mRNA_P-wetherbeei_contig16958.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A6I3WWR7_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3WWR7_9ACTN) HSP 1 Score: 100 bits (248), Expect = 9.300e-26 Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESLLGR 177
LWR+GPASGGDARYWA ADDL Q FRLFPDGNG+G GP+GA +RFRAWKE LLGR
Sbjct: 70 LWRAGPASGGDARYWAGDADDLQRQMIFRLFPDGNGDGLGPSGARHSRFRAWKEDLLGR 128
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A7K1B1D2_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B1D2_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 1.720e-25 Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESLLGR 177
LWR+GPASGGDARYWA RADDL+ Q FRLFPD +G+G GP G TRFR+WKE LLGR
Sbjct: 68 LWRAGPASGGDARYWACRADDLSTQSVFRLFPDNSGDGLGPGGRHHTRFRSWKEDLLGR 126
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A6I3BY26_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3BY26_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 1.890e-24 Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESLLGR 177
LWR+GPA+G DARY A ADDLT HTFRLFPDG+GEG GP+GA RFRAWKE LLGR
Sbjct: 67 LWRAGPATGADARYVAIDADDLTHSHTFRLFPDGSGEGTGPSGARHVRFRAWKEDLLGR 125
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A7X5WU94_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WU94_9ACTN) HSP 1 Score: 96.3 bits (238), Expect = 3.070e-24 Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESLLGR 177
LWR+GPA DARY A RADDLTV HTFRLFPDG+GEG GP+G +RFRAWK+ LLGR
Sbjct: 69 LWRAGPARRADARYVAVRADDLTVHHTFRLFPDGSGEGTGPSGVGHSRFRAWKQDLLGR 127
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A7W1E1M6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1E1M6_9ACTN) HSP 1 Score: 86.3 bits (212), Expect = 1.590e-20 Identity = 38/56 (67.86%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWR+GPA+ DARY A ADDLT HTFRLFPDG GEG GP+G RFR+WKE L
Sbjct: 53 LWRAGPATKADARYVAVAADDLTAHHTFRLFPDGTGEGTGPSGKMHARFRSWKEDL 108
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A6J4IQ52_9ACTN (Uncharacterized protein n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IQ52_9ACTN) HSP 1 Score: 82.8 bits (203), Expect = 6.590e-19 Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWR+GPASGGDARY A ADDLT ++ RLF DG G GP+GA TRFR+WKE L
Sbjct: 69 LWRAGPASGGDARYMALAADDLTERYVLRLFADGTANGVGPSGATHTRFRSWKEDL 124
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A524B7M5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B7M5_9ACTN) HSP 1 Score: 80.9 bits (198), Expect = 3.490e-18 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWRSGPA+ DARY+A A DL Q+TFRLFPDG G+G GP+G RFR+WKE L
Sbjct: 71 LWRSGPATDADARYFAVDAADLARQYTFRLFPDGTGDGVGPSGTRHDRFRSWKEDL 126
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A5Q2RK93_9ACTN (Uncharacterized protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RK93_9ACTN) HSP 1 Score: 79.7 bits (195), Expect = 1.100e-17 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWR+GPA G DARY ADDL TFRLFPDG+G+G GP+G RFRAWKE L
Sbjct: 72 LWRAGPARGADARYVVVHADDLDRHLTFRLFPDGSGDGVGPSGRRHARFRAWKEDL 127
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: A0A6I3FE36_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3FE36_9ACTN) HSP 1 Score: 78.6 bits (192), Expect = 3.710e-17 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWR+GPA G DARY A ADDL TFRL PDG GEG GP+G RFR+WKE+L
Sbjct: 67 LWRAGPAVGADARYAAVAADDLERIWTFRLHPDGEGEGEGPDGVVHARFRSWKEAL 122
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Match: UPI001D11EC4E (hypothetical protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D11EC4E) HSP 1 Score: 75.1 bits (183), Expect = 5.740e-16 Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRAWKESL 168
LWR+GPA G DARY A A+DL+ TFRLFPDG G+G GP A RFR WKE L
Sbjct: 65 LWRAGPAKGADARYVAIDAEDLSTAFTFRLFPDGTGDGDGPT-ARHARFRTWKEDL 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16958.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16958.1.1 >prot_P-wetherbeei_contig16958.1.1 ID=prot_P-wetherbeei_contig16958.1.1|Name=mRNA_P-wetherbeei_contig16958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp LWRSGPASGGDARYWAARADDLTVQHTFRLFPDGNGEGHGPNGAPVTRFRback to top mRNA from alignment at P-wetherbeei_contig16958:3..182+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16958.1.1 ID=mRNA_P-wetherbeei_contig16958.1.1|Name=mRNA_P-wetherbeei_contig16958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig16958:3..182+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16958:3..182+ >mRNA_P-wetherbeei_contig16958.1.1 ID=mRNA_P-wetherbeei_contig16958.1.1|Name=mRNA_P-wetherbeei_contig16958.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig16958:3..182+ (Phaeothamnion wetherbeei SAG_119_79)back to top |