mRNA_P-wetherbeei_contig1705.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1705.4.2
Unique NamemRNA_P-wetherbeei_contig1705.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A836CC41_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC41_9STRA)

HSP 1 Score: 307 bits (786), Expect = 9.050e-102
Identity = 153/259 (59.07%), Postives = 185/259 (71.43%), Query Frame = 1
Query:    1 FSLQGRSGGGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAY-ADGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            FS +G SGGG GA+VGTI D+ GS  KFF KS   + FDML AEY+G+KEM +T T+RVP P+C G   + ++ VFEYL MG   GA  A E GR LA+MH C S   K+GFH+DNT GATPQPN WMDSW +F+DERRLGHMLRLC + GA YP+  ELR+KV +      +LS+ +  PSL HGDLW+GNA Y ADG  CIFDP+TYYG  EVD+AM+++FG  P  FY  Y+E  P  PGHEQR  IYN+YH LNH
Sbjct:   25 FSSRG-SGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKA------VLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNH 276          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A7S2XYV3_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV3_9STRA)

HSP 1 Score: 295 bits (756), Expect = 2.320e-96
Identity = 148/252 (58.73%), Postives = 181/252 (71.83%), Query Frame = 1
Query:   22 GGGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYA-DGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GG  GAAVGT+ DA  +  ++F+KS  ++ FDML AEY+GVK M  T T+RVPEP+C+GT+  N+F+VFE+L MG   G G  A  GR+LA MHR  S N ++GF + NTCGATPQPN W  +WA+F+D  RLGHML L  R GA +P E  LR+KV      ++ILS H  VPSL HGDLWSGN AY  +G P IFDP+TYYGDREVDIAMT +FG Q  ++Y+AY +EWPL PG EQR  IYNLYH LNH
Sbjct:   97 GGXXGAAVGTVEDAA-TGKRYFYKSGSLAQFDMLRAEYMGVKAMHDTHTIRVPEPICIGTADYNSFVVFEHLPMG---GHGDPARAGRELAAMHRNLSPNGQFGFDISNTCGATPQPNPWTPTWAEFWDRHRLGHMLSLAKRDGAVFPDEERLRKKV------YDILSAHNPVPSLVHGDLWSGNQAYTKNGDPVIFDPATYYGDREVDIAMTYLFGSQASSYYQAYEQEWPLQPGFEQRKVIYNLYHILNH 338          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A6S9K0R7_HETAK (Protein-ribulosamine 3-kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K0R7_HETAK)

HSP 1 Score: 291 bits (746), Expect = 3.310e-95
Identity = 144/251 (57.37%), Postives = 175/251 (69.72%), Query Frame = 1
Query:   22 GGGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYADGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GGGGGAAVG +VD   +  ++F KSTG+ G++MLNAEY G++ MA+T T++VP P+  GTSA+NAF +FEYLN G GG     AE    LA MHRCTS + +YGFH+DNTCGATPQ N+W  +WADFY  RRL H+L+L  R GA +P   EL  KV +      IL  H   PSL HGDLWSGN  +ADG P IFDP+TYYGDREVD+AM+ +FG     FY AY   +PL PG EQR  +YNLYH LNH
Sbjct:   72 GGGGGAAVGNVVDKA-TGTRYFTKSTGLQGYNMLNAEYEGLRAMAETNTIKVPTPIAKGTSANNAFAIFEYLNFGGGGSMKQMAE---DLAAMHRCTSPDGRYGFHIDNTCGATPQDNTWEATWADFYARRRLDHILKLSERDGAHFPNRQELLDKVKA------ILQDHNAPPSLVHGDLWSGNKGFADGRPAIFDPATYYGDREVDLAMSYLFGNFGGEFYAAYEAAYPLEPGFEQRKTVYNLYHILNH 312          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A4D9CLL2_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLL2_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.160e-90
Identity = 148/256 (57.81%), Postives = 178/256 (69.53%), Query Frame = 1
Query:   25 GGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMG--RGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPR-EAELRQKVLSAGKVHEILSK--HETVPSLCHGDLWSGN-AAYADGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GGGGA  G   D    + K+F+KSTG  G DML AEY G+K M  T T+RVP PV VGTS + AF+VFEYL MG  RG  AG     GR+LA+MHR TS N ++G+ +DNT GATPQPN W  SW +F+DE+RLGHML+LC R G  + + E ELR       KV +ILS+  +   PSL HGDLW+GN AA  +GVPCIFDP+ YYGDRE D+AMT +FG   PAFY AY +EWPL PGHE+R  +YNLYH LNH
Sbjct:   44 GGGGANTGVAEDTKVGE-KYFYKSTGSWGLDMLLAEYKGIKAMYDTHTIRVPTPVAVGTSDAQAFVVFEYLAMGGTRGDAAG---RMGRELAQMHRHTSKNGQFGWDIDNTIGATPQPNGWQASWVEFWDEKRLGHMLKLCRREGHDFGQVERELR------AKVKQILSEDGYSPAPSLLHGDLWTGNVAATGEGVPCIFDPAVYYGDREADLAMTTLFGSLAPAFYTAYMDEWPLEPGHEKRKVVYNLYHILNH 289          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: W7T795_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T795_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.040e-87
Identity = 148/256 (57.81%), Postives = 177/256 (69.14%), Query Frame = 1
Query:   25 GGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMG--RGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPR-EAELRQKVLSAGKVHEILSK--HETVPSLCHGDLWSGN-AAYADGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GGGGA  G   D    + K+F+KSTG  G DML AEY G K M  T T+RVP PV VGTS + AF+VFEYL MG  RG  AG     GR+LA+MHR TS N ++G+ +DNT GATPQPN W  SW +F+DE+RLGHML+LC R G  + + E ELR       KV +ILS+  +   PSL HGDLW+GN AA  +GVPCIFDP+ YYGDRE D+AMT +FG   PAFY AY EEWPL PG+E+R  +YNLYH LNH
Sbjct:  153 GGGGANTGVAEDRKVGE-KYFYKSTGSWGLDMLLAEYKGTKAMYDTHTIRVPTPVAVGTSDAQAFVVFEYLAMGGTRGDAAG---RMGRELAQMHRHTSKNGQFGWDIDNTIGATPQPNGWQASWVEFWDEKRLGHMLKLCRREGHDFGQVERELR------AKVKQILSEDGYSPAPSLLHGDLWTGNVAATGEGVPCIFDPAVYYGDREADLAMTALFGSLAPAFYTAYMEEWPLEPGYEKRKVVYNLYHILNH 398          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A0G4H7A3_VITBC (Protein-ribulosamine 3-kinase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H7A3_VITBC)

HSP 1 Score: 265 bits (677), Expect = 1.860e-84
Identity = 135/241 (56.02%), Postives = 165/241 (68.46%), Query Frame = 1
Query:   37 AAVGTIVDAGGSDAKFFFKSTGI-SGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGT---SASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAY-ADGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQ 744
            A+VG IVD   +  K+F+KS G  +   ML AEY GVK+MA T T++VP+P+C GT     S +F++FE LNMGR GG   A   G  LA MHR  S N K+G+H+DNT GATPQPN W D+W DF+DE RLGHMLRL         +E +LR       KV +ILSKH   PSL HGDLW+GNA Y +DG P IFDP+TYYGDREVDIAM+Q+FGR    FY+AY+E WPLPPGH+ R +
Sbjct:  116 ASVGIIVDKS-TGTKYFYKSAGSGASAQMLEAEYKGVKDMADTKTIKVPDPICYGTFGNGGSRSFVIFEQLNMGRSGGGENARRMGTNLANMHRSLSPNAKFGWHMDNTIGATPQPNQWCDTWVDFWDEHRLGHMLRLA--NIIDSDKERKLR------AKVKDILSKHTCQPSLVHGDLWTGNAGYLSDGTPVIFDPATYYGDREVDIAMSQLFGRLSGEFYKAYDEAWPLPPGHQTRKE 347          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: D8LBJ1_ECTSI (Protein-ribulosamine 3-kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ1_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 9.990e-83
Identity = 129/248 (52.02%), Postives = 159/248 (64.11%), Query Frame = 1
Query:   37 AAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYA--DGVPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            A+VGTI D    D K+F+K  G SG  ML AE  G++ M +   +RVP P+C G      F +FE+LNMG    +  A   G QLA+MHR  S N KYGFH+DNT GAT QPN WMDSWADF+ ERRL HM+RL  R G  +    ++ +K  S      IL+KHE  P L HGDLW GN  +   +  P IFDP+TYYGDREVD+ MT +FG  PPAFY  Y +EWPLP GH++R  +YN+YH LNH
Sbjct:   33 ASVGTIDDLETGD-KYFYKKAGPSGASMLEAERAGLQAMYEAKAIRVPRPICGGDRPGGCFAIFEHLNMGGRASSERAELMGAQLAQMHRSLSPNGKYGFHVDNTIGATAQPNGWMDSWADFWVERRLLHMIRLSEREGGVFQNVDKVVEKTRS------ILAKHEVQPCLVHGDLWGGNQGFVAPESDPVIFDPATYYGDREVDLGMTHVFGGFPPAFYRGYEKEWPLPEGHQERQVVYNVYHILNH 273          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A7S1UAG2_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAG2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.600e-81
Identity = 140/261 (53.64%), Postives = 174/261 (66.67%), Query Frame = 1
Query:   13 GRSG--GGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEM-AKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYA--DGV--PCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GRSG  GGGGA+VG+++D   S  ++F KS G++ F+MLNAE+ G+ +M A    +RVP P+ VGT  SNAF VFEYL+   GGG G   E G +LA+MHR TS + +YG+ +DNT GATPQPN WMD+WA+F+ ERRL HML+L    G        +  + L A K +++L  H+  PS+ HGDLW GNA Y   DG   P IFDP+TYYGDRE DIAMT +FG     FY  Y E W LP GHEQR  IYNLYH LNH
Sbjct:    8 GRSGAGGGGGASVGSVLDTA-SGTRYFVKSGGLNAFNMLNAEFQGITDMDAAPDGIRVPTPIAVGTGESNAFAVFEYLDF-CGGGDG--REMGARLAQMHRHTSPDGRYGWRMDNTIGATPQPNGWMDNWAEFWVERRLKHMLKLAGTAG--------MDSEALIA-KTYDLLKDHKPEPSILHGDLWGGNAGYVNVDGTVEPVIFDPATYYGDRESDIAMTYLFGGFGSDFYVGYEEAWELPEGHEQRKVIYNLYHILNH 255          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A7S2S4R8_9STRA (Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4R8_9STRA)

HSP 1 Score: 248 bits (633), Expect = 9.140e-79
Identity = 126/212 (59.43%), Postives = 156/212 (73.58%), Query Frame = 1
Query:   25 GGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNA-AYADGVPCIFDPSTYYGDREVDIAMT 657
            GGGGAAVG++VD+  S  KFF+K+TG+ GFDML AE++GVKEMA+T T+ VP P+ +GTSA+NAF VF+YL MG       +A  GR+LA MHR TS N  YG+ ++NTCGAT QPN+W + W DF+D +RLGHMLRLC R GA +  E ELR KV +  + H  +  +   PSL HGDLW+GNA A  DG PCIFDP+TYYGDREVD AMT
Sbjct:   77 GGGGAAVGSLVDSV-SGRKFFYKATGLHGFDMLRAEFLGVKEMAETGTITVPNPIVLGTSANNAFAVFDYLEMGHPKTNEVSATMGRELAAMHRATSENGLYGWRVNNTCGATLQPNTWTEEWPDFWDSQRLGHMLRLCKRDGAVFSNEQELRTKVRAMLEDH--VRTNAVQPSLVHGDLWTGNAGATKDGRPCIFDPATYYGDREVDYAMT 285          
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Match: A0A7S1D217_CYCTE (Protein-ribulosamine 3-kinase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D217_CYCTE)

HSP 1 Score: 246 bits (628), Expect = 5.200e-77
Identity = 137/256 (53.52%), Postives = 159/256 (62.11%), Query Frame = 1
Query:   25 GGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKEMAKTTTVRVPEPVCVGTSASN--AFLVFEYLNMGRGGGAGGAAEFGRQLARMHRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARGGATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYA--DG--VPCIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIYNLYHKLNH 774
            GGGGA+   ++D   ++ K+F KS     +DML AEY GVKEM  T T+RVPEP+  G +  N  AF+VFEYL   RGG      E G QLA+MHR  S N ++GFH+DNT GAT QPN W+  W  F+D  RLGHMLRL    G +      LR K        E+LS H   PSL HGDLW GN  YA  DG  VP IFDP+TYYGDRE DIAMT +FG     FYE Y  EW LP GHEQR  +YNLYH LNH
Sbjct:   97 GGGGASTSAVMDPA-TNTKYFVKSA-FGEYDMLQAEYHGVKEMHNTQTIRVPEPIAYGKADDNGRAFVVFEYLEFARGGSG---FELGVQLAKMHRHCSNNGEFGFHIDNTIGATHQPNGWIKDWPHFWDTHRLGHMLRLTDDAGYSAKEVEALRIKT------RELLS-HNPAPSLLHGDLWGGNKGYAKVDGQVVPVIFDPATYYGDREADIAMTYLFGGFGNDFYEGYESEWSLPEGHEQRRTVYNLYHILNH 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1705.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC41_9STRA9.050e-10259.07Protein-ribulosamine 3-kinase n=1 Tax=Tribonema mi... [more]
A0A7S2XYV3_9STRA2.320e-9658.73Protein-ribulosamine 3-kinase n=1 Tax=Fibrocapsa j... [more]
A0A6S9K0R7_HETAK3.310e-9557.37Protein-ribulosamine 3-kinase n=1 Tax=Heterosigma ... [more]
A0A4D9CLL2_9STRA3.160e-9057.81Protein-ribulosamine 3-kinase n=1 Tax=Nannochlorop... [more]
W7T795_9STRA1.040e-8757.81Protein-ribulosamine 3-kinase n=1 Tax=Nannochlorop... [more]
A0A0G4H7A3_VITBC1.860e-8456.02Protein-ribulosamine 3-kinase n=2 Tax=Vitrella bra... [more]
D8LBJ1_ECTSI9.990e-8352.02Protein-ribulosamine 3-kinase n=2 Tax=Ectocarpus T... [more]
A0A7S1UAG2_9STRA2.600e-8153.64Protein-ribulosamine 3-kinase n=1 Tax=Phaeomonas p... [more]
A0A7S2S4R8_9STRA9.140e-7959.43Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=R... [more]
A0A7S1D217_CYCTE5.200e-7753.52Protein-ribulosamine 3-kinase n=1 Tax=Cyclophora t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1705contigP-wetherbeei_contig1705:4069..5408 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LBJ1
PFAMsFructosamin_kin
Model size774
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.64e-83
EggNOG OGsCOG3001@1|root,KOG3021@2759|Eukaryota
Descriptionprotein-ribulosamine 3-kinase activity
Cds size774
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.2572365-CDS-P-wetherbeei_contig1705:4068..43901683186106.2572365-CDS-P-wetherbeei_contig1705:4068..4390Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1705 4069..4390 +
1683186106.2731235-CDS-P-wetherbeei_contig1705:4565..47501683186106.2731235-CDS-P-wetherbeei_contig1705:4565..4750Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1705 4566..4750 +
1683186106.2824337-CDS-P-wetherbeei_contig1705:4850..49721683186106.2824337-CDS-P-wetherbeei_contig1705:4850..4972Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1705 4851..4972 +
1683186106.2909303-CDS-P-wetherbeei_contig1705:5263..54081683186106.2909303-CDS-P-wetherbeei_contig1705:5263..5408Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1705 5264..5408 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1705.4.2prot_P-wetherbeei_contig1705.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1705 4069..5408 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1705.4.2

>prot_P-wetherbeei_contig1705.4.2 ID=prot_P-wetherbeei_contig1705.4.2|Name=mRNA_P-wetherbeei_contig1705.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp
FSLQGRSGGGGGAAVGTIVDAGGSDAKFFFKSTGISGFDMLNAEYVGVKE
MAKTTTVRVPEPVCVGTSASNAFLVFEYLNMGRGGGAGGAAEFGRQLARM
HRCTSANEKYGFHLDNTCGATPQPNSWMDSWADFYDERRLGHMLRLCARG
GATYPREAELRQKVLSAGKVHEILSKHETVPSLCHGDLWSGNAAYADGVP
CIFDPSTYYGDREVDIAMTQMFGRQPPAFYEAYNEEWPLPPGHEQRVQIY
NLYHKLNH
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mRNA from alignment at P-wetherbeei_contig1705:4069..5408+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1705.4.2 ID=mRNA_P-wetherbeei_contig1705.4.2|Name=mRNA_P-wetherbeei_contig1705.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1340bp|location=Sequence derived from alignment at P-wetherbeei_contig1705:4069..5408+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTCTCTGCAAGGTCGCTCGGGTGGCGGCGGAGGAGCTGCCGTCGGCAC CATTGTCGATGCCGGTGGCTCGGACGCAAAGTTCTTCTTCAAGAGCACCG GAATTTCGGGCTTCGACATGCTCAATGCAGAGTATGTCGGAGTAAAGGAA ATGGCAAAGACGACGACGGTTAGAGTCCCGGAGCCTGTCTGCGTCGGAAC GTCGGCGAGCAACGCCTTCCTCGTATTCGAGTATTTGAACATGGGTCGCG GCGGCGGGGCTGGCGGGGCGGCGGAGTTCGGCCGCCAGCTCGCACGTATG CACCGCTGCACTTCCGCCAACGGTGAGTGGGCTTGAAGCAGAGGTAAGGC GAGCTAATTCAGACCATTCAGTTGGCCTCCAATTCTGTAACGCATACAGC TGGAAGTCTAGACAAAGACGAAGAAAACTCTGCGCTTACAAGAAACGTTC CACAAACTCTTCTCTTCCCGTTTTGCAATCCCACCCCGACGTCTCAGAAA AGTACGGCTTCCATCTCGACAACACCTGCGGCGCGACGCCGCAGCCCAAC AGCTGGATGGACAGCTGGGCAGACTTTTACGACGAGCGCCGACTCGGCCA CATGCTCCGTCTGTGCGCCCGGGGCGGCGCCACGTACCCACGCGAGGCAG AGCTGAGACAAAAGGTATTATCTGCCGGTAAGGTAGCAGCCTTGGTTTGC CAAGTTTCTTATGTTTTAAAGCCATTCTTGGATCGCCATGCCTCTGCGCC TTTCGCATTGTTGCTACTCTTCTTCTGGGCAGGTGCACGAGATTCTGTCC AAGCACGAGACGGTCCCGTCGCTGTGCCACGGCGACTTGTGGTCTGGCAA CGCTGCATACGCTGATGGAGTGCCTTGCATCTTCGATCCATCAACCTACT ATGGGTTAGTCTGAACCTGACCACGCCATCCTCTACCATCCTCTACCTGT TGTCACCGCGCGCTGCTTCCGCCGCCATGACATTCTTGGCGCCAGCGGCG GTAGCAGGGTCCTTTCATCCTTAGCGGCGACGGCGGGGTCTGGAAAGTGG CGACCGCGGTGACGGTTCTTGTGAGGAGGGCTTGAAGCCGTCTCGTCCTT ACAGCTTTCTGACGTTCGTTTCCCTGCTCTGATTGCCTGAAGTTTTTGGT TTGTGACATATCCGCTGGCGACCGCTGCCGTTTGTGGAAGACCAGGGACA GAGAAGTGGATATTGCCATGACCCAGATGTTCGGCCGCCAGCCGCCAGCC TTTTACGAAGCGTACAATGAGGAGTGGCCGCTGCCGCCGGGCCACGAGCA GCGAGTGCAGATCTACAACCTCTACCACAAACTGAACCAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1705:4069..5408+

>mRNA_P-wetherbeei_contig1705.4.2 ID=mRNA_P-wetherbeei_contig1705.4.2|Name=mRNA_P-wetherbeei_contig1705.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig1705:4069..5408+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTCTCTGCAAGGTCGCTCGGGTGGCGGCGGAGGAGCTGCCGTCGGCAC
CATTGTCGATGCCGGTGGCTCGGACGCAAAGTTCTTCTTCAAGAGCACCG
GAATTTCGGGCTTCGACATGCTCAATGCAGAGTATGTCGGAGTAAAGGAA
ATGGCAAAGACGACGACGGTTAGAGTCCCGGAGCCTGTCTGCGTCGGAAC
GTCGGCGAGCAACGCCTTCCTCGTATTCGAGTATTTGAACATGGGTCGCG
GCGGCGGGGCTGGCGGGGCGGCGGAGTTCGGCCGCCAGCTCGCACGTATG
CACCGCTGCACTTCCGCCAACGAAAAGTACGGCTTCCATCTCGACAACAC
CTGCGGCGCGACGCCGCAGCCCAACAGCTGGATGGACAGCTGGGCAGACT
TTTACGACGAGCGCCGACTCGGCCACATGCTCCGTCTGTGCGCCCGGGGC
GGCGCCACGTACCCACGCGAGGCAGAGCTGAGACAAAAGGTATTATCTGC
CGGTAAGGTGCACGAGATTCTGTCCAAGCACGAGACGGTCCCGTCGCTGT
GCCACGGCGACTTGTGGTCTGGCAACGCTGCATACGCTGATGGAGTGCCT
TGCATCTTCGATCCATCAACCTACTATGGGGACAGAGAAGTGGATATTGC
CATGACCCAGATGTTCGGCCGCCAGCCGCCAGCCTTTTACGAAGCGTACA
ATGAGGAGTGGCCGCTGCCGCCGGGCCACGAGCAGCGAGTGCAGATCTAC
AACCTCTACCACAAACTGAACCAT
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