALLRQNPYVTDYQSWIGQAGVIDFNGLLRGAGNKQGPHVAEIRVNLQDKTTRRVSSIEIVRALRPAVQAIAARYPGSTVQLLEDPPGPPVRATVLAEIYGKDPQQLRALSAQVKAAFRQTYDMVEVNDSEGEDVYEHRLVVDREKAALSGLSVAEVAMALRRLIDGEELGRAHVQGEKNPVPIRLQIPRRHQIAPELLSRVSLTNRQGQRVPLSELVRVTPALADRPILRKDGERVSFVGGELASTAPLYAVLDLDRRLDGLLLDDGSRLTTGNLRLNP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: UPI001CF8AB50 (efflux RND transporter permease subunit n=1 Tax=Ferribacterium limneticum TaxID=76259 RepID=UPI001CF8AB50) HSP 1 Score: 473 bits (1216), Expect = 4.950e-153 Identity = 245/483 (50.72%), Postives = 333/483 (68.94%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT-SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHALHATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRLIP 1446
G+LVD AIVV+ENI+R YA EGDK TV+A NE+G+PTNLAT A+I VF SL VV GM+G YF+PI F+VPVAM SLLAAY + PWAA RWL H + + ++Y + P++D R+RR +++ L + + + WQF+RP GVG +++ + +MPKDD NTFNIT+ LPE P+E T R+A E+ LR++P + DYQ ++G GV DF+GLLRG N+ GP++ EIRVNL DK +R+ S D+VR LRP QAIA R+PGST+Q +EDPPGPP R T++AEIYG D ++ +++ V+ EF + YDM EVTD+ D+ Q+R+ VDR+KAALSG+S A A AL+ L G +G AH+ E+N +PIRL PRRY + P + +IS+ N G R+ LSE+ R + D PIL K+ E V+FVGGEL+ ++P+YAVL+LD+RLDG ++DG RL TGN+R P
Sbjct: 418 GLLVDAAIVVIENIHRCYARLGEGDKLRTTVQAVNEIGSPTNLATLAIILVFGSLLVVGGMSGQYFYPIAFNVPVAMAASLLAAYAVVPWAAHRWLKPGEGHDLEAHNSQGRLHRLYHWGMAPIMDNPRHRRRAFMLVILAIILSLMQLAWQFVRPGGVGGGVAWLGVEMSMMPKDDKNTFNITMDLPETVPLETTDRLAREIGTLLRQNPYVRDYQSWIGGAGVIDFNGLLRGAGNKAGPYVAEIRVNLLDKMARSKTSIDMVRELRPAAQAIAKRFPGSTVQFVEDPPGPPVRATVMAEIYGKDLQQLRILSDKVKGEFANTYDMVEVTDSQMEDVPQYRLTVDREKAALSGLSVAEVAIALRRLIDGEELGHAHVLGEKNIIPIRLQIPRRYQIDPTMLSQISLSNRQGQRVPLSEVVRVIPASADRPILHKDGERVTFVGGELETTAPVYAVLDLDRRLDGLVLSDGSRLATGNLRFNP 900
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: UPI001AE16F0B (efflux RND transporter permease subunit n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001AE16F0B) HSP 1 Score: 460 bits (1183), Expect = 4.270e-148 Identity = 241/487 (49.49%), Postives = 329/487 (67.56%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYATSEG--DKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWL---PVNANGGHALHATDTKP---QQIYRRLLMPLLDEARYR-RMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNM 1434
G+LVD AIVV+ENI+RHY T++ DK+ +T+ A NE+GN TNLATFAV+ VF++L +VTGM GDYF+PI F+VP+AMG S++ AYI+ PWAA RWL V H A+ +P +++Y RL PL R GLV++A++LA + + WQF+RP GVG S+ + G +PKD+ NTFNI +++PENTPVE T R E++ L K+P + +YQ +VG GV DF+GL +G R G H+ EIRVNL+DK+ R+ S DIVR RP ++AI A YPG+ + L+EDPPGPP R T+LAE+YGPD + ++A VRK FE YD ++TDT P D+ +HR+ D++KAALS +S A A AL ++GG + RAHLA+E+NPV +R PRRYAV P +++R+ V N G + LSE+ R V T D PI ++NE V+FVG EL + P YAVL+L +RL+ DG L TGN+
Sbjct: 418 GLLVDAAIVVIENIHRHYGTAKAGADKQAITILATNEIGNATNLATFAVMLVFAALFLVTGMAGDYFYPIAFNVPIAMGASVVVAYIVTPWAANRWLHRHDVQEEDAHEQEASHGQPGRMERLYLRLFRPLQQSRSVRIGFGLVIVAMMLASS-MQGAWQFVRPSGVGGASSYLGVPIGFLPKDNKNTFNIVVSMPENTPVEQTDRFVREISVQLSKEPEVVNYQTWVGQAGVEDFNGLFKGTAGRTGNHVAEIRVNLTDKHHRSKSSIDIVREFRPKVEAIRAAYPGAKISLVEDPPGPPLRSTVLAELYGPDDEGLRTLSAQVRKAFEETYDTVDITDTEPVDVLEHRIEPDKEKAALSRISTAQIAEALILVYGGNTLSRAHLADERNPVAVRAFVPRRYAVDPTRLDRVFVNNSDGNPVPLSELVRIVPTAADRPIFHRDNEKVTFVGAELSSTVPFYAVLDLQKRLNAITAPDGQPLRTGNL 903
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: UPI0011295559 (efflux RND transporter permease subunit n=1 Tax=Paracoccus sp. FO-3 TaxID=1335059 RepID=UPI0011295559) HSP 1 Score: 458 bits (1178), Expect = 2.240e-147 Identity = 237/488 (48.57%), Postives = 324/488 (66.39%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYATSEGD--KRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWL------PVNANGGHALHATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRL 1440
G+LVD AIVV+ENI+RHY + D K TV A NE+GN TNLATFAV+ VF++L +VTGM GDYF+PI ++VP+AM S++ AYI+ PW A RWL +A+ A H + +++Y RL+ PL D R ++ +L+ + + WQF+RP GVG P+S + G +PKDD NTFNI +A+PE PVE T R+ E+ L +D + +YQ +VG V+DF+GL +G R G H+ EIRVNL+DK+ R S DIVR +RP + AI YPG+T+ L+EDPPGPP R T+LAEIYGPDP + +++A VR+ F+ YDM +++DT P D+ +HR+I D++KAALSGVS A A L ++GG V+ RAHL +E+N VP+R+ PRR+AV P +++RI V N+ G + LSE+ R D PI ++NE V+FVGGEL S P+YAVL+L RLDG DG L TGN+ L
Sbjct: 417 GLLVDAAIVVIENIHRHYGSGRADIDKEQATVLATNEIGNATNLATFAVMLVFAALFMVTGMAGDYFYPIAYNVPIAMLASVVVAYIVTPWTANRWLHRHEVKESDAHAEEAKHGRHGRMERLYLRLIRPLQDRPTARLGFAALIVVLMTASVMQGAWQFVRPAGVGGPVSALGVNIGFLPKDDKNTFNIVIAMPETAPVEDTDRLVREIGTLLAEDHNVLNYQTWVGQASVADFNGLFKGTSERNGSHVAEIRVNLTDKHHRKRSSIDIVREMRPKVNAIRQGYPGATVLLVEDPPGPPLRSTVLAEIYGPDPEGLRMLSAQVREAFQETYDMVDISDTEPVDVSEHRIIPDKEKAALSGVSTAQIAQTLTMIYGGNVLSRAHLVDEKNAVPVRVFVPRRHAVDPERLDRIFVTNVAGQPVPLSELVRIEPGQSDRPIQRRDNEKVTFVGGELSDSVPLYAVLDLQNRLDGITAPDGRPLRTGNLGL 904
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: A0A256GCN6_9HYPH (AcrB/AcrD/AcrF family protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A256GCN6_9HYPH) HSP 1 Score: 458 bits (1178), Expect = 2.340e-147 Identity = 242/487 (49.69%), Postives = 329/487 (67.56%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYAT--SEGDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLP---VNANGGHALHATDTKP---QQIYRRLLMPLLDEARYRRMGLVVL-ALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNM 1434
G+LVD AIVV+ENI+RHY + S K TV A NE+GN TNLATFAV+ VFS+L +V+GM GDYF+PI ++VP+AM S++ AYI+ PWAA RWL V H + +P ++ Y RL+ PL E R R+G VL A+L G+ + WQF+RP GVG P+S++ + G +PKD+ NTFNI +A+PE TPVE T R E+ L KD + +YQ +VG G++DF+GL +G NR G + EIRVNL+DK+ R S DIVR LRP ++ I RYPG+ L+EDPPGPP R T+LAE+YGPDP + ++ VRK FE YDM +++DT D+ +HR++ D++KAALS +S A A AL ++GG + RAHLA+E+NPVP+R+ PRRYAV PA+++R+ V N G + LSE+ + V + D PI ++NE V+FVGGEL S P+YAVL+L +RL+G DG L TGN+
Sbjct: 418 GLLVDAAIVVIENIHRHYGSKQSRASKEKTTVLATNEIGNATNLATFAVMLVFSALFLVSGMAGDYFYPIAYNVPIAMAASVVVAYIVTPWAANRWLSRHTVQEADEHEQEESHGEPGRLEKFYLRLIAPL-QERRAARIGFAVLIAVLTTGSIMQGAWQFVRPSGVGGPVSWFGVNIGFLPKDNKNTFNIVIAMPETTPVEETDRFVREIGVLLSKDKNVVNYQGWVGQAGIADFNGLFKGTTNREGNSVAEIRVNLTDKHDRKESSIDIVRELRPKVEEIRRRYPGAEAALVEDPPGPPLRATVLAELYGPDPEGLRQLSTEVRKAFEETYDMVDLSDTESEDVTEHRIVPDKEKAALSKISTAQIAQALTIIYGGNELSRAHLADERNPVPVRVYVPRRYAVDPARLDRVFVDNADGKPVPLSELVKVVPSHADRPIQHRDNEKVTFVGGELSDSVPLYAVLDLQKRLNGITAPDGRPLRTGNL 903
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Match: A0A2E5FBI8_9GAMM (Acriflavin resistance protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E5FBI8_9GAMM) HSP 1 Score: 454 bits (1169), Expect = 4.010e-146 Identity = 242/481 (50.31%), Postives = 325/481 (67.57%), Query Frame = 1
Query: 1 GMLVDDAIVVLENINRHYATSE-GDKRTLTVRAANEVGNPTNLATFAVIAVFSSLSVVTGMNGDYFHPIVFSVPVAMGVSLLAAYILAPWAALRWLPVNANGGHALHATDTKPQQIYRRLLMPLLDEARYRRMGLVVLALLLAGTFLLPVWQFIRPQGVGAPLSFWAMTFGLMPKDDTNTFNITLALPENTPVEITGRMADELAGALRKDPLIADYQIYVGMPGVSDFSGLLRGNYNRRGPHLGEIRVNLSDKNSRTPISNDIVRRLRPPMQAIAARYPGSTLQLLEDPPGPPSRITILAEIYGPDPHKVNVIAAMVRKEFESIYDMAEVTDTIPADIYQHRVIVDRDKAALSGVSPASAATALQTLFGGAVIGRAHLANEQNPVPIRLMAPRRYAVSPAQMERISVPNITGARIALSEITRTVATLEDTPILTKNNEYVSFVGGELDHSSPIYAVLELDQRLDGREVADGHRLVTGNMRL 1440
G+LVD AIVV+ENI+RHY DK +TV A NE+GNPTNLATFAV+ VF SL V+T M+G YF+PI F+VP+AM SLL AYI+ PWAA RWL H K Q Y ++ PLLD RYR + ++++ + + + L P WQFIR +GVG PLS + +MPKD+ NTFN+T+ +PE TPVE+T R+ E+ LR+ P I +YQ +VG GV DF+GLL+G N++G + E+RVNL+DK +R S DI R+LRP M++I RYPGS +Q++ED PGPP R T+LAEIYG DP K+ I+A V F++ + + EV D+ AD+ Q RVIVD++KAALSGVS A A AL+ L G +GR H+A E+ VPIRL P +Y V P + I + N G +I LSE+T+ V +D PIL K+ E V++VG EL ++P+ AV+++DQRLDG + DG +L TGN+RL
Sbjct: 418 GLLVDSAIVVIENIHRHYKNLWLKDKVDVTVTATNEIGNPTNLATFAVMVVFGSLMVITEMSGQYFYPIAFNVPIAMLASLLVAYIVTPWAANRWLKPGEGEDLETHDGGDKLHQWYYNIITPLLDNRRYRYLSIMIIIIAIVLSMLQPAWQFIRAEGVGGPLSAGGVALVMMPKDNKNTFNVTIDMPEYTPVEVTDRVVREVGDVLRETPEILNYQSWVGQTGVIDFNGLLKGASNKKGSFVAEVRVNLTDKKTREISSIDIARQLRPTMESIQQRYPGSVIQVVEDLPGPPLRATVLAEIYGKDPEKLREISAKVSDVFKNTHGVIEVHDSEFADVPQFRVIVDKEKAALSGVSVAQVAQALRRLIDGGEMGRLHIAEEKKIVPIRLHIPYQYQVDPMLLSTIFITNREGKKIPLSELTQVVNDAQDRPILHKDFERVTYVGAELTDTTPVNAVMDIDQRLDGLSIGDGEKLTTGNLRL 898 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17080.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17080.1.1 >prot_P-wetherbeei_contig17080.1.1 ID=prot_P-wetherbeei_contig17080.1.1|Name=mRNA_P-wetherbeei_contig17080.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=481bp MLVDDAIVVLENINRHYATSEGDKRTLTVRAANEVGNPTNLATFAVIAVFback to top mRNA from alignment at P-wetherbeei_contig17080:3..1448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17080.1.1 ID=mRNA_P-wetherbeei_contig17080.1.1|Name=mRNA_P-wetherbeei_contig17080.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1446bp|location=Sequence derived from alignment at P-wetherbeei_contig17080:3..1448+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17080:3..1448+ >mRNA_P-wetherbeei_contig17080.1.1 ID=mRNA_P-wetherbeei_contig17080.1.1|Name=mRNA_P-wetherbeei_contig17080.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1443bp|location=Sequence derived from alignment at P-wetherbeei_contig17080:3..1448+ (Phaeothamnion wetherbeei SAG_119_79)back to top |