mRNA_P-wetherbeei_contig17016.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17016.2.1
Unique NamemRNA_P-wetherbeei_contig17016.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7X7A526_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7A526_9BACT)

HSP 1 Score: 157 bits (398), Expect = 1.760e-42
Identity = 73/134 (54.48%), Postives = 102/134 (76.12%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P +GE+ L+   D   +YR L +R+Q+ A   G+ EE AADFMLAV EAA N +KHAKDGR  + ++ +R+IAR+SDRG GI  E++PA+IL PG+ST VSLGMGYT+M+E++D +WL +GP GTVVQL +++
Sbjct:  525 IPVEGELVLETSFDDPESYRALRQRVQQAAITAGMPEENAADFMLAVSEAAANAIKHAKDGRCALYVTPERVIARVSDRGTGIHPENLPATILTPGFSTKVSLGMGYTLMLEVADEMWLTTGPTGTVVQLAKWI 658          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7X7A581_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7A581_9BACT)

HSP 1 Score: 148 bits (373), Expect = 4.670e-40
Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P  G+  L V L     YR L KR++++A + G+  E A D +L VGEA  N +KH ++GR +I  +   IIAR+SDRGEGI+AE IPA+IL PGYST +SLGMG+TIM+++ D +WLA+GPEGT +QLER L
Sbjct:  299 IPIKGQCILQVDLTDIEGYRSLRKRLRDVALDAGMDPEDAEDLVLGVGEAVINAVKHGREGRAEIYTAPGCIIARVSDRGEGIRAEQIPATILLPGYSTQISLGMGFTIMLQVMDRVWLATGPEGTTIQLERSL 432          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7X9J1L1_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X9J1L1_9BACT)

HSP 1 Score: 150 bits (380), Expect = 5.660e-40
Identity = 69/134 (51.49%), Postives = 99/134 (73.88%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P +GE  LD+PL+   + R L  ++  +A+E+G + +     +LA GEA+TN +KHA DGRGQ+ L++DR I RISD+G GI A+D+P  + QPG+ST VSLGMGYT+M+E+ D +WLA+G EGT VQLE++L
Sbjct:  519 IPNEGEQVLDLPLNTAVDDRNLRHKLVGMAEEYGFSHDVVGHLVLAAGEASTNAVKHATDGRGQVFLTKDRFIVRISDKGHGIPADDLPRPLFQPGFSTKVSLGMGYTLMLELVDRVWLATGVEGTTVQLEKWL 652          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7C6XI75_9BACT (PAS domain S-box protein n=2 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C6XI75_9BACT)

HSP 1 Score: 148 bits (374), Expect = 4.430e-39
Identity = 69/134 (51.49%), Postives = 96/134 (71.64%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P  G++ L VPLD   +Y  L   +++IAQ+ G+  E  +D ++A GEAATN +KHA      I L+ DRII R+SDRG GIQ ED+P ++L PG+ST VSLGMGYTIM+ ++D +WLA+  EGTVVQLE+++
Sbjct:  541 IPTVGQLVLSVPLDQPDHYARLRDELRQIAQKAGMTPETTSDLLMAAGEAATNAIKHATCSESTIYLAPDRIIVRVSDRGSGIQPEDLPGALLLPGFSTRVSLGMGYTIMLRLADRVWLATSAEGTVVQLEKWI 674          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7C6XCN0_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C6XCN0_9BACT)

HSP 1 Score: 143 bits (361), Expect = 2.640e-38
Identity = 68/134 (50.75%), Postives = 95/134 (70.90%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P  G   L V L    +YR L +R +++A + G+  E A D +L VGEA  N +KH ++GR +I  +   IIAR++DRGEGI+AE IPA++L PGYST +SLGMG+TIM+++ D +WLA+GPEGT +QLER L
Sbjct:  299 IPIKGRCILQVDLTETESYRNLRRRFRDVALDAGMDPEEAEDLVLGVGEAVINAVKHGREGRAEIYTAPGCIIARVTDRGEGIRAEQIPATLLLPGYSTQISLGMGFTIMLQVMDRVWLATGPEGTTIQLERSL 432          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7X7AWD5_9BACT (ATP-binding protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7AWD5_9BACT)

HSP 1 Score: 136 bits (342), Expect = 2.940e-38
Identity = 62/132 (46.97%), Postives = 93/132 (70.45%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLER 396
            +P  G++ +++PL  E +YR L  +++ IAQ+ G+    A D + A  EA TN +KH  D R +I + ED ++ R+SDRG GI+ EDIP+ + + G+ST VSLGMGYTIM+E++D +WLA+ P GTV+QLE+
Sbjct:   19 IPSIGQLLVEMPLRSEEDYRALRGQIRTIAQQAGMDTTRAGDLVTAAAEAITNAIKHGTDPRAEIWVGEDSVVVRVSDRGPGIRPEDIPSVLFRHGFSTKVSLGMGYTIMLELADRLWLATSPAGTVLQLEK 150          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7X6XII6_9BACT (PAS domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X6XII6_9BACT)

HSP 1 Score: 137 bits (346), Expect = 3.970e-36
Identity = 64/134 (47.76%), Postives = 95/134 (70.90%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            +P      L++ LD   NY  L + + +++Q+ G++ EGA+D +LA GEAATN +KHA  G   + ++ DR+I R+SDRG GI+ ED+P ++L PG+ST VSLGMGYTIM+ + D +WLA+   GTVVQLE+++
Sbjct:  298 IPVAAPPALELLLDRPENYSRLRRELTQLSQDAGMSTEGASDLVLAAGEAATNAVKHASGGCCTVSVTADRVIVRVSDRGTGIRPEDLPGAVLLPGFSTRVSLGMGYTIMLRLVDRVWLATSHCGTVVQLEKWI 431          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7C4V2D5_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C4V2D5_9BACT)

HSP 1 Score: 137 bits (344), Expect = 4.110e-36
Identity = 65/132 (49.24%), Postives = 90/132 (68.18%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLER 396
            +P  GE  LD P+       L  +R++EI  + GL  + A+D   AVGEA  N +KH  D    + L  +RI  R++DRG GI+ ED+PAS+L+PG+ST VS+GMGYTIM+E +D IWL++GPEGTVVQ+E+
Sbjct:  253 IPTSGEKILDEPVRNAEECTLTRRRIREIGLQAGLTLDDASDLESAVGEALVNAVKHGVDAHCTVFLDGERISVRVADRGRGIRPEDLPASVLRPGFSTTVSMGMGYTIMLETADQIWLSTGPEGTVVQVEK 384          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7C3MXK7_9BACT (PAS domain S-box protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3MXK7_9BACT)

HSP 1 Score: 134 bits (338), Expect = 2.670e-35
Identity = 65/134 (48.51%), Postives = 94/134 (70.15%), Query Frame = 1
Query:    1 LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            + Q GE+ LD  ++   ++  L   ++E+AQ  G+ +  A D +L VGEA TN +KHA  GR  +  ++D+IIAR+SD G GIQ   +PAS+L  G+ST VSLGMGYTIM++++D I LA+GP GTVVQLE+++
Sbjct:  249 IEQPGELILDRSVNSLDDFAALRAELREVAQSSGMEQANAEDLVLMVGEAVTNAIKHASGGRCVVTTTDDQIIARVSDCGTGIQFASLPASVLTAGFSTKVSLGMGYTIMLQLADQIRLATGPRGTVVQLEKWI 382          
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Match: A0A7C6X9F1_9BACT (ATP-binding protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C6X9F1_9BACT)

HSP 1 Score: 124 bits (310), Expect = 3.750e-34
Identity = 55/94 (58.51%), Postives = 76/94 (80.85%), Query Frame = 1
Query:  121 ADFMLAVGEAATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTAVSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL 402
            AD MLAV EA  N +KHAKDGR  + ++ +R+IAR+SDRG GI  E++PA+IL PG+ST VSLGMGYT+M+E++D +WL +GP GT+VQL +++
Sbjct:    1 ADLMLAVSEAVANAIKHAKDGRCALYVTPERVIARVSDRGTGIHPENLPATILTPGFSTKVSLGMGYTLMLEVADEMWLTTGPTGTIVQLAKWI 94          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17016.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X7A526_9BACT1.760e-4254.48PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7X7A581_9BACT4.670e-4052.99PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7X9J1L1_9BACT5.660e-4051.49PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7C6XI75_9BACT4.430e-3951.49PAS domain S-box protein n=2 Tax=Armatimonadetes b... [more]
A0A7C6XCN0_9BACT2.640e-3850.75PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7X7AWD5_9BACT2.940e-3846.97ATP-binding protein n=1 Tax=Armatimonadetes bacter... [more]
A0A7X6XII6_9BACT3.970e-3647.76PAS domain-containing protein n=1 Tax=Armatimonade... [more]
A0A7C4V2D5_9BACT4.110e-3649.24PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7C3MXK7_9BACT2.670e-3548.51PAS domain S-box protein n=1 Tax=Armatimonadetes b... [more]
A0A7C6X9F1_9BACT3.750e-3458.51ATP-binding protein n=1 Tax=Armatimonadetes bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17016contigP-wetherbeei_contig17016:1063..1464 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1134413.ANNK01000090_gene133
PFAMsHATPase_c_2,HD_5
Model size402
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-18
EggNOG OGsCOG2172@1|root,COG3437@1|root,COG2172@2|Bacteria,COG3437@2|Bacteria,1V9X2@1239|Firmicutes,4IRGR@91061|Bacilli,1ZHQW@1386|Bacillus
DescriptionHD domain
Cds size402
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186105.138079-CDS-P-wetherbeei_contig17016:1062..14641683186105.138079-CDS-P-wetherbeei_contig17016:1062..1464Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17016 1063..1464 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17016.2.1prot_P-wetherbeei_contig17016.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17016 1063..1464 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17016.2.1

>prot_P-wetherbeei_contig17016.2.1 ID=prot_P-wetherbeei_contig17016.2.1|Name=mRNA_P-wetherbeei_contig17016.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
LPQDGEVTLDVPLDGESNYRLLLKRMQEIAQEHGLAEEGAADFMLAVGEA
ATNVLKHAKDGRGQILLSEDRIIARISDRGEGIQAEDIPASILQPGYSTA
VSLGMGYTIMMEMSDCIWLASGPEGTVVQLERYL
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mRNA from alignment at P-wetherbeei_contig17016:1063..1464-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17016.2.1 ID=mRNA_P-wetherbeei_contig17016.2.1|Name=mRNA_P-wetherbeei_contig17016.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig17016:1063..1464- (Phaeothamnion wetherbeei SAG_119_79)
CTTCCCCAGGACGGAGAGGTCACTCTGGACGTTCCGCTCGACGGAGAGTC CAATTACCGTTTGCTCCTCAAGCGCATGCAAGAAATCGCCCAGGAGCACG GCCTGGCCGAAGAAGGGGCGGCCGATTTCATGCTTGCCGTGGGAGAGGCG GCCACCAACGTGCTTAAGCACGCCAAAGATGGGCGCGGCCAGATTCTGCT CTCCGAAGACCGCATCATTGCCCGCATCAGCGATCGGGGCGAGGGTATCC AGGCCGAGGACATTCCTGCCTCGATCCTGCAGCCCGGCTATTCCACCGCG GTGTCCCTGGGAATGGGCTACACGATTATGATGGAGATGTCCGATTGCAT CTGGCTGGCCTCAGGTCCCGAAGGAACGGTGGTGCAGTTGGAGCGCTACC TG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17016:1063..1464-

>mRNA_P-wetherbeei_contig17016.2.1 ID=mRNA_P-wetherbeei_contig17016.2.1|Name=mRNA_P-wetherbeei_contig17016.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig17016:1063..1464- (Phaeothamnion wetherbeei SAG_119_79)
CTTCCCCAGGACGGAGAGGTCACTCTGGACGTTCCGCTCGACGGAGAGTC
CAATTACCGTTTGCTCCTCAAGCGCATGCAAGAAATCGCCCAGGAGCACG
GCCTGGCCGAAGAAGGGGCGGCCGATTTCATGCTTGCCGTGGGAGAGGCG
GCCACCAACGTGCTTAAGCACGCCAAAGATGGGCGCGGCCAGATTCTGCT
CTCCGAAGACCGCATCATTGCCCGCATCAGCGATCGGGGCGAGGGTATCC
AGGCCGAGGACATTCCTGCCTCGATCCTGCAGCCCGGCTATTCCACCGCG
GTGTCCCTGGGAATGGGCTACACGATTATGATGGAGATGTCCGATTGCAT
CTGGCTGGCCTCAGGTCCCGAAGGAACGGTGGTGCAGTTGGAGCGCTACC
TG
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