mRNA_P-wetherbeei_contig1697.1.12 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1697.1.12
Unique NamemRNA_P-wetherbeei_contig1697.1.12
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI)

HSP 1 Score: 661 bits (1706), Expect = 1.840e-216
Identity = 364/675 (53.93%), Postives = 456/675 (67.56%), Query Frame = 2
Query:   89 VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGA-VANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLD---GGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            VVAD+T L HIHE GILHNLRER++ +D +PYTFMGT+LIAVNPLRR+ +P   +++DR LNP+ PHPYA+AELAY Q+RL                   G G  VANQSI+VSGESGAGKTETSKI+L +L+ R+ G     G+A LD ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+KLQFT                    +L GA +ETYLLEKSRVL    GER+FH+ YQL+AGA     + +G+D      E +  L   DC  ++ +DD AEF  V+ A   +  M E  + +VW+++A+VLHLS ++F   D  +QGE+A   D  AL+ +AAL  V E AL A+L QR V  RGE+FTKQL+  +A   RDA  K+LYEALFLW+V  IN +LG+   S PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NEL+LYEEEGI+VVVS+CPDN+ECI +LS K KGIIP+L  +C+EPN +DARY   LHK + RH  FP   P+D +  F VKH+AG VKYTV+GWV RNMD+IPE+F    A S  +V R    +YG P    PT  +  +                +P+V K F+ SM  L+  L +T  +F+RCIKPNA M+ GV N RYV +QL+CLG+LQTCEVLKV 
Sbjct:   60 VVADMTSLHHIHEAGILHNLRERSKLQDQRPYTFMGTILIAVNPLRRVPNPEMTDYMDRSLNPETPHPYAIAELAYHQMRL-------------------GAGRKVANQSIVVSGESGAGKTETSKIILTFLTHRSVG-----GVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTK----------------DKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYQLVAGA-----SGVGIDLKLQDVESYKILSQSDCTTLDDVDDAAEFRTVKGAFD-TIGMGEESQLQVWQMLASVLHLSNVEFDKVDH-EQGEIATISDREALSTLAALLAVEESALEAMLTQRVVVTRGETFTKQLSAADANLTRDAIVKSLYEALFLWIVSVINTSLGKGEDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSTCPDNAECILMLSTKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHQDFPRTQPRDMRENFWVKHYAGKVKYTVEGWVERNMDRIPESFGGTLAASTHAVVRASTSMYGQP----PTGAAAKAKPTRSRKTL------VKPTVAKAFLASMQDLNMTLLSTTCNFIRCIKPNAAMKCGVFNNRYVVEQLQCLGILQTCEVLKVG 677          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE)

HSP 1 Score: 659 bits (1699), Expect = 2.460e-216
Identity = 357/672 (53.12%), Postives = 458/672 (68.15%), Query Frame = 2
Query:   89 VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGA-VANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            VV D+T L HIHE GILHNLRER++ R+ +PYTFMGT+LIAVNPL+R+  P   +++D+ LNP+ PHPYA+AELAY Q+RL                   G G  +ANQSI+VSGESGAGKTETSKI+L +L++R+ G     G+A LD ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+KLQFT                    +L GA +ETYLLEKSRVL    GER+FH+ YQL+AGA + L  +L L+   E +  L   +CV ++ MDD  EF  V+ A   +  M    + +VW+++A+VLH+S L+F   D  +QGE+A   D  AL+ +AA   V E AL A+L QR V  RGE+FTKQL ++EA   RDA  K+LYEALFLWVV  IN +LG+   S PFIGVLDIFG  NF  +N FEQLLINFTNESLQDTFNKQVF NEL+LYE EGI+VVVS+CPDN+EC+ +LS++ KGIIP+L  +C+EPN +D+RY ++LHKEH RH  FP   P+D + CF V+H+AG VKYTV+GWV RNMD++PE+F+   A S   V +E    YG P +    AK+  +                +P+V K F+ SM  L+  L +T  +F RCIKPNAEM+ GV + RYV DQL+CLG+LQTCEVLKV 
Sbjct:   74 VVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRL-------------------GAGRKLANQSIVVSGESGAGKTETSKIILSFLTRRSVG-----GIANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTK----------------DKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGA-SALDDDLKLED-VESYKILAQSECVTLDCMDDTEEFATVKSAFD-TIGMSAESQAQVWRMLASVLHMSNLEFDKVDH-EQGEIASISDREALSTLAAFLAVEESALEAMLTQRVVVTRGETFTKQLGLEEANLTRDAIVKSLYEALFLWVVAVINTSLGKGPDSLPFIGVLDIFGALNFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSKVVQEATSHYGKPPSGGAAAKAKPTRARKTL---------VKPTVAKAFLGSMEALNVTLLSTMCNFARCIKPNAEMQCGVFDNRYVVDQLQCLGILQTCEVLKVG 692          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI)

HSP 1 Score: 659 bits (1700), Expect = 3.800e-215
Identity = 358/672 (53.27%), Postives = 459/672 (68.30%), Query Frame = 2
Query:   89 VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGA-VANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            VV D+T L HIHE GILHNLRER++ R+ +PYTFMGT+LIAVNPL+R+  P   +++D+ LNP+ PHPYA+AELAY Q+RL                   G G  +ANQSI+VSGESGAGKTETSKI+L +L++R+ G     G+A LD ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+KLQFTT                   +L GA +ETYLLEKSRVL    GER+FH+ YQL+AGA + L  +L L+   E +  L   +CV ++ MDD  EF  V+ A   +  M    + +VW+++A+VLH+S L+F   D  +QGE+A   D  AL+ +AA   V E AL A+L QR V  RGE+FT QL ++EA   RDA  K+LYEALFLWVV  IN +LG+   S PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NEL+LYE EGI+VVVS+CPDN+EC+ +LS++ KGIIP+L  +C+EPN +D+RY ++LHKEH RH  FP   P+D + CF V+H+AG VKYTV+GWV RNMD++PE+F+   A S   V +E    YG   +    AK+  +                +P+V K F+ SM  L+  L +T  +F RCIKPNAEM+ GV + RYV DQL+CLG+LQTCEVLKV 
Sbjct:   74 VVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRL-------------------GAGRKMANQSIVVSGESGAGKTETSKIILSFLTRRSVG-----GVANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTT----------------DKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGA-SALDDDLKLED-VESYKILAQSECVTLDCMDDTEEFGTVKSAFD-TIGMSPESQAQVWRMLASVLHMSNLEFDKVDH-EQGEIASISDREALSTLAAFLAVEEGALEAMLTQRVVVTRGETFTIQLGLEEANLTRDAIVKSLYEALFLWVVAVINTSLGKGPDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSKVVQEATSHYGKAPSGGAAAKAKPTRARKTL---------VKPTVAKAFLGSMEALNVTLLSTMCNFARCIKPNAEMQCGVFDNRYVVDQLQCLGILQTCEVLKVG 692          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI)

HSP 1 Score: 650 bits (1678), Expect = 7.860e-212
Identity = 356/678 (52.51%), Postives = 457/678 (67.40%), Query Frame = 2
Query:   74 PHRS*VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAG-APTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPA-ASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            PH   VV+D+T L HIHE GIL+NL ER +  + +PYTFMGT+LIAVNPLR++ DP  +++++R L+P+ PHPYA+AEL+Y Q+RL                   G    ANQSI+VSGESGAGKTETSKI+LR+L+ R+ G     G+ GL+ ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+K+QFT                    +L GA +ETYLLEKSRVL    GER+FH+ Y+L+AG A + L TEL L G AE +  L    C+ ++G+DD  +F  V+KA   +  MD+  + +VWK +AAVLH+S L+F   D+ +QGE+A   D  AL  +A+L GV E  L  +L QR V+ R E F KQL   +A   RDA  K+LYEALFLW+V+ IN +LG+   S PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NEL+LYEEEGI+VVVSSCPDN+ C+ +LS K KGIIP+L  +C+EPN +DARY   LHK + RH  FP   PKD + CF VKH+AG VKYT+ GWV RNMD IP++F D  A S + V +E +  YG  + A A + + G+S                +P+V K F+ SM  L+  L  T  +F RCIKPNA M+ GV + +YV +QL+CLG+LQTCEVLKV 
Sbjct:   77 PHNPKVVSDMTALHHIHEAGILYNLGERAKLDNQRPYTFMGTILIAVNPLRKVADPEMSKYMNRSLDPEAPHPYAIAELSYHQMRLG------------------GGRKAANQSIVVSGESGAGKTETSKIILRFLTHRSVG-----GVTGLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTK----------------DKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYELVAGGAASGLATELKL-GSAETYKILGENGCITLDGVDDVKQFQNVQKAFD-TIGMDKDTQLQVWKALAAVLHMSNLRFDKADS-EQGEIAAISDRGALATLASLLGVEEAVLEKMLTQRVVQTRVEVFVKQLEENDANLTRDAIVKSLYEALFLWIVQLINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSSCPDNTACLVMLSDKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHMDFPRTQPKDMRDCFWVKHYAGKVKYTIGGWVERNMDSIPQSFNDTLATSTLKVVQESVASYGQVSPAPASSGRRGSSLK--------------KPTVAKSFLASMRNLNETLLGTTCNFARCIKPNAAMKCGVYDNKYVVEQLQCLGILQTCEVLKVG 698          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA)

HSP 1 Score: 642 bits (1655), Expect = 1.150e-211
Identity = 358/706 (50.71%), Postives = 455/706 (64.45%), Query Frame = 2
Query:   74 PHRS*VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAK---------------------PVDVAALT----------RVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            P    VVAD+T LFHI+EPGILHNLR R++ RD +PYTFMGTLLI VNPL+ + DPP   +V + L+P+ PHPYA+AELAY Q++L                   GTG + NQS++VSGESGAGKTETSKI+++YL+ RT G     G+ GLD R++ESSP+LE+FGNAKTLRN NSSRFGKF+KLQFT   AA                L G  +ETYLLEKSRVL+ +  ER+FH+ Y+L+AGA   L+  LGL G A+ +  L    C  +EG+DD  +F  V  A   +  +    +++VW+++AAVLH + ++FA E+TA+ GEVA                      P DV               +A L GV  D +  LL  RT+   GE+F K+  + EA YARDA AKALYE++FLWVV+ ++ +LG+ A   PFIGVLDIFGFENF  N  EQLLINFTNESLQD FNKQVF NE+ LYE+EGIEV VSSCPDNSECI LLS+K  GII  L  +C EP  TD  Y   LH +H R   FP VH K  +  FMV+H+AG V+YTVDGW+TRN D+IPE F DV A S++   +   ++    A +   A+  +       XXX      ++P+V +GFMDSM++L AVL+ T  SFVRCIKPNA+M+ GV N +YV DQL+CLG+LQTCEVLKV 
Sbjct:   77 PQNPKVVADMTALFHINEPGILHNLRVRSDLRDQRPYTFMGTLLICVNPLQVVPDPPMETYVGQQLDPEAPHPYAIAELAYHQMKL-------------------GTGGLTNQSVVVSGESGAGKTETSKIIIKYLAHRTQG-----GVGGLDNRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTADTAA----------------LAGGFMETYLLEKSRVLSQAQNERNFHILYELVAGADPALKKRLGL-GSAKDYHILFQSGCTTLEGVDDAEQFRGVVHAFN-TVGLTAEVQEQVWRMLAAVLHTACMKFAAEETAE-GEVATVPQKDQEEEAAEASAAANCGAPCDVRTARVDMRDEGQGELIAELLGVTADDVSKLLTTRTMTTHGETFVKRNGLPEAAYARDAAAKALYESVFLWVVKTVSDSLGRGAEHLPFIGVLDIFGFENFARNEMEQLLINFTNESLQDIFNKQVFINEIHLYEQEGIEVAVSSCPDNSECIKLLSSKPNGIITLLDAVCREPAPTDEGYTRQLHAKHARDQHFPAVHKKFMKDAFMVRHYAGRVQYTVDGWITRNNDRIPEAFQDVLAKSSLEAVQGAAKVLSAAAPAPGHARVKSGTFGGGAXXXTKSSLGSKPTVARGFMDSMTKLQAVLEKTTCSFVRCIKPNADMKLGVFNNKYVVDQLQCLGILQTCEVLKVG 739          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI)

HSP 1 Score: 646 bits (1666), Expect = 1.400e-210
Identity = 363/676 (53.70%), Postives = 454/676 (67.16%), Query Frame = 2
Query:   89 VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGA-VANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLD---GGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYG-TPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            VV+D+T L HIHE GIL+NLRER++    +PYTFMGT+LIAVNPLRR+ DP  +E+++R L+P+ PHPYA+AELAY Q+RL                   GTG   ANQSI+VSGESGAGKTETSKI+L +L+ R+ G     G+A LD ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+KLQFT                    +L GA +ETYLLEKSRVL P  GER+FHV YQL+AGA     ++LGLD    G   +  L  GDC  ++G+DD  EF  V  A   +  M E  + +VW+ +AA+LHLS L+F   D  QQGE+A   D   L+ +A L GVGE AL  +L QR V  RGE+FT QL + +A + RDA  K+LYEALFLW+V  IN +LG+     PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NELRLY+EEGI+VVVS+CPDN+EC+++LS K  GIIP+L  IC+EPN +DARY   LHK + RH  FP    K+ +  F VKH+AG VKYTV GWV RNMD++PE+F    A S   V +E    Y   PA++A T K+  +                + +VGK F+ SM  L+  L +T  +F+RCIKPNA M+ GV + RYV DQL+CLG+LQTCEVLKV 
Sbjct:   76 VVSDMTSLHHIHEAGILYNLRERSKLEGQRPYTFMGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAELAYHQMRL-------------------GTGRKAANQSIVVSGESGAGKTETSKIILTFLTHRSAG-----GVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKH----------------RLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGA-----SDLGLDLKLEGVGSYKILSHGDCTALDGVDDANEFKGVRAAFD-TIRMSEESQLQVWQTLAAMLHLSNLEFNKVDH-QQGEIADISDSETLSTLARLLGVGEGALGKMLTQRVVITRGETFTIQLGLDDANFVRDAIVKSLYEALFLWIVSVINKSLGKGDDGLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYKEEGIDVVVSTCPDNAECLSMLSGKPGGIIPSLDNICAEPNPSDARYLDGLHKAYLRHQDFPQTSQKNMRENFWVKHYAGKVKYTVHGWVERNMDRVPESFGTTLATSKHQVVQEATSKYRQAPASTATTPKTARARKTL-----------VKSTVGKAFLASMQDLNRTLLSTTCNFIRCIKPNAAMQCGVFSNRYVVDQLQCLGILQTCEVLKVG 693          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 7.600e-193
Identity = 361/742 (48.65%), Postives = 458/742 (61.73%), Query Frame = 2
Query:   89 VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTR-------------VAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPP-------------FIGVLDIFGFENFQENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFA------------DVGAGSAMSVCREMIELYGTPAASAPTAKS-GASXXXXXXXXXXXXXXS---------------------------------ARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            VVAD+T L HI+EPGILHNLR R++ R+ +PYT+MGT+LI VNPLR + DPP +EF+D  L+P++PHPYA+AELAY Q++L                   G+G   NQSI+VSGESGAGKTETSKI+++YL+ RT G     G+ GLD R++ESSP+LE+FGNAKTLRN NSSRFGKF+KLQFT   AA                L G  +ETYLLEKSRVL+ + GER+FH+ Y+L+AGA   L+ +LGL G A+ +  L  G C+ ++G+DD A+F +V  A   +  +D A + +VW+++AAVLH++ L F  E+TA+    A P +                   +A L GV    +  LL  RT+  RGE+F K+     A YARDA AKALYE++F WVVR ++ +LG+  G  P             FIGVLDIFGFENF  N  EQLLINFTNESLQD FNKQVF NE+ LY++EGIEV VS CPDNS CI LLSAK  GII  L  +C EP+ +D R+CA+LH  H R   FP VH KD    FMV+H+AG V+YTV+GW+ RN D++PE F              VG             L    AA A  A   GAS  XXXXXXXXXXXX                                  A+P+V +GFMDSM++L+ VL+ T  SFVRCIKPNA+M  G  + RYV +QL+CLG+LQTCEVL+V 
Sbjct:   66 VVADMTALHHINEPGILHNLRVRSDLRNQRPYTYMGTILICVNPLRTVPDPPMSEFLDVSLDPEKPHPYAIAELAYHQMKL-------------------GSGGCTNQSIVVSGESGAGKTETSKIIIKYLAHRTKG-----GVGGLDQRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTKDTAA----------------LAGGYMETYLLEKSRVLSQARGERNFHILYELVAGADPALKRQLGL-GSAQDYHILSQGGCIALDGVDDAAQFRDVVHAFG-TVGLDAATQGQVWRLLAAVLHVACLAFDVEETAEGEVAAVPKEXXXXXXXXXXXXXXXXXQLIAELLGVSARDVSDLLTTRTMTTRGETFVKRSDPAGAAYARDAVAKALYESVFQWVVRTVSDSLGRGGGGKPQAGVEVGAASALPFIGVLDIFGFENFPRNELEQLLINFTNESLQDIFNKQVFVNEISLYKQEGIEVAVSPCPDNSACIRLLSAKPFGIISLLDTVCREPDPSDKRFCAALHARHARDAHFPAVHKKDANDSFMVRHYAGRVRYTVEGWMARNNDRVPEAFQLQLGCMHACATYTVGXXXXXXXXXXXXVLAAREAAEAVAADVLGASSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRSSRSGLGLSTMALAKPTVAQGFMDSMAELARVLELTTCSFVRCIKPNADMAEGQFDRRYVLEQLQCLGILQTCEVLRVG 765          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: A0A6H5JLA2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE)

HSP 1 Score: 526 bits (1355), Expect = 4.840e-175
Identity = 303/549 (55.19%), Postives = 364/549 (66.30%), Query Frame = 2
Query:  194 GTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLR----------YLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTT-LRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKA-----LAISTSMDEARRKE-----------VWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFA 1756
            GT+LIAVNPLRRL DPP   F++RPLNP+ PHPYA+AEL+Y Q+RL     A                  ANQSIIVSGESGAGKTE+SKI+L+          +L+ R+ G     G+  L+ ++V+SSP+LE+FGNAKT+RNNNSSRFGKF+K+QFT                    +L GA +ETYLLEKSRVL    GER+FH+ Y+L+ GA  + L  +L L G  E +  L A  C E+EG+DD A F EV  A     L   T M   RR+            VWK +AAVLH+S + F  +D AQ GEVA   D AAL +++AL GV    L A+L QR VK   E+FTK+L VQ+A   RDA  K+LYEALFLW+VR IN +LG+   S PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NELRLYEEEGI+VVVSSCPDN EC+ LLS+K KGIIP+L  +CSEP  TDARY   LHK + RH  FP   PKD + CF VKH+AG+VKYTV+GWV RNMD IP  FA
Sbjct:    5 GTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKA------------------ANQSIIVSGESGAGKTESSKIILKRDNSAAVKKGFLTHRSVG-----GVTSLEQKVVDSSPILESFGNAKTMRNNNSSRFGKFLKMQFTR----------------DKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQG-VEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQVRRRRGRWLVYVCDEQMVWKALAAVLHMSNVTFEGKDDAQ-GEVAAVKDPAALKKLSALLGVEPSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKLLSSKPKGIIPSLDSVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDSIPVAFA 512          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 1.090e-163
Identity = 325/720 (45.14%), Postives = 394/720 (54.72%), Query Frame = 2
Query:   74 PHRS*VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKRTPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFL---------------------------------------W-----VVRAINVALGQTAGSPPFIGVLDIFGFENFQ-ENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVS 2098
            PH   VVAD+T L HIHE GILHNL +R + +D + YTFMGT+LIAVNPLRRL DPP   F++RPLNP+ PHPYA+AEL+Y Q+RL     A                  ANQSIIVSGESGAGKTE+SKI+L++L+ R+ G     G+  L+ ++V+SSP+LE+FGNAKTLRNNNSSRFGKF+K+QFT                    +L GA +ETYLLEKSRVL    GER+FH+ Y+L+ GA  +     GL                                          ++  +VWK +AAVLH+S + F  +D AQ GEVA   D AAL +++AL GV    L A+L QR VK   E+FTK+L VQ+A   RDA  K+LYE+                                          W     +VR IN +LG+   S PFIGVLDIFGFENF  +N FEQLLINFTNESLQDTFNKQVF NELRLYEEEGI+VVVSSCPDN EC+ +LS+K KGIIP+L  +CSEP  TDARY   LHK + RH  FP   PKD + CF VKH+AG+VKYTV+GWV RNMD IP  FA                           A  G S                                     T  S      P  +        RYV +QL+CLG+LQTCEVLKV 
Sbjct:   61 PHNPKVVADMTSLHHIHEAGILHNLGQRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKA------------------ANQSIIVSGESGAGKTESSKIILKFLTHRSVG-----GVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTR----------------DKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKS-----GL------------------------------------------SKDLQVWKTLAAVLHMSNVAFEGKDDAQ-GEVAAVKDPAALKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYESRTFVEIVDQRTFGGGGGPHVAFRPKCSGAAVAVRAVAVLHGDWRYSCGIVRIINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDSIPVAFA---------------------------ASLGTS-------------------------------------THKSLPSNPPPPPD--------RYVVEQLQCLGILQTCEVLKVG 621          
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Match: A0A3R7D1L3_9STRA (Myosin motor domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D1L3_9STRA)

HSP 1 Score: 511 bits (1316), Expect = 1.030e-161
Identity = 308/715 (43.08%), Postives = 415/715 (58.04%), Query Frame = 2
Query:   74 PHRS*VVADLTGLFHIHEPGILHNLRERTEARDPQPYTFMGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRL-ALRAVAAXXXXXXXXXXXXGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKR-------TPGEEGS------DGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFTTGAAASADGXXXXXXXXGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVFYQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKALAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVA---KPVDVAALTRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKALYEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQENVFEQLLINFTNESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGIIPALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAGSVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTAKSGASXXXXXXXXXXXXXXSARPSVGKGFMDSMSQLSAVLDATASSFVRCIKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKV---SRWKLTEILFSFGFRCCRYMP 2158
            P    V  D+T L+ IHEPG+LHNL ER++    +PYTFM  +LIAVNPLR L DP  +E V+    P  PHPYAVAE+AY+Q+   + R +                    NQS+++SGESGAGKTE+SKI+L++L+ R       TP +         D    LD R++E +P+LEAFGNAKTLRN+NSSRFGKF+KLQFT      ADG           +L GA VETYLLEKSR++    GER+FH+FYQL+ G     + E  L   A+ +  L   +C   E  DD+A +  V   L     MD A++  ++ +VA +LH+  + F  EDTA+ GE A    P  V ALT  AAL G+   A+  ++ +R +  RGE F  +   Q A+YARDA AK++Y  LF W++  +N++LGQ     P+IGVLDIFGFE+FQ N FEQLLIN+TNE LQ TFN QVF  E+ LY+ EGI V     PDN EC+ L++AK  GI+  L    + P  +DA++ A LH+ H ++P FP  HPKD Q  F+V+HFAG V YT+  ++ +N D IP+  AD+   S+  V RE+ +     +  AP  K                      SV   F   M +L   LDAT  +F+RCIKPNA M+ G  + RYV  QLRC G++QT +VLKV   +R    E++ ++     +YMP
Sbjct:   69 PQNPRVTDDMTALYFIHEPGVLHNLSERSKLDGQRPYTFMANVLIAVNPLRPLADPRISEIVNNSNCP--PHPYAVAEMAYQQMVYNSTREMP------------------TNQSVVISGESGAGKTESSKIVLKHLTTRGVFGKKATPAQVDEFAAARHDNSNSLDNRLIEQNPILEAFGNAKTLRNHNSSRFGKFMKLQFT------ADGAF---------KLAGAFVETYLLEKSRLVYQVDGERNFHIFYQLLQGGSVQSKAEFKLTK-AQDYHYLNQSNCYVAEDTDDKANYNAVVHGLGC-VGMDTAKQHTIFSIVAGLLHMGNIDFDEEDTAE-GEAAIVQSPAAVNALTTAAALLGLDSKAMLKVITEREIVTRGELFVVRRNAQNAVYARDAIAKSIYGRLFDWIISQVNISLGQDPQPLPYIGVLDIFGFESFQRNDFEQLLINYTNEVLQRTFNNQVFIAEMELYKREGITVGRIDWPDNRECVELIAAKPSGILQLLDNEAANPKPSDAKFLALLHRTHDKNPFFPRPHPKDMQEMFIVRHFAGCVSYTIGAFIDKNNDTIPKDMADLFLSSSFPVVRELFDEEANESKVAPGKKKTLK------------------SVAAKFTKQMQELVDTLDATRCNFIRCIKPNALMKVGYFDPRYVVGQLRCQGIMQTAQVLKVGLPTRVAYNELVGAYK----KYMP 723          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1697.1.12 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPQ0_ECTSI1.840e-21653.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JRA1_9PHAE2.460e-21653.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS5_ECTSI3.800e-21553.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Q7_ECTSI7.860e-21252.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7J1_9STRA1.150e-21150.71P-loop containing nucleoside triphosphate hydrolas... [more]
D8LHQ0_ECTSI1.400e-21053.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8E2_9STRA7.600e-19348.65P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5JLA2_9PHAE4.840e-17555.19Myosin motor domain-containing protein n=1 Tax=Ect... [more]
D8LMW4_ECTSI1.090e-16345.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3R7D1L3_9STRA1.030e-16143.08Myosin motor domain-containing protein n=1 Tax=Aph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1697contigP-wetherbeei_contig1697:1453..6772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPQ0
PFAMsMyosin_head,PH
Model size2606
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons11
Evalue1.35e-199
EggNOG OGsCOG5022@1|root,KOG0160@2759|Eukaryota
Descriptionmotor activity
Cds size2010
COG categoryZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1697.1.12prot_P-wetherbeei_contig1697.1.12Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1697 1859..6582 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186103.457525-UTR-P-wetherbeei_contig1697:1452..18581683186103.457525-UTR-P-wetherbeei_contig1697:1452..1858Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1697 1453..1858 -
1683186103.5753894-UTR-P-wetherbeei_contig1697:6582..67721683186103.5753894-UTR-P-wetherbeei_contig1697:6582..6772Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1697 6583..6772 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186103.4682736-CDS-P-wetherbeei_contig1697:1858..23651683186103.4682736-CDS-P-wetherbeei_contig1697:1858..2365Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 1859..2365 -
1683186103.4775748-CDS-P-wetherbeei_contig1697:2620..27491683186103.4775748-CDS-P-wetherbeei_contig1697:2620..2749Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 2621..2749 -
1683186103.4869516-CDS-P-wetherbeei_contig1697:2935..30761683186103.4869516-CDS-P-wetherbeei_contig1697:2935..3076Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 2936..3076 -
1683186103.4971054-CDS-P-wetherbeei_contig1697:3297..33821683186103.4971054-CDS-P-wetherbeei_contig1697:3297..3382Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 3298..3382 -
1683186103.507375-CDS-P-wetherbeei_contig1697:3675..38121683186103.507375-CDS-P-wetherbeei_contig1697:3675..3812Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 3676..3812 -
1683186103.5170782-CDS-P-wetherbeei_contig1697:4018..41681683186103.5170782-CDS-P-wetherbeei_contig1697:4018..4168Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 4019..4168 -
1683186103.5266347-CDS-P-wetherbeei_contig1697:4379..45021683186103.5266347-CDS-P-wetherbeei_contig1697:4379..4502Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 4380..4502 -
1683186103.5364096-CDS-P-wetherbeei_contig1697:5039..53531683186103.5364096-CDS-P-wetherbeei_contig1697:5039..5353Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 5040..5353 -
1683186103.5459652-CDS-P-wetherbeei_contig1697:5565..56991683186103.5459652-CDS-P-wetherbeei_contig1697:5565..5699Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 5566..5699 -
1683186103.555482-CDS-P-wetherbeei_contig1697:5912..61451683186103.555482-CDS-P-wetherbeei_contig1697:5912..6145Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 5913..6145 -
1683186103.5653381-CDS-P-wetherbeei_contig1697:6525..65821683186103.5653381-CDS-P-wetherbeei_contig1697:6525..6582Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1697 6526..6582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1697.1.12

>prot_P-wetherbeei_contig1697.1.12 ID=prot_P-wetherbeei_contig1697.1.12|Name=mRNA_P-wetherbeei_contig1697.1.12|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=670bp
MGTLLIAVNPLRRLRDPPEAEFVDRPLNPDEPHPYAVAELAYRQLRLALR
AVAAAAAAGRRPAAGGGTGAVANQSIIVSGESGAGKTETSKIMLRYLSKR
TPGEEGSDGLAGLDARIVESSPVLEAFGNAKTLRNNNSSRFGKFIKLQFT
TGAAASADGGAAATSGGGDVQLVGAAVETYLLEKSRVLAPSAGERSFHVF
YQLIAGAPTTLRTELGLDGGAEQFPTLVAGDCVEVEGMDDQAEFLEVEKA
LAISTSMDEARRKEVWKVVAAVLHLSALQFATEDTAQQGEVAKPVDVAAL
TRVAALAGVGEDALRALLCQRTVKARGESFTKQLTVQEAMYARDATAKAL
YEALFLWVVRAINVALGQTAGSPPFIGVLDIFGFENFQENVFEQLLINFT
NESLQDTFNKQVFRNELRLYEEEGIEVVVSSCPDNSECIALLSAKIKGII
PALTVICSEPNCTDARYCASLHKEHGRHPSFPPVHPKDQQRCFMVKHFAG
SVKYTVDGWVTRNMDKIPETFADVGAGSAMSVCREMIELYGTPAASAPTA
KSGASSGARAGGGGAGGKASARPSVGKGFMDSMSQLSAVLDATASSFVRC
IKPNAEMRAGVCNTRYVADQLRCLGVLQTCEVLKVSRWKLTEILFSFGFR
CCRYMPWVSELLRISGVWL*
back to top

mRNA from alignment at P-wetherbeei_contig1697:1453..6772-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1697.1.12 ID=mRNA_P-wetherbeei_contig1697.1.12|Name=mRNA_P-wetherbeei_contig1697.1.12|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5320bp|location=Sequence derived from alignment at P-wetherbeei_contig1697:1453..6772- (Phaeothamnion wetherbeei SAG_119_79)
CCCAATCACCCGCCGCTTTAACGTCGGTGGAACTCGAAACCGGAAACCTA AAAAAAACACGCAACGTGACAAACCTCACCGATCCTAGGTGGTGGCCGAC CTGACGGGGCTGTTTCACATCCACGAGCCTGGCATCCTCCACAACCTGCG CGAGCGCACTGAGGCGCGTGACCCGCAGCCGTACACCTTCATGGGCACGC TCCTCATCGCCGTCAACCCTTTGCGACGCCTGAGGGACCCGCCCGAGGTG CGTCAAGTTTTGCGTTTTTGCAACGTTTTTCTTCTTAAAGTTGTGTTTCA GCCCTTCCGGGGTGTGTCAGTCATTGCATCTTTTCCCTCTTTTTTGGCTT GGGTTTTGCGTTTCTTTTCTGGGAAGATCTAGGGGCTCCTGTTTGTTATT CAATTGTAGTTTGAGCCGCGATGCTGGACCCGCTGGTCAGTCGGCTCTTG AAACCCGTGTGAGAAACCGAGCCTTGTTTTTCAATTCGTAACTCTTCGCT TATTTCTCTACGGAACCGTTTAAGCGCTGCTCAAACAAACGGCAACGGGA ATCGCAACCACTGTAAACCAAACTTGCGCCGAAAACGACACCGAAAAATG GCTCGGCGGAAACCGATCACCGCACAGGCAGAGTTTGTGGACCGGCCGCT CAACCCAGACGAGCCGCACCCGTACGCCGTCGCCGAGCTGGCCTACCGCC AGCTGCGGCTGGCGCTGCGGGCCGTCGCCGCTGCTGCTGCAGCCGGCCGC CGCCCGGCCGCCGGCGGCGGGACCGGGGCAGTCGCGAACCAGTCTATCAT CGTGTCGGGCGAGTCGGGCGCCGGCAAGACGGAAACAAGCAAGATCATGC TGCGCTATCTGTGAGCTCCTAGTTTGCGACTGGTCACCGACGTTATCGAC ACTCTGCAGACTTTGCTTGGCCTCTATTTAGTTGCAGGTACCCTGCAGTG TGTCAAAATGTTGCCTTTAATCGGATTTCTGTCCGATCTAAAATGCGTGC GTTGTTATTGCCTTGCAATGATTGAATCCGGTTTCAAGAGTTCTTGATTT AACGTTAAGAAGACTTCGTGCAGGTCCAAGCGGACGCCGGGTGAAGAAGG GTCCGATGGGCTGGCGGGGCTGGACGCGCGCATCGTCGAGTCGTCGCCGG TGCTGGAGGCGTTTGGCAACGCTAAGACGCTCCGCAACAACAACTCGTCC CGCTTCGGCAAGTCCTCCGTGTTTTCGTTCTTGTATTTCTTGTTTTTGAG GCATCGCCGGCAAGTCTTAGATTGTGTTCGTCTTTGGTGTGTTTGCTGCA TGGCGCTGCTTTCCGTTGGCCTCGTTGCGCCGGTGGCCTCCAGAAGGCTC AAGGGATCGAGCACGGGAAGTATGAATTTCGACAATTTCTTTTTTTCACT CCGAGACTTTACTGTGCAGGCAAGTTCATCAAGCTGCAGTTTACCACCGG CGCCGCCGCGAGCGCCGACGGCGGCGCCGCCGCGACCAGCGGCGGCGGAG ACGTGCAGCTGGTTGGTGCTGCTGTCGAAACGTATCTACTGGAAAAGAGC CGCGTGCTGGCACCGTCGGCCGGCGAGCGCTCCTTCCACGTCTTCTACCA GCTCATCGCGGGCGCGCCGACGACGCTGCGGACGGAGCTGGGGCTGGACG GCGGGGCGGAGCAGTTCCCGACGCTCGTGGCGGGCGACTGCGTCGAGGTA GAGGGCATGGACGACCAAGCCGAATTTCTTGAGGTGCGGTCGATTAAATC GGTTTCATTGGTTTTTAAAATCGGTTCCTTGTCGTCTTCATCCAGTTCCC TCTTTCCTTTTGTCAGGGTTTCGAGCGTCTGGCAGGTTCAGACTATTGGA GATTCCTGGTTGGTGTTTTGTCTTCTTCTCTCCTTCTCCCCTGTGATGCT TTGTCTGTTGTCTTACGAGTTGGCTGGCGCGGCCGCTGAAGGTGGGCTTT ATGCTGTATTCTTCTTTGTTTTACCTTCCGATCGGTAAAGAAGCACCGCT GCAGTGGCGACTGGGTTGCGGGATTCTTCCCGATCCCTCCCCCAGTCGCC GCTTGTTCAAAGGCAACGCGCTCCTATTCCCCTCTTTCTCTCCTTTCCTG GTTTCGCTCGTGACACATGTGTCCTGTTTGCTGGTGTACCCTTCTCGTCA TAATATCGCCCTTACGGGCTCGACCTTTCCGATATTTTCTCTCTATCTGT TTACCTTTTGTATCTGCCTACCCGACGGTCTTTTCCTTCCGGGGGGCAAC GCCCTTCCACCTGCGGGCAGGTGGAGAAGGCGCTGGCGATCTCGACATCG ATGGACGAAGCACGCCGCAAGGAGGTGTGGAAGGTCGTTGCTGCGGTGCT CCACCTCTCCGCCCTCCAGTTCGCCACCGAGGACACCGCCCAGGTCAGAG AGGGAGCTGCAGGCAGAGGCGAATCGTGATCCGATGTTGCTCTCTCTTCC TCCTCGTACCGCTGCTATGTGTCAGATCGTTTACATGGTTTGCCTTGAGT GGGTGGCGCTGGCTGCTGTCTACCATCTGGCCTTATGCCCGGAAACCGAA TTGGCTCTGACACGGGAAATTATCAGAATGTCCGGTGTAAAACTGATGAT CAAGCAGGGCGAGGTGGCCAAGCCGGTGGACGTGGCGGCGCTGACTCGGG TGGCGGCGCTGGCAGGTGTCGGGGAGGACGCATTGCGGGCGCTGCTCTGC CAACGCACCGTCAAGGCGCGCGGGGAATCCTTTACCAAGCAGCTCACCGT CCAGGTGAGGGAGCGGACGAAATGAGAAAAGAAGAGGATTTCTGTTTTTT GGTTGGTTTGTAGAGCGGTTTGCCGTTGATCGTCTCGACCGTTCCGCTTT GGTTTCTTTCGGCTGTTGGGTCTGTCGCCAGTTTGCTTTTCCTGACAGCA GAGTTTTCCTAATGGTTCTCTTCACGCAAGGAAAACCAAACATCCTGAAA TTCGAAACAGGAGGCGATGTACGCGCGGGATGCGACGGCCAAGGCGCTGT ACGAGGCGCTCTTCCTATGGGTGGTGCGCGCCATCAACGTGGCGCTCGGC CAGACTGCCGGTTCGCCGCCCTTCATTGGCGTCCTCGACATCTTCGGGTG AGTATTTTTTCAAGAAGCTTACCAGAACCTTCTTCTGTCCAAACCTTGCT GTTTGGCTCGACTCCTTTTTTCGCTTGAACGCTCCAACCCCCTTGATCTG TGCGCATTTGTTCTGTAAGTTTGGTTCTGGGAGACCATCCTGTGACCCGT CCAGGTCCATCGCAACTGCAGTGGACTGCTGTGGATTATCCTCTCGCAAG CCGACCAACCGCAACTTCTGTCCTTTCGAGGGCCATAATGCCGATGTATT TGCGTGTCTGAATCTCCGTCCCCTGAATCGCAATTTGCAGATTCGAAAAC TTTCAGGAGAACGTTTTCGAGCAGCTCCTCATAAACTTCACCAATGAGAG CCTTCAGGACACCTTCAACAAGCAGGTGCGGTGGTGAAAGGCAAGAAAAG AGGATGTCATGGCGGGATCTGAAGAACTGTATGCCATATCCTGCCAATAT CTTTTTTTGCTGGCTGCATACCTGCCACTGCCACCCTCGCCCTCACTGCC GCCTGCGCCGCCACATGCCATCTGTGCCGTCATCTGCTGCCGCCTGCCGT CGCCATCGCTGTCACTGCCGTCACCATAAAATGCCGTTTCTGACAGGTGT TCCGGAACGAGCTGCGGCTGTATGAGGAGGAGGGCATCGAGGTGGTAGTG TCCTCGTGCCCCGACAACTCCGAGTGCATCGCGCTGCTGTCGGCCAAGAT CAAGGGCATCATCCCCGCCCTCACCGTAATCTGCTCGGTGGGTGTAATGA AGCGAAGAGAAGAAGCAGGACGGAGGAAGGGACGAGGAGAAAGGTCGAAG AAGGCGGCAAGTCCGCTGTCACTCATTGCCCTAGGCCTATTCGTTTTCCT TTTCGCCCTGTCTCCCCGTCTTCCCGTCCTCTCCTGGGTCGCTCATCTGC CTGGATGTTGCCTCATCTCTCAGGAGCCGAACTGCACGGACGCGCGGTAC TGCGCGTCGCTGCACAAGGAGCATGGACGGCACCCGAGCTTCCCGCCGGT GCACCCCAAGGACCAGCAGCGCTGCTTCATGGTCAAGCACTTCGCCGGCA GCGTGAGTCTAGCCGTCACTGTTTTCGGTCGCCGTGTTGTTCTGCTGCCA GCTTCACGGCATCGGACCTCGCCGAAAAATTAACGTTCTTCTTTGTCACT TGGTCGAACTGTAGCAGGCTGGCTGTCCTGTTTCCCGTGGAAGGCTGCTG CAACTTCCTGCAAGTGAACATCGAACATTAGCGAAACGGATGAAACCGCC AATTTTTCACAGTTACACACCGTCAAAACTGCTGTCGTATATTTGGATAA CAAACAGGTCAAGTACACCGTGGACGGCTGGGTGACACGCAACATGGACA AGATCCCCGAGACGTTCGCCGACGTCGGCGCCGGTTCGGCCATGTCCGTC TGCCGGGAAATGATCGAATTGTACGGCACCCCTGCCGCCTCCGCCCCCAC AGCGAAAAGCGGCGCCAGCAGCGGCGCCCGTGCCGGCGGCGGCGGGGCCG GCGGCAAGGCGTCGGCGCGGCCGAGCGTCGGGAAGGGCTTCATGGACAGC ATGAGCCAGCTGAGCGCGGTGCTGGACGCGACGGCGTCGTCGTTCGTGCG GTGCATCAAGCCCAACGCGGAGATGCGGGCAGGCGTGTGTAACACGCGGT ACGTGGCGGACCAGCTGCGATGCCTCGGCGTGCTCCAGACCTGCGAGGTG TTGAAGGTGAGTCGGTGGAAATTGACCGAGATTCTGTTTTCCTTCGGGTT TCGCTGCTGCCGATATATGCCCTGGGTTAGTGAGTTGCTTCGAATTTCGG GCGTTTGGCTTTGATTTTTGGCGTGGTGGGAGTATTTAATCTCTAAATGT GTACACGGGATCCTGTGTGTAGAAGGCACGGCAAGCGTTCTCGCCGGAGG CAAGGTGCGATCGAACCGGACCAGACGACCAACAGGAAGACGATTTTTTG GGCGGAGTCAGCATGTTCCGTCCGGCCTTGAATCCAAATGTGGCCCATCG AGCGCGTTGTGAAGAGATCCAATGTGGGTGCCAGCGTCACTACTCGAACC AGAACCGATGAGACAGGTGGCTGGCGCCGACGCACCCACAATTACAACTC CTCCAGCAACGCTCGTGGCACCATGTTGTGGCCTTCCCAAGACCAGATGC AATGTGTTTGTGAATTCAAATTTTATTAAAATGAGGAAAATTTGACTTAT CGGTCGTGGGGGCATCCCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1697:1453..6772-

>mRNA_P-wetherbeei_contig1697.1.12 ID=mRNA_P-wetherbeei_contig1697.1.12|Name=mRNA_P-wetherbeei_contig1697.1.12|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2010bp|location=Sequence derived from alignment at P-wetherbeei_contig1697:1453..6772- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCACGCTCCTCATCGCCGTCAACCCTTTGCGACGCCTGAGGGACCC
GCCCGAGGCAGAGTTTGTGGACCGGCCGCTCAACCCAGACGAGCCGCACC
CGTACGCCGTCGCCGAGCTGGCCTACCGCCAGCTGCGGCTGGCGCTGCGG
GCCGTCGCCGCTGCTGCTGCAGCCGGCCGCCGCCCGGCCGCCGGCGGCGG
GACCGGGGCAGTCGCGAACCAGTCTATCATCGTGTCGGGCGAGTCGGGCG
CCGGCAAGACGGAAACAAGCAAGATCATGCTGCGCTATCTGTCCAAGCGG
ACGCCGGGTGAAGAAGGGTCCGATGGGCTGGCGGGGCTGGACGCGCGCAT
CGTCGAGTCGTCGCCGGTGCTGGAGGCGTTTGGCAACGCTAAGACGCTCC
GCAACAACAACTCGTCCCGCTTCGGCAAGTTCATCAAGCTGCAGTTTACC
ACCGGCGCCGCCGCGAGCGCCGACGGCGGCGCCGCCGCGACCAGCGGCGG
CGGAGACGTGCAGCTGGTTGGTGCTGCTGTCGAAACGTATCTACTGGAAA
AGAGCCGCGTGCTGGCACCGTCGGCCGGCGAGCGCTCCTTCCACGTCTTC
TACCAGCTCATCGCGGGCGCGCCGACGACGCTGCGGACGGAGCTGGGGCT
GGACGGCGGGGCGGAGCAGTTCCCGACGCTCGTGGCGGGCGACTGCGTCG
AGGTAGAGGGCATGGACGACCAAGCCGAATTTCTTGAGGTGGAGAAGGCG
CTGGCGATCTCGACATCGATGGACGAAGCACGCCGCAAGGAGGTGTGGAA
GGTCGTTGCTGCGGTGCTCCACCTCTCCGCCCTCCAGTTCGCCACCGAGG
ACACCGCCCAGCAGGGCGAGGTGGCCAAGCCGGTGGACGTGGCGGCGCTG
ACTCGGGTGGCGGCGCTGGCAGGTGTCGGGGAGGACGCATTGCGGGCGCT
GCTCTGCCAACGCACCGTCAAGGCGCGCGGGGAATCCTTTACCAAGCAGC
TCACCGTCCAGGAGGCGATGTACGCGCGGGATGCGACGGCCAAGGCGCTG
TACGAGGCGCTCTTCCTATGGGTGGTGCGCGCCATCAACGTGGCGCTCGG
CCAGACTGCCGGTTCGCCGCCCTTCATTGGCGTCCTCGACATCTTCGGAT
TCGAAAACTTTCAGGAGAACGTTTTCGAGCAGCTCCTCATAAACTTCACC
AATGAGAGCCTTCAGGACACCTTCAACAAGCAGGTGTTCCGGAACGAGCT
GCGGCTGTATGAGGAGGAGGGCATCGAGGTGGTAGTGTCCTCGTGCCCCG
ACAACTCCGAGTGCATCGCGCTGCTGTCGGCCAAGATCAAGGGCATCATC
CCCGCCCTCACCGTAATCTGCTCGGAGCCGAACTGCACGGACGCGCGGTA
CTGCGCGTCGCTGCACAAGGAGCATGGACGGCACCCGAGCTTCCCGCCGG
TGCACCCCAAGGACCAGCAGCGCTGCTTCATGGTCAAGCACTTCGCCGGC
AGCGTCAAGTACACCGTGGACGGCTGGGTGACACGCAACATGGACAAGAT
CCCCGAGACGTTCGCCGACGTCGGCGCCGGTTCGGCCATGTCCGTCTGCC
GGGAAATGATCGAATTGTACGGCACCCCTGCCGCCTCCGCCCCCACAGCG
AAAAGCGGCGCCAGCAGCGGCGCCCGTGCCGGCGGCGGCGGGGCCGGCGG
CAAGGCGTCGGCGCGGCCGAGCGTCGGGAAGGGCTTCATGGACAGCATGA
GCCAGCTGAGCGCGGTGCTGGACGCGACGGCGTCGTCGTTCGTGCGGTGC
ATCAAGCCCAACGCGGAGATGCGGGCAGGCGTGTGTAACACGCGGTACGT
GGCGGACCAGCTGCGATGCCTCGGCGTGCTCCAGACCTGCGAGGTGTTGA
AGGTGAGTCGGTGGAAATTGACCGAGATTCTGTTTTCCTTCGGGTTTCGC
TGCTGCCGATATATGCCCTGGGTTAGTGAGTTGCTTCGAATTTCGGGCGT
TTGGCTTTGA
back to top