mRNA_P-wetherbeei_contig16972.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16972.2.1
Unique NamemRNA_P-wetherbeei_contig16972.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: E6W628_DESIS (GDP-mannose 4,6-dehydratase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / DSM 22839 / S5) TaxID=653733 RepID=E6W628_DESIS)

HSP 1 Score: 391 bits (1005), Expect = 4.880e-133
Identity = 194/334 (58.08%), Postives = 241/334 (72.16%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKR 1008
            A V G+ GQDG  LA +L  KGYRV GA R V+    WR+ + G+LG P   L E+DL D +  ++L+   RP E+YN+G  SF+G SF QP+  A  TG+GAV+LLEAIR+ DPGIRY QAS+SEMFG     PQDE TP  PRSPY AAKL+AHW T+ Y+E++GIF +S IL+NHESP RGK FVTRKITD VA +  G+ D LELGNLDA+RDWGYA EYA+ MWR+LQA    +FVLATGR  +VRDFV  AFRA+  +I W+G+   E G +  +GK  VKV+PEFFRPAE   L GN AKAK VLGWEA   ++ +C++MV+ADL+R
Sbjct:    4 AFVTGITGQDGAYLAQILLEKGYRVYGAYRRVSSVNFWRMKDLGVLGDPNLELVEYDLIDQANAIQLIGRLRPDEVYNLGAQSFVGVSFDQPIATASITGIGAVHLLEAIRIIDPGIRYYQASTSEMFGKVQAVPQDELTPFYPRSPYGAAKLYAHWMTVNYRESYGIFGASGILFNHESPLRGKEFVTRKITDGVASIACGQLDCLELGNLDAKRDWGYAQEYAEGMWRMLQAKEPDTFVLATGRTETVRDFVTMAFRAVDIDIAWEGREAEERGYDKRSGKTLVKVNPEFFRPAEVDLLVGNPAKAKQVLGWEATTTLEALCQMMVQADLQR 337          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: A0A7W7Y5S6_9BACT (GDP-mannose 4,6-dehydratase n=1 Tax=Desulfurispira natronophila TaxID=682562 RepID=A0A7W7Y5S6_9BACT)

HSP 1 Score: 390 bits (1003), Expect = 9.810e-133
Identity = 192/334 (57.49%), Postives = 243/334 (72.75%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKR 1008
            A V G+ GQDG  L+ +L  KGY+V GA R V+    WRL E  +L HP   L EFDL D +  + L+   +P E+YN+   SF+G SF QPL  A  TGLGAV+LLEAIR+ +PGIR+ QAS+SEMFG     PQDE TP  PRSPY  AKL+AHW T+ Y+E++GIF SS IL+NHESP RGK FVTRKITD VAR+ LG+ D LELGNLDA+RDWG+A EYA+ MWR+LQA +  +FVLATGR  +VRDFV  AFRA+G +I W+G  + E G +  +GK+ V+V+PEFFRPAE   L G++AKAK VLGWE +  ++ +C++MVEADL+R
Sbjct:    4 AFVTGITGQDGAYLSQILLEKGYQVYGAFRRVSSVNFWRLQELCILDHPNLKLVEFDLTDQANAMHLIGKLQPDEVYNLAAQSFVGVSFEQPLATAHITGLGAVHLLEAIRMVNPGIRFYQASTSEMFGKVQAIPQDESTPFYPRSPYGVAKLYAHWMTVNYRESYGIFGSSGILFNHESPLRGKEFVTRKITDGVARIALGQLDCLELGNLDAKRDWGFAGEYAEGMWRMLQASTPDTFVLATGRTETVRDFVTMAFRAVGIDIDWEGSEVKEKGYDRSSGKVVVRVNPEFFRPAEVDLLIGSSAKAKQVLGWEPQTTLEALCQMMVEADLRR 337          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: UPI001566F4CE (GDP-mannose 4,6-dehydratase n=1 Tax=Paraburkholderia sp. NMBU_R16 TaxID=2698676 RepID=UPI001566F4CE)

HSP 1 Score: 388 bits (997), Expect = 7.990e-132
Identity = 187/336 (55.65%), Postives = 243/336 (72.32%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            A+V G+ GQDG  L  LL  +GY V G  R  +    WR++E G+L HP   L E DL D    + L+++A+P E+YN+   SF+G SF QP   AQ TG+GA+NLLEAIR+ D  IR+ QAS+SEMFG     PQ EDTP  PRSPY  AKL+AHW T+ Y+E++ IF SS IL+NHESP RG+ FVTRKITD+ A++ LG+ DVLELGNLDA+RDWG+A EY + MWR+LQA    +FVLAT R  +VRDFV  AF+A+GTE++W+G+G  E GV A NGK+ V+V+P+F+RPAE   L G+ AKAKA LGWE K  ++E+C++MV+ADL+R E
Sbjct:    4 AVVTGITGQDGAYLTQLLLERGYEVFGTYRRTSSVNFWRMEEVGVLDHPNLHLVEHDLTDLGSTIRLIETAKPREVYNLAAQSFVGVSFDQPGTTAQITGVGALNLLEAIRIVDRSIRFYQASTSEMFGKVQAVPQKEDTPFYPRSPYGVAKLYAHWITVNYRESYDIFGSSGILFNHESPLRGREFVTRKITDSAAKISLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQADEPDTFVLATNRTETVRDFVSMAFKAVGTELKWRGEGEKEEGVNAANGKVLVRVNPKFYRPAEVDLLIGDPAKAKAKLGWEPKTSLEELCKMMVQADLRRNE 339          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: A0A2N8RDB0_PSEST (GDP-mannose 4,6-dehydratase n=3 Tax=Pseudomonas stutzeri TaxID=316 RepID=A0A2N8RDB0_PSEST)

HSP 1 Score: 386 bits (991), Expect = 7.460e-131
Identity = 189/338 (55.92%), Postives = 240/338 (71.01%), Query Frame = 1
Query:    1 RIALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            + A++ G+ GQDG  LA LL  KGY+V+GA R  +    WRL+E G++GHP   L E DL D S  + L++ A P E+YN+   SF+G SF QP+  A+ TGLGAVNLLEAIR+ DP IR+ QAS+SEMFG     PQ E TP  PRSPY  AKL+AHW TI Y+E++GIF +S IL+NHESP RGK FVTRKITDA AR+ LG  D L+LGNLDA+RDWGYA EY + MWR+LQA +  +FVLAT R  SVRDFV  AF+A+  ++ WQG    E G +A  GK  V+V+P F+RPAE   L GN  KA++VLGW+ K  ++E+C+LMV ADL+R +
Sbjct:    6 KTAIITGITGQDGAYLAQLLLAKGYKVVGAYRRTSSVNFWRLEEVGVIGHPCLELVEHDLTDLSASIRLLERAEPHELYNLAAQSFVGVSFDQPITTAEITGLGAVNLLEAIRIVDPKIRFYQASTSEMFGEVQQVPQTEATPFYPRSPYGVAKLYAHWMTINYRESYGIFGTSGILFNHESPLRGKEFVTRKITDAAARISLGTMDCLQLGNLDAKRDWGYAKEYVEGMWRMLQADAPDTFVLATNRTESVRDFVSLAFKAVDIQLDWQGSAETERGTDARTGKTLVEVNPRFYRPAEVDLLIGNPEKAESVLGWKPKTSLEELCKLMVSADLQRAQ 343          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: A0A2D8A1N5_PSESP (GDP-mannose 4,6-dehydratase n=2 Tax=unclassified Pseudomonas TaxID=196821 RepID=A0A2D8A1N5_PSESP)

HSP 1 Score: 385 bits (990), Expect = 1.060e-130
Identity = 187/338 (55.33%), Postives = 241/338 (71.30%), Query Frame = 1
Query:    1 RIALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            + A++ GV GQDG  L  LL  KGY+V G  R  +    WRL+E G+L HP   L E DL D S  + L++ A+P+E+YN+   SF+G SF QP+  A+ TG+GAVNLLEAIR+ +P IRY QAS+SEMFG     PQ E TP  PRSPY  AKL+AHW T+ Y+E++GIF +S IL+NHESP RGK FVTRKITDAVAR+ LG+ DVLELGNLDA+RDWG+A EY + MWR+LQA    +FVLAT R  +VRDFV  AF+A+  ++ WQG    E G+++  GK  V+V+P F+RPAE   L GN  KA+A LGW  K  ++E+C+LMVEADL+R++
Sbjct:    6 KTAIITGVTGQDGAYLTELLLNKGYKVYGTYRRTSSVNFWRLEEVGVLEHPSLELVEHDLTDLSSSIRLMQRAQPSEVYNLAAQSFVGVSFDQPITTAEITGVGAVNLLEAIRIVNPAIRYYQASTSEMFGKVQQIPQTEATPFYPRSPYGVAKLYAHWMTVNYRESYGIFGASGILFNHESPLRGKEFVTRKITDAVARIALGKGDVLELGNLDAKRDWGFAKEYVEGMWRMLQADEPDTFVLATNRTETVRDFVSMAFKAVDIQLDWQGAAEGERGIDSRTGKALVEVNPRFYRPAEVDLLIGNPEKARAALGWAPKTTLEELCQLMVEADLQRVQ 343          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: C8YZ33_ECOLX (GDP-mannose 4,6-dehydratase n=24 Tax=Enterobacteriaceae TaxID=543 RepID=C8YZ33_ECOLX)

HSP 1 Score: 385 bits (989), Expect = 1.310e-130
Identity = 182/336 (54.17%), Postives = 245/336 (72.92%), Query Frame = 1
Query:    1 RIALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKR 1008
            + A++ G+ GQDG  LA LL GKGY+V G  R  +    WR++E G+  +P   L E+DL D S  + L+++    E+YN+   SF+G SF QP+  A+ TGLGAVNLLEAIR+ +P IRY QAS+SEMFG+    PQ EDTP  PRSPY  AKL+AHW T+ Y+E++ IFASS IL+NHESP RG+ FVTRKITD+VA+++LG++DVLELGN+DA+RDWGYA EY + MWR+LQA    +FVLAT R  +VRDFV  AF+A G  +R++G+   E G++   GK  V+V+P+F+RPAE   L GN A+AK +LGWE K  ++++C++MVEADL+R
Sbjct:    2 KSAIITGITGQDGAYLAELLLGKGYKVYGTYRRTSSVNFWRIEELGIKNNPNLHLVEYDLTDLSASIRLMQTTNATEVYNLAAQSFVGVSFDQPVTTAEITGLGAVNLLEAIRIVNPQIRYYQASTSEMFGLVQAVPQKEDTPFYPRSPYGVAKLYAHWMTVNYRESYNIFASSGILFNHESPLRGQEFVTRKITDSVAKIKLGKQDVLELGNMDAKRDWGYAKEYVEGMWRMLQADKPDTFVLATNRTETVRDFVSMAFKAAGFTLRFEGKDENEVGIDVATGKTLVRVNPKFYRPAEVDLLIGNPARAKEILGWEPKTTLEQLCQMMVEADLRR 337          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: A0A4Q3KMC7_9BURK (GDP-mannose 4,6-dehydratase n=2 Tax=Oxalobacteraceae TaxID=75682 RepID=A0A4Q3KMC7_9BURK)

HSP 1 Score: 385 bits (988), Expect = 2.060e-130
Identity = 194/336 (57.74%), Postives = 239/336 (71.13%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            ALV G+ GQDG  LA LL  KGY V G  R  +    WR++E G+ GHP   L E+DL D +  + L+ S RP E+YN+   SF+G SF QP+  A  TG+GAVNLLEAIR+  P  R+ QAS+SEMFG     PQ E+TP  PRSPY  AKL+AHW T+ Y+EA G+FAS+ IL+NHESP RG+ FVTRKITDAVAR+ L R D+LELGNLDARRDWGYA +Y D MWRILQA +  +FVLAT R  +VR+FV  AFRA G  + WQGQG AETG  A  GKL V+VSP+F+RPAE   L G+ +KA+  LGW+A   ++ +CR+MVEADL+R E
Sbjct:    7 ALVTGITGQDGAYLAELLLAKGYAVTGTFRRSSSVNFWRIEELGIAGHPNLQLTEYDLTDPASSIRLLDSTRPDEVYNLAAQSFVGVSFDQPVATAAITGIGAVNLLEAIRIVHPEARFYQASTSEMFGKVQAVPQAENTPFYPRSPYGVAKLYAHWMTVNYREAHGLFASAGILFNHESPLRGREFVTRKITDAVARIVLNRLDMLELGNLDARRDWGYARDYVDGMWRILQAAAPDTFVLATRRAETVREFVAMAFRAAGIHLEWQGQGDAETGRCAETGKLLVRVSPKFYRPAEVDLLIGDPSKAQRELGWKAGTTLEALCRMMVEADLRRNE 342          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: A0A4R6F115_9BURK (GDP-mannose 4,6-dehydratase n=2 Tax=Paraburkholderia sp. BL10I2N1 TaxID=1938796 RepID=A0A4R6F115_9BURK)

HSP 1 Score: 384 bits (987), Expect = 2.630e-130
Identity = 186/336 (55.36%), Postives = 243/336 (72.32%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            A++ GV+GQDG  L+ LL  KGY V G+ R  +    WR++E G+L HP   L E DL D    + LV+ A+P EIYN+   SF+G SF QP+  A+ TG+GAVNLLEAIRV D  IR+ QAS+SEMFG     PQ E TP  PRSPY  AKL+AHW T+ Y+E+FGIF SS IL+NHESP RG+ FVTRKITDAVA+++LG++DVLELGNLDA+RDWG+A EY + MWR+LQA    +FVLAT R  +VRDFV  +F+  G +I WQGQG  + G EAG+G++ V+V+P+F+RPAE   L G+A+KA+  LGW     ++ +C++MV+ADL+R E
Sbjct:    4 AVITGVSGQDGAYLSQLLLEKGYTVYGSYRRTSSVNFWRMEELGVLNHPNLHLIEHDLTDFGSTIRLVQQAKPREIYNLAAQSFVGVSFDQPVTTAEITGVGAVNLLEAIRVLDRSIRFYQASTSEMFGKVQAIPQTESTPFYPRSPYGVAKLYAHWMTVNYRESFGIFGSSGILFNHESPLRGREFVTRKITDAVAKIKLGKQDVLELGNLDAKRDWGFAKEYVEGMWRMLQANEPDTFVLATNRTETVRDFVSMSFKGAGIDIEWQGQGEQQVGAEAGSGRVLVRVNPKFYRPAEVDLLIGDASKARTTLGWVPGTSLESLCKMMVDADLRRNE 339          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: UPI000F86C760 (GDP-mannose 4,6-dehydratase n=1 Tax=Paraburkholderia kururiensis TaxID=984307 RepID=UPI000F86C760)

HSP 1 Score: 384 bits (986), Expect = 4.000e-130
Identity = 183/334 (54.79%), Postives = 243/334 (72.75%), Query Frame = 1
Query:    7 ALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKR 1008
            A+V G+ GQDG  L  LL  +GY V G  R  +    WR+DE G+L  P+  L E DL D    + L++ A+P E+YN+   SF+G SF QP+  A+ TG+GA+++LEAIR+ D  IR+ QAS+SEMFG     PQ EDTP  PRSPY  AKL+AHW T+ Y+E++GIF SS IL+NHESP RG+ FVTRKITD+VA++ LG+ D+LELGNLDA+RDWG+A EY + MWR+LQ   A +FVLAT R  +VRDFV  AF+A+GTEI W+GQ   ETGV+A +GK+ V+V+P+F+RPAE   L G+A+KAK+ LGWE    ++ +C++MVEADL+R
Sbjct:    6 AVVTGITGQDGAYLTQLLLARGYEVYGTYRRTSSVNFWRMDELGVLNDPRLHLVEHDLTDLGATIRLIEKAKPREVYNLAAQSFVGVSFEQPVTTAEITGVGALHVLEAIRILDQSIRFYQASTSEMFGKVQAVPQKEDTPFYPRSPYGVAKLYAHWITVNYRESYGIFGSSGILFNHESPLRGREFVTRKITDSVAKISLGKLDMLELGNLDAKRDWGFAKEYVEGMWRMLQVDEADTFVLATNRTETVRDFVSMAFKAVGTEIEWRGQAEQETGVDASSGKIVVRVNPKFYRPAEVDLLIGDASKAKSKLGWEPTTTLESLCKMMVEADLRR 339          
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Match: UPI0014728F34 (GDP-mannose 4,6-dehydratase n=1 Tax=Uliginosibacterium aquaticum TaxID=2731212 RepID=UPI0014728F34)

HSP 1 Score: 383 bits (984), Expect = 7.510e-130
Identity = 186/338 (55.03%), Postives = 244/338 (72.19%), Query Frame = 1
Query:    1 RIALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGHPQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQATGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPYAAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVARMRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLASVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAETPALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE 1014
            + A+V G++GQDG  LA LL GKGY+VIG  R  +    WR++E G+  HP   L E+DL D S  + L++++   E+YN+   SF+G SF QPL  A+ TG+G VNLLEAIR+ +P IR+ QAS+SEMFG     PQ E TP  PRSPY  AKL+AHW TI Y+E++G+FA S IL+NHESP RG+ FVTRKITD+VA+++LG+ DVLELGNLDA+RDWG+A EY + MWR+LQA    +FVLAT R  +VRDFV  AF+A+G +I W G+   E G  A  GK+ V+V+P+F+RPAE   L GN AKA+ VLGW  K  ++E+CR+MV+ADL+R E
Sbjct:    2 KTAVVTGISGQDGAYLAELLLGKGYKVIGTFRRTSSVNFWRIEELGIQNHPNLQLVEYDLTDLSSSIRLLQTSGATEVYNLAAQSFVGVSFEQPLTTAEITGVGCVNLLEAIRIVNPKIRFYQASTSEMFGKVQAIPQIESTPFYPRSPYGVAKLYAHWMTINYRESYGLFACSGILFNHESPLRGREFVTRKITDSVAKIKLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQADEPDTFVLATNRTETVRDFVTMAFKAVGIQINWSGKDETEQGTCAQTGKVLVRVNPKFYRPAEVELLIGNPAKAQEVLGWAPKTTLEELCRMMVDADLRRNE 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16972.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6W628_DESIS4.880e-13358.08GDP-mannose 4,6-dehydratase n=1 Tax=Desulfurispiri... [more]
A0A7W7Y5S6_9BACT9.810e-13357.49GDP-mannose 4,6-dehydratase n=1 Tax=Desulfurispira... [more]
UPI001566F4CE7.990e-13255.65GDP-mannose 4,6-dehydratase n=1 Tax=Paraburkholder... [more]
A0A2N8RDB0_PSEST7.460e-13155.92GDP-mannose 4,6-dehydratase n=3 Tax=Pseudomonas st... [more]
A0A2D8A1N5_PSESP1.060e-13055.33GDP-mannose 4,6-dehydratase n=2 Tax=unclassified P... [more]
C8YZ33_ECOLX1.310e-13054.17GDP-mannose 4,6-dehydratase n=24 Tax=Enterobacteri... [more]
A0A4Q3KMC7_9BURK2.060e-13057.74GDP-mannose 4,6-dehydratase n=2 Tax=Oxalobacterace... [more]
A0A4R6F115_9BURK2.630e-13055.36GDP-mannose 4,6-dehydratase n=2 Tax=Paraburkholder... [more]
UPI000F86C7604.000e-13054.79GDP-mannose 4,6-dehydratase n=1 Tax=Paraburkholder... [more]
UPI0014728F347.510e-13055.03GDP-mannose 4,6-dehydratase n=1 Tax=Uliginosibacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16972contigP-wetherbeei_contig16972:456..1469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog653733.Selin_0210
Preferred namegmd
PFAMsGDP_Man_Dehyd
Model size1014
Max annot lvl2|Bacteria
KEGG rclassRC00402
KEGG koko:K01711
KEGG ReactionR00888
KEGG Pathwayko00051,ko00520,ko01100,map00051,map00520,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.99e-134
EggNOG OGsCOG1089@1|root,COG1089@2|Bacteria
EC4.2.1.47
DescriptionGDP-mannose 4,6-dehydratase activity
Cds size1014
COG categoryM
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186103.6768453-CDS-P-wetherbeei_contig16972:455..14691683186103.6768453-CDS-P-wetherbeei_contig16972:455..1469Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16972 456..1469 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16972.2.1prot_P-wetherbeei_contig16972.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16972 456..1469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16972.2.1

>prot_P-wetherbeei_contig16972.2.1 ID=prot_P-wetherbeei_contig16972.2.1|Name=mRNA_P-wetherbeei_contig16972.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=338bp
RIALVAGVAGQDGTCLASLLAGKGYRVIGAARSVAKDGLWRLDEAGLLGH
PQFSLEEFDLADASRCLELVKSARPAEIYNVGGLSFIGHSFAQPLQAAQA
TGLGAVNLLEAIRVTDPGIRYVQASSSEMFGIPAVSPQDEDTPLRPRSPY
AAAKLFAHWATITYQEAFGIFASSAILYNHESPWRGKMFVTRKITDAVAR
MRLGREDVLELGNLDARRDWGYAPEYADAMWRILQAGSAGSFVLATGRLA
SVRDFVGSAFRAIGTEIRWQGQGLAETGVEAGNGKLRVKVSPEFFRPAET
PALCGNAAKAKAVLGWEAKVRVDEICRLMVEADLKRLE
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mRNA from alignment at P-wetherbeei_contig16972:456..1469+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16972.2.1 ID=mRNA_P-wetherbeei_contig16972.2.1|Name=mRNA_P-wetherbeei_contig16972.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1014bp|location=Sequence derived from alignment at P-wetherbeei_contig16972:456..1469+ (Phaeothamnion wetherbeei SAG_119_79)
CGCATTGCGCTGGTCGCCGGAGTTGCCGGGCAGGATGGGACGTGCCTTGC GAGCCTCCTGGCCGGCAAGGGCTATCGCGTAATAGGCGCGGCTCGTTCGG TGGCAAAGGACGGACTGTGGCGGCTGGATGAGGCGGGGCTGCTTGGCCAT CCGCAATTCAGTCTTGAGGAGTTCGATCTCGCCGATGCGAGCCGTTGCCT GGAACTGGTCAAGTCCGCCAGGCCCGCTGAAATCTATAACGTCGGGGGGC TCAGCTTCATCGGGCACTCCTTCGCGCAGCCGTTGCAGGCCGCGCAAGCG ACAGGCCTCGGCGCGGTCAACCTGCTGGAAGCGATCCGCGTGACCGATCC CGGCATCAGGTACGTCCAGGCCTCGAGCTCCGAGATGTTCGGTATTCCTG CCGTCTCGCCGCAGGACGAGGACACGCCACTGCGCCCGCGCAGCCCCTAT GCCGCCGCCAAGCTGTTTGCGCATTGGGCCACGATCACCTACCAGGAGGC GTTCGGGATTTTCGCGTCCAGTGCAATCCTGTACAACCACGAGTCCCCTT GGCGAGGGAAGATGTTCGTTACGCGCAAGATCACCGACGCGGTCGCGCGC ATGCGCCTCGGGCGCGAAGACGTGCTCGAGCTAGGCAACCTGGATGCGCG CAGGGACTGGGGTTACGCACCGGAGTATGCGGATGCGATGTGGCGCATCC TCCAGGCCGGGTCCGCCGGGAGCTTTGTGCTTGCGACGGGCCGCCTTGCC TCGGTGAGGGACTTCGTGGGCTCCGCGTTCCGGGCAATCGGCACCGAGAT TCGCTGGCAGGGGCAGGGCTTGGCGGAGACGGGAGTCGAAGCGGGTAACG GCAAGCTCCGGGTGAAGGTATCACCGGAGTTTTTCAGGCCGGCGGAAACG CCGGCACTTTGCGGCAACGCGGCCAAGGCCAAGGCAGTGCTGGGCTGGGA AGCGAAAGTCAGGGTGGACGAGATTTGCCGATTGATGGTCGAAGCCGACC TGAAGCGACTGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16972:456..1469+

>mRNA_P-wetherbeei_contig16972.2.1 ID=mRNA_P-wetherbeei_contig16972.2.1|Name=mRNA_P-wetherbeei_contig16972.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1014bp|location=Sequence derived from alignment at P-wetherbeei_contig16972:456..1469+ (Phaeothamnion wetherbeei SAG_119_79)
CGCATTGCGCTGGTCGCCGGAGTTGCCGGGCAGGATGGGACGTGCCTTGC
GAGCCTCCTGGCCGGCAAGGGCTATCGCGTAATAGGCGCGGCTCGTTCGG
TGGCAAAGGACGGACTGTGGCGGCTGGATGAGGCGGGGCTGCTTGGCCAT
CCGCAATTCAGTCTTGAGGAGTTCGATCTCGCCGATGCGAGCCGTTGCCT
GGAACTGGTCAAGTCCGCCAGGCCCGCTGAAATCTATAACGTCGGGGGGC
TCAGCTTCATCGGGCACTCCTTCGCGCAGCCGTTGCAGGCCGCGCAAGCG
ACAGGCCTCGGCGCGGTCAACCTGCTGGAAGCGATCCGCGTGACCGATCC
CGGCATCAGGTACGTCCAGGCCTCGAGCTCCGAGATGTTCGGTATTCCTG
CCGTCTCGCCGCAGGACGAGGACACGCCACTGCGCCCGCGCAGCCCCTAT
GCCGCCGCCAAGCTGTTTGCGCATTGGGCCACGATCACCTACCAGGAGGC
GTTCGGGATTTTCGCGTCCAGTGCAATCCTGTACAACCACGAGTCCCCTT
GGCGAGGGAAGATGTTCGTTACGCGCAAGATCACCGACGCGGTCGCGCGC
ATGCGCCTCGGGCGCGAAGACGTGCTCGAGCTAGGCAACCTGGATGCGCG
CAGGGACTGGGGTTACGCACCGGAGTATGCGGATGCGATGTGGCGCATCC
TCCAGGCCGGGTCCGCCGGGAGCTTTGTGCTTGCGACGGGCCGCCTTGCC
TCGGTGAGGGACTTCGTGGGCTCCGCGTTCCGGGCAATCGGCACCGAGAT
TCGCTGGCAGGGGCAGGGCTTGGCGGAGACGGGAGTCGAAGCGGGTAACG
GCAAGCTCCGGGTGAAGGTATCACCGGAGTTTTTCAGGCCGGCGGAAACG
CCGGCACTTTGCGGCAACGCGGCCAAGGCCAAGGCAGTGCTGGGCTGGGA
AGCGAAAGTCAGGGTGGACGAGATTTGCCGATTGATGGTCGAAGCCGACC
TGAAGCGACTGGAA
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