prot_P-wetherbeei_contig16972.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig16972.1.1
Unique Name	prot_P-wetherbeei_contig16972.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	109

Homology

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A6M4H5U6_9PROT (dTDP-glucose 4,6-dehydratase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H5U6_9PROT)

HSP 1 Score: 166 bits (420), Expect = 2.810e-48
Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VLA+GR+GE YN+GG AEM+N++VV  LC  LD  RPRDGGH  L+TYV DRPGHDRRYAIDA K+R ELGW+P E+F +GL KTV+WYL +ADWV  + SG YR
Sbjct:  234 AIRAVLAKGRLGEVYNVGGNAEMKNLDVVHALCDTLDRERPRDGGHRKLITYVKDRPGHDRRYAIDARKIRGELGWSPSETFETGLAKTVRWYLGNADWVAQVKSGEYR 342

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: UPI0019B2C472 (dTDP-glucose 4,6-dehydratase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B2C472)

HSP 1 Score: 165 bits (418), Expect = 5.340e-48
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VLARGR GETYNIGG AE +NIEVV  +C  L  LRPRD G   L+T V DRPGHDRRYAIDATK+RTELGW+P+ESF +GL KTV+WYLD+A WV ++ SG YR
Sbjct:  233 AIRLVLARGRPGETYNIGGNAERRNIEVVNAICDALQALRPRDTGFKRLITSVADRPGHDRRYAIDATKIRTELGWSPRESFETGLAKTVRWYLDNAPWVAEVKSGEYR 341

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A521Z9W9_9BURK (dTDP-glucose 4,6-dehydratase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A521Z9W9_9BURK)

HSP 1 Score: 165 bits (417), Expect = 7.900e-48
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHA--ALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VLARGR+GETYNIGG  EM N+E+V LLC  LD LRPR  G +    +TYV DRPGHDRRYAIDA K+  ELGWTP+E+FASG+ KT+ WYLDHADWV++I SG YR
Sbjct:  233 AIRTVLARGRLGETYNIGGNNEMTNLEIVHLLCDRLDALRPRRDGQSYRTQITYVPDRPGHDRRYAIDARKIAGELGWTPRETFASGIEKTIAWYLDHADWVENITSGQYR 343

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A1F4B0M6_9PROT (dTDP-glucose 4,6-dehydratase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B0M6_9PROT)

HSP 1 Score: 164 bits (414), Expect = 2.220e-47
Identity = 72/110 (65.45%), Postives = 88/110 (80.00%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGG-HAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR+VLARGR+GETYN+GG  EM+NI+VVKL+C+LLD  RPR  G +  L+ +V DRPGHDRRYA+D  K+R ELGW P ESF +GL KTV WYL+H DWV ++ SGAYR
Sbjct:  233 AIREVLARGRVGETYNVGGNCEMRNIDVVKLVCALLDEARPRPSGRYEELIAFVADRPGHDRRYAVDTAKIRGELGWQPAESFETGLRKTVHWYLEHRDWVSEVTSGAYR 342

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: R7KKA0_9BURK (dTDP-glucose 4,6-dehydratase n=2 Tax=Sutterellaceae TaxID=995019 RepID=R7KKA0_9BURK)

HSP 1 Score: 162 bits (410), Expect = 8.390e-47
Identity = 72/110 (65.45%), Postives = 90/110 (81.82%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRP-RDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VL  G+IGETYN+GG  E  NI +VK +C++LD +RP RDG +A L+TYV DRPGHDRRYAID+TK++T+LGW PKE F +G+ KTVQWYLDH DWV+++ SGAYR
Sbjct:  234 AIRCVLENGKIGETYNVGGHNERNNITIVKTICAILDEMRPHRDGSYANLITYVKDRPGHDRRYAIDSTKLQTQLGWKPKECFETGIHKTVQWYLDHQDWVKNVQSGAYR 343

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A6B3SUJ3_9BURK (dTDP-glucose 4,6-dehydratase n=1 Tax=Noviherbaspirillum galbum TaxID=2709383 RepID=A0A6B3SUJ3_9BURK)

HSP 1 Score: 162 bits (410), Expect = 9.430e-47
Identity = 74/109 (67.89%), Postives = 84/109 (77.06%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR+VL  GR+GETYNIGG  E  N+EVV  LC +LD L PR G H  LVTYV DRPGHDRRYAIDA K+  ELGW P E+F SG+ KTVQWYLDH DWV+D+ SGAY+
Sbjct:  233 AIRRVLEAGRVGETYNIGGWNEKTNLEVVHTLCDILDALAPRAGSHRDLVTYVKDRPGHDRRYAIDARKLERELGWKPAETFDSGIRKTVQWYLDHQDWVRDVQSGAYQ 341

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BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A1M3C3U6_9BURK (dTDP-glucose 4,6-dehydratase n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1M3C3U6_9BURK)

HSP 1 Score: 162 bits (409), Expect = 1.210e-46
Identity = 75/111 (67.57%), Postives = 89/111 (80.18%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGG--HAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR+VL  GR+GETYN+GG  EM NIE+VKL+C+LLD LRPR  G  +AA +TYVTDRPGHDRRYAIDA K+  EL W P E+FA+G+ KTVQWYLDH +WV  + SGAYR
Sbjct:  233 AIRRVLDAGRLGETYNVGGWNEMPNIEIVKLVCALLDELRPRGDGQPYAAQITYVTDRPGHDRRYAIDARKLERELAWRPAETFATGIRKTVQWYLDHPEWVATVQSGAYR 343

[Close]

BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A1P8FG61_9PROT (dTDP-glucose 4,6-dehydratase n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FG61_9PROT)

HSP 1 Score: 161 bits (407), Expect = 2.410e-46
Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR+VL  GR+GE YN+GG AE +N+EVV  LC +LD  RPR GGH AL+TYV DRPGHDRRYAID+ K++ ELGW P+ESF +GL KTV+WYLD+A WV ++ SG YR
Sbjct:  234 AIRKVLDGGRVGEVYNVGGNAEKRNLEVVHTLCDILDRERPRAGGHRALITYVADRPGHDRRYAIDSRKLQVELGWRPRESFETGLAKTVRWYLDNAAWVANVKSGEYR 342

[Close]

BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A6M4GPM9_9PROT (dTDP-glucose 4,6-dehydratase n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GPM9_9PROT)

HSP 1 Score: 161 bits (407), Expect = 2.470e-46
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VL RG +GE YN+GG AE +N+EVV  LC +LD  RPR GGH AL+ +VTDRPGHDRRYAID+ K++  LGW P+ESF SGL KTV+WYL HADWV  + SG YR
Sbjct:  234 AIRLVLERGALGEVYNVGGNAERRNLEVVHTLCDILDAERPRSGGHRALIQFVTDRPGHDRRYAIDSRKIQGALGWRPRESFESGLAKTVRWYLGHADWVAQVRSGEYR 342

[Close]

BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Match: A0A839LFH9_9BURK (dTDP-glucose 4,6-dehydratase n=1 Tax=Mitsuaria sp. WAJ17 TaxID=2761452 RepID=A0A839LFH9_9BURK)

HSP 1 Score: 160 bits (406), Expect = 3.320e-46
Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 0

Query:    1 AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGG-HAALVTYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWVQDIASGAYR 109
            AIR VLA GR+GETYNIGG  EM NI++VK +C+LLD LRP   G ++ L+TYV DRPGHDRRYAIDA K+  ELGW P E+FA+G+ KTVQWYLDH +WVQ + SGAYR
Sbjct:  234 AIRAVLAGGRVGETYNIGGWNEMANIDIVKTVCALLDELRPDTAGPYSRLITYVKDRPGHDRRYAIDARKIERELGWRPAETFATGIRKTVQWYLDHPEWVQRVQSGAYR 343

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig16972.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6M4H5U6_9PROT	2.810e-48	66.97	dTDP-glucose 4,6-dehydratase n=1 Tax=Usitatibacter...	[more]
UPI0019B2C472	5.340e-48	69.72	dTDP-glucose 4,6-dehydratase n=1 Tax=Burkholderial...	[more]
A0A521Z9W9_9BURK	7.900e-48	68.47	dTDP-glucose 4,6-dehydratase n=1 Tax=Burkholderiac...	[more]
A0A1F4B0M6_9PROT	2.220e-47	65.45	dTDP-glucose 4,6-dehydratase n=1 Tax=Betaproteobac...	[more]
R7KKA0_9BURK	8.390e-47	65.45	dTDP-glucose 4,6-dehydratase n=2 Tax=Sutterellacea...	[more]
A0A6B3SUJ3_9BURK	9.430e-47	67.89	dTDP-glucose 4,6-dehydratase n=1 Tax=Noviherbaspir...	[more]
A0A1M3C3U6_9BURK	1.210e-46	67.57	dTDP-glucose 4,6-dehydratase n=2 Tax=Burkholderial...	[more]
A0A1P8FG61_9PROT	2.410e-46	65.14	dTDP-glucose 4,6-dehydratase n=1 Tax=Betaproteobac...	[more]
A0A6M4GPM9_9PROT	2.470e-46	65.14	dTDP-glucose 4,6-dehydratase n=1 Tax=Usitatibacter...	[more]
A0A839LFH9_9BURK	3.320e-46	67.27	dTDP-glucose 4,6-dehydratase n=1 Tax=Mitsuaria sp....	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..83 e-value: 1.3E-30 score: 108.8
None	No IPR available	GENE3D	3.90.25.10		coord: 24..96 e-value: 1.3E-30 score: 108.8
None	No IPR available	PANTHER	PTHR43000:SF7	DTDP-D-GLUCOSE 4,6-DEHYDRATASE	coord: 1..107
None	No IPR available	PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	coord: 1..107
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 11..88 e-value: 3.8E-12 score: 46.3
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig16972	contig	P-wetherbeei_contig16972:79..405 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig16972.1.1	mRNA_P-wetherbeei_contig16972.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig16972 79..405 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig16972.1.1 ID=prot_P-wetherbeei_contig16972.1.1|Name=mRNA_P-wetherbeei_contig16972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
AIRQVLARGRIGETYNIGGGAEMQNIEVVKLLCSLLDTLRPRDGGHAALV
TYVTDRPGHDRRYAIDATKVRTELGWTPKESFASGLGKTVQWYLDHADWV
QDIASGAYR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf