mRNA_P-wetherbeei_contig16988.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16988.2.1
Unique NamemRNA_P-wetherbeei_contig16988.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A7Z9UE33_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UE33_9BACT)

HSP 1 Score: 539 bits (1389), Expect = 4.710e-191
Identity = 256/340 (75.29%), Postives = 290/340 (85.29%), Query Frame = 1
Query:   31 MGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            MGPQHPSTHGVLRM+LKMDGER ++C+P+VGYLHRSIEKM+ENRTF Q IPVTDRLDYCTSMTSNYVYV+AVE LADI+PP R EYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLY+F DREKVLDLFE   GARLLYN++R+GGV  +VS+ +L+K++ FLD WEP IP YE LLDENPIFYNR +GVG +    A+ YGVSGPNIRA G   DVR+D PFA YS+LDFDIPV QE DV+ARYR RM E+R+SA+ILRQ F+KIP G   +PLNYR K+P+GETY HIES RGDIGCYLVS GGD P+R KFRTPSF HI +F +LL GVLIPDIM
Sbjct:    1 MGPQHPSTHGVLRMVLKMDGERVVSCEPIVGYLHRSIEKMAENRTFAQVIPVTDRLDYCTSMTSNYVYVMAVEALADITPPARGEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYAFADREKVLDLFEMASGARLLYNFIRIGGVGREVSQKFLDKMMTFLDGWEPRIPMYEALLDENPIFYNRTKGVGYLSQEKAKHYGVSGPNIRASGIAMDVRKDAPFAAYSDLDFDIPVFQEGDVFARYRARMEEMRQSARILRQCFDKIPGGPSSIPLNYRIKIPEGETYQHIESARGDIGCYLVSRGGDMPWRCKFRTPSFVHIQIFRDLLPGVLIPDIM 340          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A7X9AEQ5_9BURK (NADH-quinone oxidoreductase subunit D n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AEQ5_9BURK)

HSP 1 Score: 509 bits (1310), Expect = 1.020e-178
Identity = 242/347 (69.74%), Postives = 282/347 (81.27%), Query Frame = 1
Query:   13 EEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIP-EYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            EEFELNMGPQHPSTHGVLR+ L +DGER + C P +GYLHRSIEK++ENRT+TQ IP+TDRLDYCTSMTSNYVYV+AVE LADI+ PPRAEYIRVIM+ELNRIASHLLWYGT  LE+G TTPF+Y FRDREKVLDLFEA CGARLLYNY+R GGV+ D+   + E+++ FLD WEP+I  EYE LLDENPIFYNR + VG +    A  YGVSGPN+RA G   DVRR+ P++VY EL+FDIPV  E DV+ARYRVRM E+R+SA+ILRQ  EK+P G +  P   R  +P+GETYVH+ESPRGDIGCYLVS G DKPYR KFRTPSF HI +F  L+   LIPDI+
Sbjct:   14 EEFELNMGPQHPSTHGVLRLKLTLDGERVVRCKPEIGYLHRSIEKIAENRTYTQIIPITDRLDYCTSMTSNYVYVMAVETLADITVPPRAEYIRVIMSELNRIASHLLWYGTLALELGGTTPFIYGFRDREKVLDLFEATCGARLLYNYLRFGGVSRDLPEDFCERMLAFLDEWEPLIRREYEDLLDENPIFYNRTKKVGFLSAEKAMAYGVSGPNLRASGIARDVRREHPYSVYPELEFDIPVRTEGDVFARYRVRMEEMRQSARILRQCAEKLPGGPYLEPQPLRMVIPEGETYVHLESPRGDIGCYLVSQGTDKPYRCKFRTPSFHHIEVFQHLVHDCLIPDIV 360          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A0S8IYN1_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=candidate division Zixibacteria bacterium SM23_73_2 TaxID=1703426 RepID=A0A0S8IYN1_9BACT)

HSP 1 Score: 411 bits (1057), Expect = 2.160e-140
Identity = 189/349 (54.15%), Postives = 258/349 (73.93%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            ++TEEFE+NMGP HPSTHGV + +L MDGE+ +   P +G+LHR++EK++ENRT+ Q+IP TDR+DY +SM  NY +VL +EKLA I  P RAEYIRVI+ ELNRIASHL+W GTF L+IGA TPFLY+FR+RE+++DLFE +CG R+ +NY+RVGGV+ D+   ++ K  EF   +EP + EYE +L +NPIF  RA+GVG +P  LA  Y V+GPN+RA G K D+R+++P+++Y   DFDIP    SD + RY VR+RE+RE+ +I++Q  E+IP G F   +   FK P GE Y  IES RG++G Y++SDG  KPYR K RT SF ++A  PE+ +G LI D++
Sbjct:    4 LKTEEFEVNMGPHHPSTHGVCKFVLTMDGEQIIDLVPHIGFLHRALEKIAENRTYLQYIPFTDRIDYVSSMFCNYGFVLTLEKLAKIEAPERAEYIRVIVMELNRIASHLIWLGTFALDIGALTPFLYAFRERERIMDLFEMICGQRMTFNYIRVGGVSKDLPPEFIPKAKEFTRIFEPKVDEYENILTQNPIFLERAKGVGVLPRKLAIDYSVTGPNLRATGFKWDLRKEEPYSIYDRFDFDIPFGANSDTWDRYMVRIREMREANRIVKQALEQIPEGDFKKRVPVLFKPPAGEIYTRIESTRGEMGFYIISDGTTKPYRVKLRTASFSNLAALPEIARGCLIADLV 352          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A1F4XJT0_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=candidate division Zixibacteria bacterium RBG_16_43_9 TaxID=1802784 RepID=A0A1F4XJT0_9BACT)

HSP 1 Score: 407 bits (1047), Expect = 8.160e-139
Identity = 193/349 (55.30%), Postives = 259/349 (74.21%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            I TEEF +NMGPQHPSTHGVLR+LLKMDGE  L   P VGYLHRS+EK++ENRT+ Q+IP TDR+DY ++M  N  + +A+EKLA++  P RAEYIR+IM ELNRIASHL+W GTF L++GA TPFLY FR+REK+LDLFE VCG R+ +NY+RVGGV+ D++  ++    EF++Y+ P + EYE +L +NPIF +R +GVG +    A   GV+GP++R  G K D+R+D+P++VY + +FDIP  + SDV+ RY VR++E+RESAKI++Q  EKIP G         FK P GE YV IE+PRG++G Y+VSDG  KPYR K RT SF ++ + P + +G  I D++
Sbjct:    8 IYTEEFFVNMGPQHPSTHGVLRLLLKMDGEVVLDMVPHVGYLHRSMEKIAENRTYYQYIPYTDRIDYVSAMFCNQAFCMAMEKLANVPVPERAEYIRIIMVELNRIASHLIWLGTFSLDLGAITPFLYCFREREKILDLFEMVCGQRMTFNYMRVGGVSRDITPEFVPMTKEFVNYFLPRVDEYEDILTQNPIFLSRTKGVGLLDQKTAIENGVTGPSLRGTGLKWDLRKDEPYSVYDKFNFDIPTGENSDVWDRYMVRIQEMRESAKIVQQALEKIPEGPIKTKTAAVFKPPAGEVYVRIEAPRGEMGFYIVSDGSPKPYRVKIRTGSFSNLTVLPIISRGWKIADLV 356          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A2A6E0N6_9BACL (NADH-quinone oxidoreductase subunit D n=1 Tax=Candidatus Reconcilbacillus cellulovorans TaxID=1906605 RepID=A0A2A6E0N6_9BACL)

HSP 1 Score: 397 bits (1020), Expect = 8.600e-135
Identity = 185/351 (52.71%), Postives = 249/351 (70.94%), Query Frame = 1
Query:    1 VIRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYR-FKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            ++RTEE  LN+GPQHPSTHGV R ++K+DGE      PV+GYLHR  EK++EN  +TQ IP TDRLDY ++MT+NYVYV  VEKL  +  P RAEY+R+I+ EL RIASHL+W+GT+ L++GA +PFLY+FR+RE ++DLF  +CGARL Y+Y+RVGGV  D   GW+EKV +F+ Y    + EY+ L+  N IF NR +GVG      A  YG+SGPN+R  G K D+R+D P+++Y   +FD+PV Q  D Y RYRVR+ E+RES +IL Q     PSG   +    R  +VP+GE Y  IESPRG+IGCY++S G DKP+R KFR PSF ++ + P+LL G  + +++
Sbjct:    1 MVRTEELLLNVGPQHPSTHGVFRCIIKLDGEIITEATPVIGYLHRGTEKLAENLNYTQIIPYTDRLDYVSAMTNNYVYVHTVEKLLGVEIPERAEYLRLIVMELQRIASHLVWWGTYLLDLGAMSPFLYAFREREMIIDLFNELCGARLTYSYMRVGGVKWDAPPGWIEKVRDFIPYMRKRLEEYDALVTGNEIFINRLKGVGAYDAKTAIEYGLSGPNLRCTGVKWDLRKDQPYSIYDRFEFDVPVGQNGDCYDRYRVRLAEIRESLRILEQAVASFPSGGDIMGKVPRVLRVPEGEAYGAIESPRGEIGCYIISKGKDKPFRLKFRRPSFVNLQILPKLLVGQPVANLI 351          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A1F4Q478_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=candidate division WOR-1 bacterium RIFCSPHIGHO2_01_FULL_53_15 TaxID=1802564 RepID=A0A1F4Q478_9BACT)

HSP 1 Score: 396 bits (1018), Expect = 1.790e-134
Identity = 191/349 (54.73%), Postives = 242/349 (69.34%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            +RTEE+ L+MGPQHPSTHGVLR++LK+DGE      P +GYLHR +EKM ENR + Q IP  DRLDY  +M +N   VL VEKLA+I+PPPRAEYIRVIM ELNRIASHL+W GTF L++GA TPFLY FR+RE ++DLFE   G+RL YNY+R GGVA D+S  ++     FL Y+ P I EYE LL ENPIF  R + VG +    A  YG+SGP +RA G + D+RR  P++VY +  FDIP     D + RY VR+RE+RES KI+ Q    +P+G F + +    K   GE YV  ESPRG++G Y VS G +KPYR K R PSFC++ +  E+LKG  I D++
Sbjct:    4 LRTEEYHLSMGPQHPSTHGVLRLILKLDGEVIKEAIPDMGYLHRGVEKMMENRVYIQIIPFVDRLDYLAAMNNNLAVVLPVEKLANITPPPRAEYIRVIMCELNRIASHLVWLGTFALDLGAVTPFLYCFREREPIMDLFEMAVGSRLTYNYIRYGGVASDISDEFIRDTKAFLSYFRPRIDEYEALLTENPIFLQRTKNVGIIEAKQAVAYGISGPMLRASGVRRDLRRALPYSVYDKFTFDIPTGTVGDCWDRYIVRIREMRESVKIVEQALAGLPAGGFKIKVPLNLKPLAGEAYVPTESPRGELGFYFVSHGTNKPYRMKCRAPSFCNMNILQEMLKGWKIADVV 352          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A1F4R4F2_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=candidate division WOR-1 bacterium RIFCSPLOWO2_02_FULL_46_20 TaxID=1802567 RepID=A0A1F4R4F2_9BACT)

HSP 1 Score: 396 bits (1017), Expect = 2.540e-134
Identity = 192/349 (55.01%), Postives = 251/349 (71.92%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            ++TEE+ L+MGPQHPSTHGVLR+LLK+DGE  L   P +GY+HR +EK++ENR + Q IP TDRLDY +SM++N  YVLAVEKLA+I+ PPR EY+RVIM ELNRIASHL+W GT  L++GA TPFLY FR+RE+VLDLFE   GARL YNY+R GGVA DVS  +++   +F+  +   I EYE LL  NPIF  R + VG +    A  YG+SGP +RA G K D+RR  P+++Y +  FDIP  +  D + RY VR+RE+RES KI+ Q    +P+G F   +    K+P GETYV IESPRG+ G Y+VS+G +KPYR K R PSFC++++   LLKG  + D++
Sbjct:    4 LKTEEYYLSMGPQHPSTHGVLRLLLKLDGEVILQATPDMGYIHRGLEKIAENRLYLQIIPFTDRLDYLSSMSNNLAYVLAVEKLANIAVPPRVEYLRVIMAELNRIASHLIWLGTLALDLGAITPFLYCFREREQVLDLFEMSAGARLTYNYMRFGGVARDVSTEFIKGTADFIKKFGSKITEYEALLTNNPIFLARTKQVGIITPKQAIGYGLSGPLLRASGIKYDLRRALPYSIYEKFSFDIPTGELGDCWDRYIVRIREMRESIKIIDQALAGLPAGDFKAKVPLNLKLPAGETYVPIESPRGEFGFYIVSNGTNKPYRLKIRAPSFCNLSIISNLLKGWKVADVV 352          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A2M7AL72_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_9 TaxID=1973916 RepID=A0A2M7AL72_9BACT)

HSP 1 Score: 395 bits (1016), Expect = 3.360e-134
Identity = 183/350 (52.29%), Postives = 249/350 (71.14%), Query Frame = 1
Query:    1 VIRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            +I+TEEF +NMGPQHPSTHGVLR+LL++DGE  + C P +GYLHR IEK++E R++TQFIP TDRLDY  SM +N  YV AVEKL  I  P R +YIRVIM ELNRIASHL+++G +  ++GA TPFLY+FR+REK++DLFE  CGARL YNY+R+GGV+ D+  G+ +KV++FL Y++P + EY+ L+  N IF  R +G+G +    A   GVSGPN+RA G + D+RR  P+A Y E +FDIP   + D + RY VR+ E+R+S +IL Q    +P G F   +    K P+GE Y   E+PRG++G Y++SDG   PYR K R PSF ++ + P+LL G  + D++
Sbjct:    1 MIKTEEFFVNMGPQHPSTHGVLRLLLELDGEVIVGCTPHIGYLHRGIEKIAEMRSYTQFIPFTDRLDYLASMNNNLAYVQAVEKLMGIDLPKRVKYIRVIMAELNRIASHLVFWGCYAQDLGAVTPFLYAFREREKIIDLFEMTCGARLTYNYLRIGGVSRDLPEGFKDKVLDFLKYFKPRLVEYDNLITNNEIFIKRTKGIGILSKEDALALGVSGPNLRASGVRWDLRRGIPYANYEEFEFDIPTGSQGDCFDRYYVRVEEMRQSVRILEQAINSLPEGEFKAKVPKVIKPPEGEVYSAAENPRGELGFYIISDGSSNPYRLKVRAPSFINLQVLPKLLVGFKVADVI 350          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A660PYK6_9BACT (NADH-quinone oxidoreductase subunit D n=2 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A660PYK6_9BACT)

HSP 1 Score: 395 bits (1016), Expect = 3.850e-134
Identity = 193/351 (54.99%), Postives = 245/351 (69.80%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLN-YRFKVPQGETYVHIESPRGDIGCYLVS-DGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            +RTEEF +NMGP HPSTHGV R +L MDGE  +  +PV+GYLHR++EK+ ENRT+ Q IPV DR +YCTSM+ N V+ LA EKLA I  P RAEY+RVIM ELNRIASHL+W GT  L++GA TPFLY+FR+RE +LDLFE  CG RL YNY+RVGGVA D+   ++ K  +FL  ++  + +YE++L ENPIF  R Q +G +   LA  YGVSGPN+RA G K D+RRDDP+++Y    FDIP  Q  D Y RYRVRM+E+RESAKI+RQ  E++P G      N   FK P GE Y  IE+ RG++G Y+ S D   KP R K R  S+ H+   P +L G  I D++
Sbjct:    4 LRTEEFVVNMGPHHPSTHGVCRFVLTMDGEVIVKAEPVIGYLHRALEKICENRTYAQCIPVLDRFEYCTSMSCNQVFALATEKLAGIEVPERAEYLRVIMLELNRIASHLIWLGTTSLDLGALTPFLYAFREREDILDLFEMTCGQRLTYNYIRVGGVAKDIPAEFIPKAKKFLSTFDHKVDDYERVLTENPIFIARNQNIGVMSQELAIAYGVSGPNLRATGIKFDLRRDDPYSIYDRFKFDIPTGQNGDCYDRYRVRMQEMRESAKIVRQAIEQLPEGEISAKFNPLVFKAPAGELYSRIENSRGEMGVYIQSRDKEKKPLRVKLRGSSYNHLQAMPHVLVGHKIADVV 354          
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Match: A0A2M7WJ70_9BACT (NADH-quinone oxidoreductase subunit D n=1 Tax=candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8 TaxID=1975520 RepID=A0A2M7WJ70_9BACT)

HSP 1 Score: 395 bits (1015), Expect = 5.470e-134
Identity = 179/349 (51.29%), Postives = 253/349 (72.49%), Query Frame = 1
Query:    4 IRTEEFELNMGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFIPVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASHLLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVAHDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALARTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVRMRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIGCYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM 1050
            ++TEEF +NMGPQHPSTHGV ++++KMDGE+  +  P VG+LHRSIEK++ENRT+ QF+P TDR+DYC SM +N+ YV AVEK+A I  P RAEY+RV+M ELNRIASHL+W  TF +++GA TPFLY+FR+RE +LDLFE  CG RL YNY+ +GGV  D+ +G+  K+ EFL  +   + EYE LL  NPIF  R +G+G + +  A  Y VSGP+IR  G K D+R+ +P+++Y++ DFD+PV    DV+ RY+VR+ E+RES KI++Q  E +P G   + +   +K P+GE +  IE+PRG++  +++SDG  KPYR K RT S+C++ + P +    LI D++
Sbjct:    6 LKTEEFMVNMGPQHPSTHGVCKLVIKMDGEQIKSIQPHVGFLHRSIEKIAENRTYAQFVPYTDRIDYCASMNANHAYVTAVEKMAGIQVPERAEYLRVMMAELNRIASHLVWIATFAIDLGAVTPFLYAFRERELILDLFEMTCGQRLTYNYMCIGGVNWDIPQGFEPKLREFLKIFPQKVNEYEYLLTNNPIFLYRTKGIGVLDMDTAFAYSVSGPSIRGSGLKWDIRKAEPYSIYNKFDFDVPVGHTGDVWDRYKVRLNEMRESTKIVQQAIEGLPGGDTKVKVPMTWKPPEGEVFSRIEAPRGEMAYHIISDGTPKPYRIKIRTASYCNLQVLPVIAVNHLIADLV 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16988.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9UE33_9BACT4.710e-19175.29NADH-quinone oxidoreductase subunit D n=1 Tax=Phyc... [more]
A0A7X9AEQ5_9BURK1.020e-17869.74NADH-quinone oxidoreductase subunit D n=1 Tax=Burk... [more]
A0A0S8IYN1_9BACT2.160e-14054.15NADH-quinone oxidoreductase subunit D n=1 Tax=cand... [more]
A0A1F4XJT0_9BACT8.160e-13955.30NADH-quinone oxidoreductase subunit D n=1 Tax=cand... [more]
A0A2A6E0N6_9BACL8.600e-13552.71NADH-quinone oxidoreductase subunit D n=1 Tax=Cand... [more]
A0A1F4Q478_9BACT1.790e-13454.73NADH-quinone oxidoreductase subunit D n=1 Tax=cand... [more]
A0A1F4R4F2_9BACT2.540e-13455.01NADH-quinone oxidoreductase subunit D n=1 Tax=cand... [more]
A0A2M7AL72_9BACT3.360e-13452.29NADH-quinone oxidoreductase subunit D n=1 Tax=Arma... [more]
A0A660PYK6_9BACT3.850e-13454.99NADH-quinone oxidoreductase subunit D n=2 Tax=cand... [more]
A0A2M7WJ70_9BACT5.470e-13451.29NADH-quinone oxidoreductase subunit D n=1 Tax=cand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16988contigP-wetherbeei_contig16988:417..1466 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1449063.JMLS01000022_gene6438
Preferred namenuoD
PFAMsComplex1_49kDa
Model size1050
Max annot lvl91061|Bacilli
KEGG rclassRC00061
KEGG koko:K00333
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114
Exons1
Evalue1.23e-126
EggNOG OGsCOG0649@1|root,COG0649@2|Bacteria,1TQAR@1239|Firmicutes,4HA4Y@91061|Bacilli,26T7E@186822|Paenibacillaceae
EC1.6.5.3
DescriptionNDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Cds size1020
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186104.02246-UTR-P-wetherbeei_contig16988:416..4461683186104.02246-UTR-P-wetherbeei_contig16988:416..446Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16988 417..446 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186104.0354679-CDS-P-wetherbeei_contig16988:446..14661683186104.0354679-CDS-P-wetherbeei_contig16988:446..1466Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16988 447..1466 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16988.2.1prot_P-wetherbeei_contig16988.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16988 447..1466 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16988.2.1

>prot_P-wetherbeei_contig16988.2.1 ID=prot_P-wetherbeei_contig16988.2.1|Name=mRNA_P-wetherbeei_contig16988.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=340bp
MGPQHPSTHGVLRMLLKMDGERCLACDPVVGYLHRSIEKMSENRTFTQFI
PVTDRLDYCTSMTSNYVYVLAVEKLADISPPPRAEYIRVIMTELNRIASH
LLWYGTFCLEIGATTPFLYSFRDREKVLDLFEAVCGARLLYNYVRVGGVA
HDVSRGWLEKVIEFLDYWEPIIPEYEQLLDENPIFYNRAQGVGPVPLALA
RTYGVSGPNIRACGQKEDVRRDDPFAVYSELDFDIPVEQESDVYARYRVR
MRELRESAKILRQVFEKIPSGAFGLPLNYRFKVPQGETYVHIESPRGDIG
CYLVSDGGDKPYRTKFRTPSFCHIALFPELLKGVLIPDIM
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mRNA from alignment at P-wetherbeei_contig16988:417..1466+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16988.2.1 ID=mRNA_P-wetherbeei_contig16988.2.1|Name=mRNA_P-wetherbeei_contig16988.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig16988:417..1466+ (Phaeothamnion wetherbeei SAG_119_79)
GTAATCCGCACCGAAGAATTCGAGCTCAATATGGGCCCGCAGCACCCCTC CACGCACGGGGTTTTGCGGATGCTTCTCAAGATGGACGGCGAGCGCTGCC TGGCCTGCGACCCGGTCGTCGGTTATCTCCACAGGTCCATCGAAAAGATG TCGGAGAACCGCACTTTCACACAGTTTATCCCCGTCACCGACCGCCTCGA TTACTGCACCTCGATGACGTCCAATTACGTCTACGTGCTGGCGGTGGAAA AGCTGGCCGACATCAGCCCCCCTCCCCGCGCCGAATACATCCGCGTCATC ATGACCGAGCTCAACCGTATCGCCAGTCACCTGCTCTGGTACGGCACGTT CTGTCTTGAAATCGGCGCCACCACGCCATTTCTCTACAGCTTCCGCGACC GCGAGAAGGTCCTGGACCTCTTCGAGGCCGTCTGCGGCGCCCGTCTGCTC TACAACTACGTGCGCGTCGGCGGCGTGGCCCACGATGTTTCGCGTGGTTG GCTCGAGAAAGTCATCGAGTTCCTCGACTACTGGGAGCCGATCATTCCCG AATACGAGCAACTCCTCGACGAGAATCCCATCTTCTACAACCGCGCCCAG GGCGTCGGCCCGGTTCCTCTGGCTCTGGCCCGCACGTATGGCGTCAGTGG CCCCAACATTCGCGCCTGCGGCCAAAAAGAAGACGTTCGCCGCGACGATC CCTTCGCGGTCTACTCCGAGCTCGACTTCGACATCCCCGTGGAGCAGGAA TCAGACGTCTACGCCCGCTACCGCGTGCGTATGCGCGAGTTGCGCGAGAG CGCAAAAATCTTGCGCCAGGTCTTTGAAAAGATCCCCTCCGGAGCCTTTG GGTTGCCGCTCAACTACCGCTTTAAGGTTCCCCAGGGCGAAACCTACGTG CACATCGAATCGCCCCGCGGCGATATCGGCTGCTACCTCGTCAGCGACGG CGGGGACAAGCCCTATCGCACCAAATTCAGGACCCCTTCGTTCTGCCACA TCGCGCTCTTTCCCGAGCTCCTCAAGGGCGTCCTGATCCCCGACATTATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16988:417..1466+

>mRNA_P-wetherbeei_contig16988.2.1 ID=mRNA_P-wetherbeei_contig16988.2.1|Name=mRNA_P-wetherbeei_contig16988.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig16988:417..1466+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCCGCAGCACCCCTCCACGCACGGGGTTTTGCGGATGCTTCTCAA
GATGGACGGCGAGCGCTGCCTGGCCTGCGACCCGGTCGTCGGTTATCTCC
ACAGGTCCATCGAAAAGATGTCGGAGAACCGCACTTTCACACAGTTTATC
CCCGTCACCGACCGCCTCGATTACTGCACCTCGATGACGTCCAATTACGT
CTACGTGCTGGCGGTGGAAAAGCTGGCCGACATCAGCCCCCCTCCCCGCG
CCGAATACATCCGCGTCATCATGACCGAGCTCAACCGTATCGCCAGTCAC
CTGCTCTGGTACGGCACGTTCTGTCTTGAAATCGGCGCCACCACGCCATT
TCTCTACAGCTTCCGCGACCGCGAGAAGGTCCTGGACCTCTTCGAGGCCG
TCTGCGGCGCCCGTCTGCTCTACAACTACGTGCGCGTCGGCGGCGTGGCC
CACGATGTTTCGCGTGGTTGGCTCGAGAAAGTCATCGAGTTCCTCGACTA
CTGGGAGCCGATCATTCCCGAATACGAGCAACTCCTCGACGAGAATCCCA
TCTTCTACAACCGCGCCCAGGGCGTCGGCCCGGTTCCTCTGGCTCTGGCC
CGCACGTATGGCGTCAGTGGCCCCAACATTCGCGCCTGCGGCCAAAAAGA
AGACGTTCGCCGCGACGATCCCTTCGCGGTCTACTCCGAGCTCGACTTCG
ACATCCCCGTGGAGCAGGAATCAGACGTCTACGCCCGCTACCGCGTGCGT
ATGCGCGAGTTGCGCGAGAGCGCAAAAATCTTGCGCCAGGTCTTTGAAAA
GATCCCCTCCGGAGCCTTTGGGTTGCCGCTCAACTACCGCTTTAAGGTTC
CCCAGGGCGAAACCTACGTGCACATCGAATCGCCCCGCGGCGATATCGGC
TGCTACCTCGTCAGCGACGGCGGGGACAAGCCCTATCGCACCAAATTCAG
GACCCCTTCGTTCTGCCACATCGCGCTCTTTCCCGAGCTCCTCAAGGGCG
TCCTGATCCCCGACATTATG
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