mRNA_P-wetherbeei_contig17019.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17019.1.1
Unique NamemRNA_P-wetherbeei_contig17019.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A6G6X2C4_9HYPH (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6X2C4_9HYPH)

HSP 1 Score: 354 bits (909), Expect = 1.150e-118
Identity = 173/283 (61.13%), Postives = 223/283 (78.80%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAKKPDPNNKDEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            F+SG  VKKG KL QLDT T++ADLKN +VQL NA+ EL R+Q + D+GFA+++  D  +  RD++ A IERT+A I QKS++APWDG+LGLR ++ G YVAPGQ ++WLQ VDPIY DF VTE ++GRI  G KV A+F A+ +  F G V+TTD+R+S  SRMITVR KL+NPDGRL+PGMYA+V V  G P  VVT+PQ+AVT+SLYGD+VF VV AK+ DPN K+  LEIERRF+K G +R+GRV + +G+KPGD++V AG NKIDQG+KV+IDNS+AL
Sbjct:   89 FDSGDLVKKGQKLFQLDTDTEQADLKNFRVQLGNAQVELDRQQALLDKGFASKSVFDTAKVLRDRMQAEIERTEALIAQKSIYAPWDGRLGLRDVAAGKYVAPGQNMIWLQSVDPIYVDFTVTESEFGRIKIGQKVKAKFAAYQNDTFNGEVSTTDARVSAESRMITVRGKLENPDGRLVPGMYADVKVIVGEPAPVVTIPQSAVTYSLYGDSVFAVVKAKEADPNAKEPDLEIERRFIKLGMVRDGRVNVVDGVKPGDQIVIAGQNKIDQGSKVRIDNSIAL 371          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A537NRX1_9PROT (Efflux RND transporter periplasmic adaptor subunit (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NRX1_9PROT)

HSP 1 Score: 345 bits (884), Expect = 1.220e-116
Identity = 170/250 (68.00%), Postives = 203/250 (81.20%), Query Frame = 1
Query:  103 NAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAKKPDPNNKDEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            NA+ EL R+QK+FD+GFAA+ADLD  R  RD+L A IERTQA I QKS++APWDG+LGLR ++VG YVA GQ ++WLQ VDPIYADF VTE D+GRI  G KV A+F+A+PD  F G VTTTD+R+S SSRMITVRAK+ N DGRL+PGMYA+V V  G PQ VVT+PQTAVT+SLYGD+VF VV AK PDPN K+  LEIERRFVK G  R GRV + +G+KPGD+VV AG NKIDQG+KV+IDNS+AL
Sbjct:    2 NAQTELDRRQKVFDKGFAAKADLDTARMLRDRLQADIERTQALIAQKSIYAPWDGRLGLRDVAVGKYVAAGQTLIWLQSVDPIYADFTVTESDFGRIKVGQKVNAKFSAYPDDSFNGEVTTTDARVSASSRMITVRAKIANADGRLVPGMYADVTVTVGEPQPVVTIPQTAVTYSLYGDSVFAVVKAKNPDPNAKEPGLEIERRFVKLGMTRGGRVNVVDGVKPGDQVVIAGQNKIDQGSKVRIDNSIAL 251          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A2W2APE1_9HYPH (Efflux transporter periplasmic adaptor subunit n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2APE1_9HYPH)

HSP 1 Score: 342 bits (878), Expect = 5.920e-114
Identity = 166/293 (56.66%), Postives = 226/293 (77.13%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAKKPDPNNKD-EQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVALRAADSATIQ 879
            FESG  V KG  LV+LDT T+EAD++++  ++ N + EL R++ +  +G  A  +LD+L+T +  L A+++R +A++ QK ++APW G++GLR I+VGSY+APGQK+VWLQ++DPIY DF VTE DY RI +G  V    NA+PD  F G + TTD+R+S+++RMI VRA++DNPD +L+PGMYANVLV+ G P+ VVTVPQTAVT+SLYGDN+FVV   K  D + KD ++L +ERRFVKAG +R+GRV I  G+K GD+VVTAG NKIDQG+KVKIDNS+AL+  D+ TIQ
Sbjct:   89 FESGQDVNKGQLLVKLDTETEEADMRSIVAEITNNDTELKRREGLVSKGVVAVTELDSLKTKQRVLQATLDRRRAEVAQKFIYAPWAGRVGLRDIAVGSYIAPGQKIVWLQQIDPIYVDFSVTESDYARIKEGQTVNVSLNAYPDQSFTGKIVTTDARLSDTNRMIMVRAEIDNPDKKLVPGMYANVLVDVGEPEKVVTVPQTAVTYSLYGDNIFVVNATKVKDKDGKDVDELVVERRFVKAGPVRDGRVSIISGIKDGDKVVTAGQNKIDQGSKVKIDNSIALKLQDTTTIQ 381          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A3C1NDW0_9HYPH (Efflux transporter periplasmic adaptor subunit n=4 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C1NDW0_9HYPH)

HSP 1 Score: 238 bits (608), Expect = 6.140e-73
Identity = 135/309 (43.69%), Postives = 188/309 (60.84%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVV-----VPAKKPDPNNKDE--------------------QLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVALR 855
            F+SGA V+KG KLVQLDT+ +EADL + K  L     +  R+ K+   G  ++A LD     RD   A+++R +A+I QK++ AP+ G+LGLR +  G YV  G  +VWLQ +DPI+ADF V E    + A G  +    +A+P   FKG V   D+R+S+ +RM+ VR KL NPD +LLPGM+ANV V AG+ +++VTVP+TAVT+ LYGD+V+VV      PA KP      E                    +L +ERRFV+ G     RV I EG+K G++VVT+G  K+  GA +K+DNS AL+
Sbjct:   86 FDSGADVEKGAKLVQLDTSVEEADLADNKATLLQTNLDFDRQSKLVKTGAVSQAVLDQTIAKRDSAAAAVQRVEAKIAQKTIAAPFAGRLGLRHMEKGQYVEAGHALVWLQSLDPIWADFPVPEGSVAKFAIGAPIELAADAYPGQVFKGEVEAFDARLSQDTRMLMVRGKLPNPDRKLLPGMFANVAVLAGSAKELVTVPRTAVTYGLYGDSVWVVNEGAPEPAAKPASTVSTEPVASAAAADADPVGAVPAAPKLTVERRFVRVGPTEGDRVAILEGVKAGEQVVTSGQLKLQPGATIKVDNSGALK 394          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A6I0EHB5_HYPSQ (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EHB5_HYPSQ)

HSP 1 Score: 235 bits (600), Expect = 5.090e-72
Identity = 128/287 (44.60%), Postives = 187/287 (65.16%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAK-KPDPNN-KDEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVALRA 858
            FESG  V  G KLVQLD A +EADL +    L  AE    R+  +  +  A+ A++D  R  R+   A++ R +A I QK++ AP+ G+LG+R + +G Y++PG  +V LQ +DPI+ DF + E++ G++  G K+    +A+P   F G V + D+R+++ +R + VR  L NP+  LLPGM+ANV V AG+P  VV+VP+TAVT+SLYGD+V+V+ P + KP P   +D    +ERRFVK+G +R  RV I  GLK G++VVT G  K+  G++VK+DNS AL A
Sbjct:   86 FESGQDVPAGSKLVQLDIAVEEADLASAVAILREAEVAFKRQADLLSKSVASEANVDTARAKRETAEAALNRIKALIAQKAILAPFAGRLGIRHVELGQYISPGLAMVSLQALDPIWVDFPMPEQNVGKLRVGQKIELSVDAFPGKVFTGAVASLDARVAQETRTLLVRGTLPNPERTLLPGMFANVSVLAGSPAKVVSVPRTAVTYSLYGDSVYVLKPQEGKPAPAKPEDAVFVVERRFVKSGQVRQDRVAITSGLKEGEQVVTTGQVKLTNGSQVKVDNSQALVA 372          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: UPI001FAA1A29 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=UPI001FAA1A29)

HSP 1 Score: 234 bits (597), Expect = 1.320e-71
Identity = 126/285 (44.21%), Postives = 187/285 (65.61%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAKKPDPNNK--DEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            F++G  V+KG  LV+LD +T++ADL+  K Q+ NA++   R++ +   G AARA+ D  +  RDQ   + ++T A I QK++ AP+ G+LG+R + VG YVA G  +V LQ++DPIY DF   E+DY  +  G +V+AR +A+P  +FKG V+  D+R+  ++R I VRA+  NPD ++LPGM+ +V  EAG P  VVT P+T+V FSLYGD+VFVV    +PD   K  D  L +ERR VK G  +  R+ +  G++PG++VVT G  K+  GA V+I+   A+
Sbjct:   87 FKNGQDVEKGALLVKLDDSTEQADLRTNKAQMKNAQQAFDRQKMLQASGVAARANFDLAQALRDQAAGAEDKTLALIGQKTITAPFAGRLGIRKVDVGQYVAAGSPMVSLQRLDPIYLDFPAPEQDYPNLYIGQEVSARLDAFPGTRFKGKVSNIDARVDPTTRAILVRAEFANPDKKILPGMFGHVDFEAGKPARVVTAPRTSVAFSLYGDSVFVV----RPDDKQKGFDGPLHVERRSVKVGDAQGDRIVLLAGVEPGEKVVTEGQIKLQPGAHVRIEPDAAM 367          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A6I3KIH1_9HYPH (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KIH1_9HYPH)

HSP 1 Score: 234 bits (596), Expect = 1.970e-71
Identity = 126/285 (44.21%), Postives = 186/285 (65.26%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPAK-KPDPNNKDEQLEI-ERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            FESG  V  G KLVQLD A ++ADL +    L  AE    R+  +  +  A+ A++D  R  RD   A++ R +A I QK++ AP+ G+LG+R + VG Y++PG  +V LQ +DPI+ DF + E++ G++  G  +    +A+    FKG+VT+ D+R+S+ +R + VR  L NPD  LLPGM+ANV V AG P  V+TVP+TA+T+SLYGD+V+V+ P + +P P   ++ + + ERRFVK+G +R  RV +  GLK G++VVT G  K+  G+ VK+DNS AL
Sbjct:   85 FESGQDVASGTKLVQLDIAVEQADLASADAILREAEVAFKRQTDLLVKAVASEANVDTARAKRDTATAALNRIKALIAQKAILAPFAGRLGIRHVEVGQYISPGLAMVSLQALDPIWVDFPMPEQNVGKLHVGETIELTVDAFGKQVFKGSVTSLDARVSQETRTLLVRGTLPNPDHALLPGMFANVQVLAGGPAKVITVPRTAITYSLYGDSVYVLKPQEGQPAPAKPEDTVYVVERRFVKSGQVREDRVAVTSGLKEGEQVVTTGQVKLANGSLVKVDNSQAL 369          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: UPI000930D1F1 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000930D1F1)

HSP 1 Score: 234 bits (596), Expect = 2.030e-71
Identity = 127/290 (43.79%), Postives = 184/290 (63.45%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVV-------VPAKKPDPNNKDEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            FESG  V  G KLVQLD + ++ADL + +  L  AE    R   +  +  A+ A++D  R  RD  +A++ R +A I QK + AP+ G+LG+R + +G Y++PG  +V LQ +DPI+ DF + E++ G++  G  V    +A+P   F GT+T+ D+R+S+ +R + VR  L NPD  LLPGM+ANV V AGAP  V+TVP+TAVT+SLYGD+V+V+        PAK      +D    +ERRF+K G +R+ RV +  GL  GD+VVT+G  K+  GA V++DNS AL
Sbjct:   86 FESGQDVTAGAKLVQLDISVEQADLASAQATLLEAEVAFKRVSDLLIKSVASEANVDTARAKRDTAVAAVNRIKALIAQKGIIAPFAGRLGIRHVELGQYISPGLAMVTLQALDPIWVDFPMPEQNVGKLRVGQTVDLTVDAYPGHVFAGTITSLDARVSQETRTLLVRGTLPNPDRTLLPGMFANVAVLAGAPNSVITVPRTAVTYSLYGDSVYVLKRKEDQAAPAKP-----EDTIYTVERRFIKTGQVRDERVAVTTGLAAGDQVVTSGQVKLTNGALVRVDNSQAL 370          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A7C2QXH0_9HYPH (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QXH0_9HYPH)

HSP 1 Score: 231 bits (589), Expect = 2.620e-70
Identity = 129/291 (44.33%), Postives = 183/291 (62.89%), Query Frame = 1
Query:    1 LFESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVV--VPAKKPDP-----NNKDEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVAL 852
            L ESG  V++G KLVQLDTA + ADL + +  L  AE    R+  +  +   + A+LD  R  RD   A+++R +A I QK + AP+ G+LG+R +  G YV+ G  +V LQ +DPI  DF + E+  GR+  G  +    +A+PD  FKG + + D+R+++ +R + VR  L NPD +LLPGM+ANV V  G P +VVTVP+TAVT++LYGD+V+VV   PAK+  P     NN +  L +ERRFV+ G +R  RV ++ GL  G+ VVT G  K+  GA V+IDNS  L
Sbjct:   85 LIESGQDVQQGTKLVQLDTAVEVADLASSRAVLREAEVAFERQTDLIQKRVTSEANLDTARAKRDTAQAAVKRIEAVIAQKLITAPFSGRLGIRKVEKGQYVSAGMPLVSLQALDPIRVDFPMPEQFVGRLEVGQPIELTVDAYPDRTFKGEIQSLDARVAQDTRTLLVRGLLRNPDHKLLPGMFANVTVLVGNPAEVVTVPRTAVTYTLYGDSVYVVQSAPAKEGAPTQAAGNNDEAALVVERRFVRTGPVREDRVAVSSGLAVGELVVTTGQIKLIPGASVRIDNSQPL 375          
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Match: A0A6A7KWV7_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KWV7_9PROT)

HSP 1 Score: 230 bits (586), Expect = 1.220e-69
Identity = 129/308 (41.88%), Postives = 192/308 (62.34%), Query Frame = 1
Query:    4 FESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRGFAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGSYVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFKGTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVTVPQTAVTFSLYGDNVFVVVPA----KKPDPNNK-------------------DEQLEIERRFVKAGGMRNGRVQIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVALRA 858
            F+SG  VK+G  LVQLD + ++ADL++   QL  AE EL R+Q++  R   A+ + D    ARD   A+++R +A I QK++   + G+LG+R + +G Y+  G  +V LQ++ PIY DF + E+    IA G  V    +A P   F+G + + D+++++++R + VRA+ DN + RL+PGM+ANV V +GAPQ VVT+P+TAVT+SLYGD+V+VVVPA    +KPD  +                    + QL ++RRFV+ G  R GRV I EG+KPG++VV AG  K+   A V++DNS  L A
Sbjct:   88 FDSGQFVKEGTLLVQLDDSIEQADLRSGLAQLKKAELELKRQQELLSRAATAKTNFDAALAARDSAAATVDRVRAVIAQKAITTAFGGRLGIRDVDLGQYLPAGTSMVTLQQLTPIYIDFPMPEQKLSAIAVGDAVEIAVDAEPGRIFEGKIESIDAKVNQATRNVLVRARTDNTEARLVPGMFANVNVISGAPQQVVTLPRTAVTYSLYGDSVYVVVPAAAAGEKPDAPSAGGTXXXXXXXXXXXXXKPAEPQLVVDRRFVRVGEARGGRVSIVEGVKPGEQVVVAGQLKLQPQAHVRVDNSTPLTA 395          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17019.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6X2C4_9HYPH1.150e-11861.13Efflux RND transporter periplasmic adaptor subunit... [more]
A0A537NRX1_9PROT1.220e-11668.00Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2W2APE1_9HYPH5.920e-11456.66Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A3C1NDW0_9HYPH6.140e-7343.69Efflux transporter periplasmic adaptor subunit n=4... [more]
A0A6I0EHB5_HYPSQ5.090e-7244.60Efflux RND transporter periplasmic adaptor subunit... [more]
UPI001FAA1A291.320e-7144.21efflux RND transporter periplasmic adaptor subunit... [more]
A0A6I3KIH1_9HYPH1.970e-7144.21Efflux RND transporter periplasmic adaptor subunit... [more]
UPI000930D1F12.030e-7143.79efflux RND transporter periplasmic adaptor subunit... [more]
A0A7C2QXH0_9HYPH2.620e-7044.33Efflux RND transporter periplasmic adaptor subunit... [more]
A0A6A7KWV7_9PROT1.220e-6941.88Efflux RND transporter periplasmic adaptor subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17019contigP-wetherbeei_contig17019:1..882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog663610.JQKO01000008_gene76
PFAMsHlyD_D23
Model size882
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03585
KEGG TC2.A.6.2,8.A.1.6
KEGG Pathwayko01501,ko01503,map01501,map01503
KEGG ModuleM00646,M00647,M00699,M00718
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.7e-69
EggNOG OGsCOG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,2U2CU@28211|Alphaproteobacteria,3NASE@45404|Beijerinckiaceae
DescriptionHlyD family secretion protein
Cds size882
COG categoryM
BRITEko00000,ko00001,ko00002,ko01504,ko02000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186105.161789-CDS-P-wetherbeei_contig17019:0..8821683186105.161789-CDS-P-wetherbeei_contig17019:0..882Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17019 1..882 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17019.1.1prot_P-wetherbeei_contig17019.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17019 1..882 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17019.1.1

>prot_P-wetherbeei_contig17019.1.1 ID=prot_P-wetherbeei_contig17019.1.1|Name=mRNA_P-wetherbeei_contig17019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
LFESGASVKKGDKLVQLDTATDEADLKNLKVQLANAEEELGRKQKIFDRG
FAARADLDNLRTARDQLLASIERTQAQITQKSVFAPWDGKLGLRSISVGS
YVAPGQKVVWLQKVDPIYADFDVTEEDYGRIADGLKVTARFNAWPDAQFK
GTVTTTDSRMSESSRMITVRAKLDNPDGRLLPGMYANVLVEAGAPQDVVT
VPQTAVTFSLYGDNVFVVVPAKKPDPNNKDEQLEIERRFVKAGGMRNGRV
QIAEGLKPGDRVVTAGHNKIDQGAKVKIDNSVALRAADSATIQ*
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mRNA from alignment at P-wetherbeei_contig17019:1..882+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17019.1.1 ID=mRNA_P-wetherbeei_contig17019.1.1|Name=mRNA_P-wetherbeei_contig17019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig17019:1..882+ (Phaeothamnion wetherbeei SAG_119_79)
TTGTTTGAGTCCGGTGCGAGCGTGAAAAAAGGCGACAAGCTGGTGCAGCT CGACACCGCAACAGATGAGGCCGATCTCAAGAACCTGAAGGTGCAACTGG CAAACGCCGAGGAAGAGCTGGGTCGCAAGCAGAAAATTTTCGACCGCGGC TTCGCAGCCCGGGCCGACCTCGACAATTTGCGCACCGCACGTGATCAGCT GCTGGCCAGCATTGAACGCACCCAGGCGCAGATCACGCAGAAATCAGTCT TCGCGCCGTGGGACGGCAAGCTTGGCCTGCGCAGCATTTCGGTCGGCAGC TATGTGGCTCCCGGCCAGAAGGTGGTCTGGCTTCAGAAAGTTGACCCGAT CTATGCCGATTTCGATGTGACCGAAGAGGACTACGGCCGGATCGCCGACG GATTGAAGGTCACCGCGCGGTTCAACGCCTGGCCTGATGCCCAGTTCAAA GGCACCGTCACGACGACCGATTCGCGGATGTCGGAATCAAGCCGGATGAT TACGGTTCGCGCCAAACTCGACAATCCCGATGGCCGCTTGTTGCCTGGCA TGTATGCCAATGTGCTGGTTGAGGCAGGGGCCCCGCAGGATGTCGTGACC GTGCCGCAGACCGCCGTGACCTTTTCTCTCTATGGCGACAACGTCTTCGT TGTAGTGCCGGCCAAGAAGCCGGATCCGAACAACAAGGATGAGCAGCTCG AAATCGAGCGCCGCTTTGTGAAGGCGGGCGGCATGCGCAATGGGCGGGTG CAAATTGCCGAAGGCCTGAAGCCGGGTGACCGGGTGGTGACGGCCGGACA CAACAAGATCGACCAGGGCGCGAAAGTCAAAATAGACAATTCCGTTGCGC TTCGGGCAGCCGACAGCGCGACCATACAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17019:1..882+

>mRNA_P-wetherbeei_contig17019.1.1 ID=mRNA_P-wetherbeei_contig17019.1.1|Name=mRNA_P-wetherbeei_contig17019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig17019:1..882+ (Phaeothamnion wetherbeei SAG_119_79)
TTGTTTGAGTCCGGTGCGAGCGTGAAAAAAGGCGACAAGCTGGTGCAGCT
CGACACCGCAACAGATGAGGCCGATCTCAAGAACCTGAAGGTGCAACTGG
CAAACGCCGAGGAAGAGCTGGGTCGCAAGCAGAAAATTTTCGACCGCGGC
TTCGCAGCCCGGGCCGACCTCGACAATTTGCGCACCGCACGTGATCAGCT
GCTGGCCAGCATTGAACGCACCCAGGCGCAGATCACGCAGAAATCAGTCT
TCGCGCCGTGGGACGGCAAGCTTGGCCTGCGCAGCATTTCGGTCGGCAGC
TATGTGGCTCCCGGCCAGAAGGTGGTCTGGCTTCAGAAAGTTGACCCGAT
CTATGCCGATTTCGATGTGACCGAAGAGGACTACGGCCGGATCGCCGACG
GATTGAAGGTCACCGCGCGGTTCAACGCCTGGCCTGATGCCCAGTTCAAA
GGCACCGTCACGACGACCGATTCGCGGATGTCGGAATCAAGCCGGATGAT
TACGGTTCGCGCCAAACTCGACAATCCCGATGGCCGCTTGTTGCCTGGCA
TGTATGCCAATGTGCTGGTTGAGGCAGGGGCCCCGCAGGATGTCGTGACC
GTGCCGCAGACCGCCGTGACCTTTTCTCTCTATGGCGACAACGTCTTCGT
TGTAGTGCCGGCCAAGAAGCCGGATCCGAACAACAAGGATGAGCAGCTCG
AAATCGAGCGCCGCTTTGTGAAGGCGGGCGGCATGCGCAATGGGCGGGTG
CAAATTGCCGAAGGCCTGAAGCCGGGTGACCGGGTGGTGACGGCCGGACA
CAACAAGATCGACCAGGGCGCGAAAGTCAAAATAGACAATTCCGTTGCGC
TTCGGGCAGCCGACAGCGCGACCATACAGTGA
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