mRNA_P-wetherbeei_contig1708.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1708.4.1
Unique NamemRNA_P-wetherbeei_contig1708.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: D8LE53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE53_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.750e-58
Identity = 97/189 (51.32%), Postives = 131/189 (69.31%), Query Frame = 1
Query:    1 FERASEAYAMDNPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
             +R+  A  ++   + +P N PY QQ L+SW+PLLT ++  G Y+ I ++F+ +G V+  + D V++  YQYDGD SDGD CKIT+  E L C I+F++ + I  P YV+YE+  FYQNH  YV+S    QLLGSTSTSD+ DC PL YNG+L+L PCGLIANTLFND+  + S   TM+ET IAW+SD
Sbjct:    1 MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVVELR-YQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSG-QTMEETDIAWDSD 187          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A836CGC5_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.770e-52
Identity = 89/175 (50.86%), Postives = 127/175 (72.57%), Query Frame = 1
Query:   43 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
            ++RP  +P+ QQ+L S++P+ T   + GIY+++AV F+ +G  +   + N + Y +QYDG+ +D   C+IT+ +EG +C ISF +T+ + AP+YV+YE+  FY NHR+YV S+SQDQLLGS   SD+S C+PL  NG L LSPCGLIANTLFND+I + SD   M+ETGIAW +D
Sbjct:   13 SRRPAASPFNQQQLASFSPIFTPRTITGIYLTVAVFFILLGSGLYAVNGNAQDYEFQYDGNGADSTDCEITTANEGKNCTISFTLTKDLPAPIYVYYELHNFYSNHRKYVQSFSQDQLLGSQ-ISDLSACTPLERNGDLTLSPCGLIANTLFNDIITVTSD-QVMEETGIAWNTD 185          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK)

HSP 1 Score: 166 bits (420), Expect = 8.690e-47
Identity = 91/181 (50.28%), Postives = 116/181 (64.09%), Query Frame = 1
Query:   34 NPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDD---YTMDETGIAWESD 567
            N   +RP  + + QQRLK+W P+LT   +   +  I VLF+ IG      SD V  Y  QYDGD SD   C ITS  +G  C ++FNI + +D PVY++Y++  FYQNHRRYVSS    QL GST  +D   CSPLT NGS  L+PCGL+AN+LFNDVIAL++       +DETGI W+SD
Sbjct:    6 NSQERRPEESAFKQQRLKAWKPVLTPKWVVSSFAVIGVLFIIIGIAAKVSSDAVTEYKIQYDGDSSD--PCTITSYKQGRECSLTFNIDKDMDGPVYLYYQLTNFYQNHRRYVSSRYDAQLQGSTLHADTDYCSPLTSNGSQDLNPCGLVANSLFNDVIALEASTNAAVALDETGITWDSD 184          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A7S2D039_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D039_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.800e-44
Identity = 88/186 (47.31%), Postives = 122/186 (65.59%), Query Frame = 1
Query:   31 DNPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQ--CKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGS--TSTSDVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDS---DDYTMDETGIAWESD 567
            +N  +++P +T + QQRL +W P+LT   + G +++I  LFL +G VI   SD++   I QYDG  ++  Q  CK+++   G  CQI+F   E ++AP+YV+Y+ID FYQNHR+YV+SY++DQLLG   T  SDV  CSPL  N + LLSPCG+IAN+LFND I L     D   +  T IAW SD
Sbjct:    3 ENGGSRKPADTAFRQQRLPAWQPILTPNAVIGFFLAIGTLFLILGIVIQQASDSIVEKIVQYDGSGTNSAQSDCKLSN---GGDCQITFTAPEKMEAPIYVYYQIDNFYQNHRKYVASYNEDQLLGEVYTDESDVESCSPLYKNDTSLLSPCGVIANSLFNDKITLAGSSVDGLKLKTTNIAWPSD 185          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A7S2SJE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJE9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.130e-42
Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 1
Query:   46 KRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQ--CKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTS--------DVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
            +RP +TP+ QQRL +W P+LT + +  ++++I V F+ IG  +  +SD++     QYDG D+  +   C+I S + G  CQISF   E + APVYV+Y++  ++QNHRRYV SYS++QLLG             D+ DC PL  NGS LL+PCGLIAN+LFNDVI LD     +  +G+AW SD
Sbjct:   28 RRPLDTPFRQQRLPAWKPVLTPFWVMLVFLAIGVPFVIIGTTLRSQSDDLLEMRVQYDGTDTADEYTPCRIKSSNVGAQCQISFTAREDMKAPVYVYYQLSNYFQNHRRYVKSYSEEQLLGCLGKGTRDNCGGYDIDDCEPLLRNGSTLLNPCGLIANSLFNDVIILDGP-KNIQYSGLAWPSD 210          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A6U4G101_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G101_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.240e-40
Identity = 87/193 (45.08%), Postives = 116/193 (60.10%), Query Frame = 1
Query:   43 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQ--------CKITSQD-----EGLS---CQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTS--DVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
            ++RP +T + QQRLK+W P+LT   + G ++ + ++F+ +G V+   SD V  Y  QYDG  +D D         CKIT+ D      G S   C I+ N+ + ++  VYV+YE+  FYQNHRRYV S    QL G T TS  D+ DC PL   G  +LSPCGLIAN+LFNDVI L + +  M E  IAWESD
Sbjct:   49 SRRPEDTDFKQQRLKAWQPILTPAWVIGTFLLVGIIFVPVGVVLKGLSDEVVEYKCQYDGSGADEDSSDCTISPSCKITTDDLTALSPGASPDPCNITINVDKKMEGDVYVYYELHNFYQNHRRYVKSREDAQLRGETFTSKNDLKDCLPLVEKGDTILSPCGLIANSLFNDVITLQNTEIDMAEDDIAWESD 241          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.170e-39
Identity = 76/179 (42.46%), Postives = 118/179 (65.92%), Query Frame = 1
Query:   43 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPL---TYNGSLL-LSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
            ++RP +TP+ QQR+ S+ P+L    + GI+ +I V F+ +G   ++ES+ V  +  +YDGD  D + CKIT +++G +C +   + E +  P+YV+YE++ ++QNHRRYV S S  QLLG     D  +C PL   T +G +L L+PCGLIAN++FND+I L ++  TM E  I+W+SD
Sbjct:   28 SRRPKDTPFRQQRVTSFLPILQPLLVVGIFFAIGVAFIPLGKWFIEESEEVVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPD-ENCEPLERTTVDGEILDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSD 205          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A7R9U6E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E4_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.600e-38
Identity = 83/191 (43.46%), Postives = 116/191 (60.73%), Query Frame = 1
Query:   43 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQ-------CKI-TSQDEGLS------CQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGS--TSTSDVSDCSPLTYNGSLLLSPCGLIANTLFNDVIALDSDDYTMDETGIAWESD 567
            ++RP +T + QQRLK+W P+LT   + G ++ + ++F+ +G V+ + SD V  +  QYDG+ +           CKI T Q E L       C I+ ++ E ++A V+V+YE+  FYQNHRRYV S    QL G   TS SD+ DC PL   G  +LSPCGLIAN+LFNDVI L + D  M E  I+W+SD
Sbjct:   12 SRRPDDTDFKQQRLKAWQPILTPRWVIGTFLVVGIIFVPVGVVLKNLSDEVVEFKCQYDGEGAGNSSSCTIEPSCKISTEQLEALGDTAPDPCYITIDVDEKMEADVFVYYELHNFYQNHRRYVKSREDAQLRGEVFTSESDLQDCLPLVEKGDTVLSPCGLIANSLFNDVITLTNSDVEMREDDISWQSD 202          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: W2NTE7_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2NTE7_PHYPR)

HSP 1 Score: 141 bits (355), Expect = 5.800e-37
Identity = 88/227 (38.77%), Postives = 125/227 (55.07%), Query Frame = 1
Query:   43 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDD--------SDGDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPLTYNGSLL-------------------LSPCGLIANTLFNDVIALD-----------SDDYT-------MDETGIAWESD 567
            +++P +TP+ QQ+LK+W P+LT   + G +  + ++F+ IG V+  ESDNV  Y  QYDGDD          G  C ++ + EG S       C+I+F I + + APVY++Y++D FYQNHRRYV S S  QL G   T+  SDCSPLT  G+ +                   L PCGLIAN+LFND+  ++           +D Y        +D+TGIAW+SD
Sbjct:    5 SRKPEDTPFKQQKLKAWQPILTPNWVIGTFAVVGLIFIPIGIVLHTESDNVVEYSIQYDGDDMTSSSNIVDQGSGCYLSDESEGDSFDVEEHGCRITFKIEKEMKAPVYLYYQLDNFYQNHRRYVQSRSDAQLRGDA-TASTSDCSPLTTTGTGMYKYNSTAETAIGNNETDYTLMPCGLIANSLFNDIFWVNKLVTNGRTYYQNDTYEGKTLVNLVDQTGIAWKSD 230          
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Match: A0A7S3H696_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H696_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.700e-36
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   28 MDNPY-AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRRYVSSYSQDQLLGST-STSDV-SDCSPLTYNGSLLLSPCGLIANTLFNDVIALDS-----DDYTMDETGIAWESD 567
            M+ P  + RPP+  + QQ+LK+W P++T  K+  I+++I V F+  G  +++ S+ +      YDG +     C I+ Q+EG  C ++FN  E  D P+YV+YE++ FYQNHRRYVSS    QL G   S +D+ + C     NGS L++PCGLIAN+LF DV  LD+        +MD + IAW SD
Sbjct:    1 MEQPVQSNRPPSDDFRQQKLKAWQPIMTPLKVVAIFVAIGVAFIPTGVSLMNSSNAIYEKRIMYDGSNQ-AVSCSISDQNEGKVCSLTFNFDEDADGPIYVYYELENFYQNHRRYVSSRDSLQLAGEAISKADLQTTCESFINNGSQLINPCGLIANSLFTDVFTLDNAASNPSTVSMDSSEIAWASD 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1708.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE53_ECTSI3.750e-5851.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGC5_9STRA4.770e-5250.86CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9FRN7_HETAK8.690e-4750.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2D039_9STRA4.800e-4447.31Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2SJE9_9STRA2.130e-4245.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4G101_9STRA1.240e-4045.08Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6H5JEE3_9PHAE3.170e-3942.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U6E4_9STRA3.600e-3843.46Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W2NTE7_PHYPR5.800e-3738.77Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A7S3H696_9STRA1.700e-3641.49Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1708contigP-wetherbeei_contig1708:5452..6435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LE53
Preferred nameTMEM30B
PFAMsCDC50
Model size567
Max annot lvl2759|Eukaryota
KEGG koko:K08817
Hectar predicted targeting categorysignal anchor
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006869,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0010008,GO:0010570,GO:0010720,GO:0010876,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015247,GO:0015605,GO:0015711,GO:0015748,GO:0015833,GO:0015893,GO:0015914,GO:0015917,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022857,GO:0023052,GO:0030141,GO:0030154,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031344,GO:0031346,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034204,GO:0034220,GO:0034613,GO:0035577,GO:0035579,GO:0036010,GO:0036230,GO:0040008,GO:0042119,GO:0042221,GO:0042493,GO:0042581,GO:0042582,GO:0042623,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043492,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045332,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0051960,GO:0051962,GO:0055085,GO:0060284,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070861,GO:0070863,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090087,GO:0090316,GO:0097035,GO:0097708,GO:0098588,GO:0098656,GO:0098657,GO:0098791,GO:0098805,GO:0098852,GO:0099503,GO:0120035,GO:1902494,GO:1903827,GO:1903829,GO:1904949,GO:1904951,GO:1990351,GO:1990530,GO:1990531,GO:2000026
Exons2
Evalue6.95e-58
EggNOG OGsCOG5035@1|root,KOG2952@2759|Eukaryota
Ec32 ortholog descriptionCDC50/LEM3 family
Ec32 orthologEc-00_000980.1
EC2.7.11.22
Descriptionaminophospholipid transmembrane transporter activity
Cds size540
COG categoryDKT
BRITEko00000,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.1261752-UTR-P-wetherbeei_contig1708:5451..54781683186107.1261752-UTR-P-wetherbeei_contig1708:5451..5478Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1708 5452..5478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.1353376-CDS-P-wetherbeei_contig1708:5478..58161683186107.1353376-CDS-P-wetherbeei_contig1708:5478..5816Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1708 5479..5816 +
1683186107.1428945-CDS-P-wetherbeei_contig1708:6233..64351683186107.1428945-CDS-P-wetherbeei_contig1708:6233..6435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1708 6234..6435 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1708.4.1prot_P-wetherbeei_contig1708.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1708 5479..6435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1708.4.1

>prot_P-wetherbeei_contig1708.4.1 ID=prot_P-wetherbeei_contig1708.4.1|Name=mRNA_P-wetherbeei_contig1708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MDNPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVIL
DESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYV
FYEIDKFYQNHRRYVSSYSQDQLLGSTSTSDVSDCSPLTYNGSLLLSPCG
LIANTLFNDVIALDSDDYTMDETGIAWESD
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mRNA from alignment at P-wetherbeei_contig1708:5452..6435+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1708.4.1 ID=mRNA_P-wetherbeei_contig1708.4.1|Name=mRNA_P-wetherbeei_contig1708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:5452..6435+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGAACGTGCAAGCGAGGCGTACGCCATGGATAATCCGTACGCAAAGCG GCCGCCGAACACGCCGTACGCACAGCAGCGATTAAAGTCATGGACGCCGC TTCTCACCTCGTACAAGTTGGCCGGCATTTACATGTCGATTGCCGTCCTC TTCCTCACGATCGGCTTCGTCATCTTGGATGAGAGCGACAACGTAAAGAT GTACATCTACCAATACGACGGCGATGACAGCGACGGGGACCAATGTAAGA TCACGTCGCAAGATGAGGGCTTGTCCTGCCAAATAAGCTTCAACATCACC GAGACAATCGATGCGCCCGTTTACGTCTTTTACGAGATCGACAAGTTTTA CCAAAATCATAGAAGGTGAGGACTGGTGGCGAGGGGTTGCAACGCCGGTG CGCGAGTTTCTCTTTCCAACTCGATGCTGTGTCGCCGTGACGGTGCGTTC AATCGGCAGCTTGAAAGAATGAGCATTGCGCACACTTCACAGCAGTGTCT CTATTTATTGCTCCTCTCTGCTGCGTCATCTTACGCTCCTTGGACAAGAT TCGTTCGCCCCAGCCTGGTTTATCCCCTGTGCATCTTCTGCTCCTTCGAG ACTCGTCCAGCGGCCCGTGTTATCCCTCGTTCCTGAGGCTCGACTCCGCT CCTTCGCCGAGTACCTGAAGGAGCACGCAAGAAAAAGCAGCGTTCCTCTC CTTTCCCCCTCAACCTGGCTAATGCCATCCTCTGCCTCTCCATCTTCCCC CGCGACACCTTTGATCGCCACCACCGCGCCAGGTACGTGTCGTCGTACAG CCAGGATCAGCTGCTCGGGTCGACGTCGACGTCCGACGTGTCGGACTGCT CGCCGCTGACGTACAACGGCAGCCTGCTGTTGAGCCCCTGCGGTCTCATC GCCAACACGCTCTTCAACGACGTCATCGCCCTCGACAGCGACGACTACAC GATGGACGAGACGGGTATTGCATGGGAGTCGGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1708:5452..6435+

>mRNA_P-wetherbeei_contig1708.4.1 ID=mRNA_P-wetherbeei_contig1708.4.1|Name=mRNA_P-wetherbeei_contig1708.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:5452..6435+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATAATCCGTACGCAAAGCGGCCGCCGAACACGCCGTACGCACAGCA
GCGATTAAAGTCATGGACGCCGCTTCTCACCTCGTACAAGTTGGCCGGCA
TTTACATGTCGATTGCCGTCCTCTTCCTCACGATCGGCTTCGTCATCTTG
GATGAGAGCGACAACGTAAAGATGTACATCTACCAATACGACGGCGATGA
CAGCGACGGGGACCAATGTAAGATCACGTCGCAAGATGAGGGCTTGTCCT
GCCAAATAAGCTTCAACATCACCGAGACAATCGATGCGCCCGTTTACGTC
TTTTACGAGATCGACAAGTTTTACCAAAATCATAGAAGGTACGTGTCGTC
GTACAGCCAGGATCAGCTGCTCGGGTCGACGTCGACGTCCGACGTGTCGG
ACTGCTCGCCGCTGACGTACAACGGCAGCCTGCTGTTGAGCCCCTGCGGT
CTCATCGCCAACACGCTCTTCAACGACGTCATCGCCCTCGACAGCGACGA
CTACACGATGGACGAGACGGGTATTGCATGGGAGTCGGAT
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