mRNA_P-wetherbeei_contig17038.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17038.1.1
Unique NamemRNA_P-wetherbeei_contig17038.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A836CLH3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH3_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.050e-42
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 1
Query:    1 HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            HNLNV+NPKEIVL +IIGEGSFGRVWSGMWRSS VAVKEFVFAQAA++GGSLQR+ELIEEIVGEAA+MSFLRHPRILHLY
Sbjct:   10 HNLNVVNPKEIVLHKIIGEGSFGRVWSGMWRSSQVAVKEFVFAQAAVTGGSLQRNELIEEIVGEAAVMSFLRHPRILHLY 89          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A835Z8B5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.040e-41
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 1
Query:    4 NLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            NL+V+NP EIVL +IIGEGSFGRVWSGMWRSSPVAVKEFVFAQAA++GGSLQR+ELIEEIVGEAA+MSFLRHPRILHLY
Sbjct:   11 NLSVVNPSEIVLLKIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAVAGGSLQRTELIEEIVGEAALMSFLRHPRILHLY 89          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A6H5J8D6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D6_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.680e-38
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 1
Query:    1 HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            HNLN+INPKEI+L +IIGEGSFGRVWSG WRSS VAVKEFVFAQAAISGGS QR+ELIEEIVGEAAIMS L+HPRILHLY
Sbjct: 1060 HNLNIINPKEIMLHKIIGEGSFGRVWSGHWRSSSVAVKEFVFAQAAISGGSFQRNELIEEIVGEAAIMSVLQHPRILHLY 1139          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A7S3XPL6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL6_HETAK)

HSP 1 Score: 127 bits (319), Expect = 1.680e-33
Identity = 58/78 (74.36%), Postives = 72/78 (92.31%), Query Frame = 1
Query:    7 LNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            LN+I+P +I L+ IIGEGSFGRVW+G+WR+S VAVKEFVFAQ A+ GG+LQR+EL++EIVGEAAIMSFLRHP++LHLY
Sbjct:  111 LNIIDPNDIKLNNIIGEGSFGRVWAGVWRASKVAVKEFVFAQEALRGGALQRNELVQEIVGEAAIMSFLRHPKVLHLY 188          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A7S3M645_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M645_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.570e-33
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1
Query:    7 LNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            L +INPKEIVLS+IIGEGSFGRVWSG WR++ VAVKEFVFAQAAI GGSLQRS +IEEIVGEA IM+ LRHP+IL LY
Sbjct:  341 LLIINPKEIVLSKIIGEGSFGRVWSGHWRNNGVAVKEFVFAQAAIEGGSLQRSSIIEEIVGEAGIMACLRHPKILQLY 418          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A7S2RPC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPC6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.070e-33
Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 1
Query:    1 HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            H+L +I+P EIVL  IIGEGSFGRVWS MW+SS VAVKEFVFAQAA+SGGSL R ++IEEIVGEA IMS+LRHPRIL L+
Sbjct:  207 HSLTIIDPSEIVLHNIIGEGSFGRVWSAMWQSSQVAVKEFVFAQAAVSGGSLHRRDIIEEIVGEAGIMSYLRHPRILQLF 286          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A482SUV6_9ARCH (Protein kinase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV6_9ARCH)

HSP 1 Score: 127 bits (318), Expect = 3.080e-32
Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 1
Query:   13 VINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            +INPKEI+LSRIIGEGSFGRVWSG WR++ VAVKEFVFAQAAI+GGSLQR+ +IEEIVGEA +M+ LRHP+IL LY
Sbjct:  405 IINPKEILLSRIIGEGSFGRVWSGQWRNNAVAVKEFVFAQAAIAGGSLQRNNIIEEIVGEAGVMACLRHPKILQLY 480          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A7R9YBX3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.130e-29
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 1
Query:    4 NLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            NL V++P EIVL  +IGEGSFGRVW G WR S VAVKEFVFAQAA+ G S QR EL++EIVGEA IM+ LRHP+ILHLY
Sbjct:  674 NLPVLDPTEIVLESVIGEGSFGRVWRGTWRHSAVAVKEFVFAQAAVKGNSKQRDELLQEIVGEAGIMAMLRHPKILHLY 752          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A7S1D2K4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2K4_CYCTE)

HSP 1 Score: 111 bits (278), Expect = 7.370e-28
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query:    1 HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            H L +I+P+EI L RIIGEG+FGRVWS  WRSS VAVKEFVFAQAA++G S  + E+IEEI+GEA +M+ LRHP +L L+
Sbjct:   13 HLLTLIDPQEIFLQRIIGEGTFGRVWSAKWRSSKVAVKEFVFAQAAVAGRSKMQGEIIEEIIGEAGMMAILRHPNVLQLF 92          
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Match: A0A8J2X365_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X365_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.780e-28
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query:    1 HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGGSLQRSELIEEIVGEAAIMSFLRHPRILHLY 240
            H L +I+P EIVL  +IGEGSFGRVWS  W+SS VAVKEFV AQAA +GGSLQR +++E IVGEA IM++LRHP++L LY
Sbjct:  542 HALVLIDPAEIVLRDVIGEGSFGRVWSATWQSSEVAVKEFVLAQAAFAGGSLQRRDIVEAIVGEAGIMAYLRHPKVLQLY 621          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLH3_9STRA2.050e-4290.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z8B5_9STRA1.040e-4188.61Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5J8D6_9PHAE6.680e-3887.50Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S3XPL6_HETAK1.680e-3374.36Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3M645_9STRA5.570e-3380.77Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7S2RPC6_9STRA7.070e-3376.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SUV6_9ARCH3.080e-3278.95Protein kinase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A7R9YBX3_9STRA1.130e-2972.15Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A7S1D2K4_CYCTE7.370e-2865.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J2X365_9STRA8.780e-2867.50Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17038contigP-wetherbeei_contig17038:682..921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0R9T5
PFAMsPkinase_Tyr
Model size240
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-26
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota,2XA5R@2836|Bacillariophyta
DescriptionBelongs to the protein kinase superfamily
Cds size240
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186105.9134529-CDS-P-wetherbeei_contig17038:681..9211683186105.9134529-CDS-P-wetherbeei_contig17038:681..921Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17038 682..921 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17038.1.1prot_P-wetherbeei_contig17038.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17038 682..921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17038.1.1

>prot_P-wetherbeei_contig17038.1.1 ID=prot_P-wetherbeei_contig17038.1.1|Name=mRNA_P-wetherbeei_contig17038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
HNLNVINPKEIVLSRIIGEGSFGRVWSGMWRSSPVAVKEFVFAQAAISGG
SLQRSELIEEIVGEAAIMSFLRHPRILHLY
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mRNA from alignment at P-wetherbeei_contig17038:682..921-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17038.1.1 ID=mRNA_P-wetherbeei_contig17038.1.1|Name=mRNA_P-wetherbeei_contig17038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig17038:682..921- (Phaeothamnion wetherbeei SAG_119_79)
CACAACCTCAATGTCATCAACCCCAAGGAGATCGTGCTGAGCCGCATCAT TGGGGAGGGCTCCTTCGGCCGCGTCTGGAGCGGCATGTGGCGCAGCAGCC CCGTCGCCGTCAAGGAGTTCGTCTTCGCGCAGGCCGCCATCTCGGGCGGC TCGCTGCAGCGGTCCGAACTGATCGAGGAGATTGTGGGTGAGGCGGCCAT CATGAGCTTTTTGCGGCACCCACGCATCCTCCACCTCTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17038:682..921-

>mRNA_P-wetherbeei_contig17038.1.1 ID=mRNA_P-wetherbeei_contig17038.1.1|Name=mRNA_P-wetherbeei_contig17038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig17038:682..921- (Phaeothamnion wetherbeei SAG_119_79)
CACAACCTCAATGTCATCAACCCCAAGGAGATCGTGCTGAGCCGCATCAT
TGGGGAGGGCTCCTTCGGCCGCGTCTGGAGCGGCATGTGGCGCAGCAGCC
CCGTCGCCGTCAAGGAGTTCGTCTTCGCGCAGGCCGCCATCTCGGGCGGC
TCGCTGCAGCGGTCCGAACTGATCGAGGAGATTGTGGGTGAGGCGGCCAT
CATGAGCTTTTTGCGGCACCCACGCATCCTCCACCTCTAC
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