mRNA_P-wetherbeei_contig16944.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI) HSP 1 Score: 149 bits (376), Expect = 9.220e-43 Identity = 70/144 (48.61%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHR 441
+V +DVE+ GVR +DS +WD+H +LSP F+ RT AEL + F +PIA+ + +QL + R P W EG AP G+++ T+ IDVR + +++RDR++WDV+CP NSPE FAR TVADL LP E+E IA+T H+Q++ R
Sbjct: 12 VVCCNVDVEIGGVRFVDSVMWDIHQSSLSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFR 155
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A835YTF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF3_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.030e-36 Identity = 73/152 (48.03%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 1 REFLVPLRIDVELEG-VRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAA---PVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQ 444
R L+P+RID+ EG +R +DS +WD D LSPEAFAA T A+L LP + E P+AR + Q+ P W AA P G++LV +++++R ++YRD+ EWD++ PLNSPEAFA +TVADL LP +E AIA+ + EQ+AN+RQ
Sbjct: 499 RAALLPVRIDLRSEGGLRYVDSLLWDAADAALSPEAFAAATAADLALPRKLEAPLARAIRAQVVTAQATLPVWSGSSGAAAMYPAGEALVPIELELRLGAVLYRDKFEWDMNEPLNSPEAFAARTVADLALPQPMEPAIALALREQLANYRQ 650
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A329S0R6_9STRA (Uncharacterized protein n=39 Tax=Phytophthora TaxID=4783 RepID=A0A329S0R6_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.260e-23 Identity = 58/151 (38.41%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
L+P+R+D+++EG R +DS W+L++++ + E FAA V +L LP F + IA+ + EQ+ ++ P W N A G+SL + I++R +Y DR EWD++ P NSPE FA+ DL L E EA +A+++ EQ+ ++ + L+R G
Sbjct: 135 LIPIRLDIDVEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIREQVEKAKKSLP-W----NEAVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSR-LIREG 279
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A0S6XIH8_BLOB1 (Uncharacterized protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XIH8_BLOB1) HSP 1 Score: 102 bits (254), Expect = 2.240e-22 Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 1
Query: 1 REFLVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLR-----YFARAFPAWLSEGNAAPVG---------DSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNL 450
+E LVPLRID+ELE +RL D+ W+LHD+ +SP+ FA V +L++PA IARQ+H ++ Y+ +PA G AA G D +T+ +++ + D+ EWD++ P NSPE FA Q DL L E AIA ++ EQ + ++L
Sbjct: 229 QEDLVPLRIDIELEKLRLRDTFTWNLHDRTVSPKLFADALVEDLQVPAEHRDNIARQVHRDIKEQLENYYPPVWPA----GEAAEPGLPYWAHKNDDMRITIRLNITVGHITLVDQFEWDINNPQNSPEDFALQMARDLSLSGEFTTAIAHSIREQSQLYTKSL 388
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: V9F6J2_PHYPR (HTH cro/C1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=V9F6J2_PHYPR) HSP 1 Score: 100 bits (249), Expect = 2.540e-22 Identity = 56/151 (37.09%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
L+P+R+D+++EG R +DS W+ ++++ + E FAA V +L LP F + IA+ + EQ+ + P W + A G+SL + I++R +Y DR EWD++ P NSPE FA+ DL L E EA +A+++ EQ+ ++ + L+R G
Sbjct: 138 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-W----SEAVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSR-LIREG 282
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A0W8CBZ9_PHYNI (Chromatin structure-remodeling complex protein BSH n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CBZ9_PHYNI) HSP 1 Score: 100 bits (250), Expect = 3.080e-22 Identity = 54/150 (36.00%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRC 459
L+P+R+D+++EG R +DS W+ ++++ + E FAA V +L LP F + IA+ + EQ+ + P W + A G+SL + I++R +Y DR EWD++ P NSPE FA+ DL L E EA +A+++ EQ+ ++ + +C
Sbjct: 101 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-W----SEAVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRVSKQC 245
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A2D4BHJ2_PYTIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHJ2_PYTIN) HSP 1 Score: 101 bits (252), Expect = 3.480e-22 Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
L+P+R+DV++EG R +DS W+LH+++ + E FAA V +L LP F + IA + Q+ R+ P W N +SL + I++R + +Y DR EWD+S P N PE FA+ DL L E EA IA+++ EQ+ ++ + L+R G
Sbjct: 123 LIPIRLDVDVEGHRFIDSFAWNLHEKDFTYETFAASLVQDLDLPECFLKRIAASIEAQVEKAKRSMP-WXDAMNT----ESLHPIFINLRLQDTLYMDRFEWDLSDPRNDPELFAQTVCDDLGLSGEFEAQIALSIREQLRDYSR-LIREG 267
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A0P1B619_PLAHL (Swi snf-related matrix-associated actin-dependent regulator of n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B619_PLAHL) HSP 1 Score: 100 bits (250), Expect = 5.300e-22 Identity = 58/153 (37.91%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 4 EFLVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
E L+P+R+D+++EG R +DS W+LH++ + E FAA V +L LP F + I + + EQ+ + A+A W + A G+SL + I++R +Y DR EWD++ NSPE FA+ DL L E EA +A+++ EQ+ ++ + L+R G
Sbjct: 135 ELLIPIRLDIDIEGYRFIDSFSWNLHEKEFTFETFAAALVRDLDLPNCFYQRITKSIQEQV-HKAQAVLPW----HEAVTGESLHPIYINLRLCDTIYTDRFEWDLNNTSNSPERFAQVVCEDLGLSGEFEAQVALSIREQLHDYSK-LIREG 281
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A8K1C671_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C671_PYTOL) HSP 1 Score: 100 bits (249), Expect = 8.500e-22 Identity = 58/151 (38.41%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 10 LVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFERPIARQLHEQLRYFARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
LVP+R+DV++EG R +DS W+L++++ + E +AA V +L LP F + IA + Q+ R+ P W + A +SL + I++R +Y DR EWD+S P N PE FA+Q +L L E EA IA+++ EQ+ ++ + L+R G
Sbjct: 138 LVPIRLDVDVEGYRYIDSFSWNLYEKDFTYETYAAALVRDLELPEIFHKRIAGSIEAQVEKAKRSLP-W----HDAVATESLHPIFINIRLNDTLYMDRFEWDLSNPRNDPELFAQQVCEELGLSGEFEAQIALSIREQLRDYSR-LIREG 282
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Match: A0A1X0QZL5_RHIZD (SNF5-domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0QZL5_RHIZD) HSP 1 Score: 99.4 bits (246), Expect = 9.880e-22 Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 1 REFLVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLP-ARFERPIARQLHEQLRYF--ARAFPAWLSEGNAAPVGDSLVTLDIDVRSKWLVYRDRVEWDVSCPLNSPEAFARQTVADLQLPIELEAAIAVTMHEQIANHRQNLLRCG 462
+E LVP+RID+E+EG +L D+ W+L++ ++ E FA +LRLP + F PIA+ + EQL + + A P E +++ LDI V +K L+ D+ EWDV CP NSPE FA + V +L L E + AIA + EQI ++++LL G
Sbjct: 117 QECLVPIRIDLEIEGYKLRDTFTWNLNETLITHEQFAEVICLDLRLPPSLFVEPIAKSIKEQLEDYNLSAATPQETDELK------TIIKLDITVGNKELI--DQFEWDVGCPKNSPEEFAEKLVTELGLGGEFKTAIAHLIREQIHVYKKSLLVLG 265 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16944.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16944.1.1 >prot_P-wetherbeei_contig16944.1.1 ID=prot_P-wetherbeei_contig16944.1.1|Name=mRNA_P-wetherbeei_contig16944.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp REFLVPLRIDVELEGVRLLDSAVWDLHDQNLSPEAFAARTVAELRLPARFback to top mRNA from alignment at P-wetherbeei_contig16944:575..1036+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16944.1.1 ID=mRNA_P-wetherbeei_contig16944.1.1|Name=mRNA_P-wetherbeei_contig16944.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig16944:575..1036+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16944:575..1036+ >mRNA_P-wetherbeei_contig16944.1.1 ID=mRNA_P-wetherbeei_contig16944.1.1|Name=mRNA_P-wetherbeei_contig16944.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig16944:575..1036+ (Phaeothamnion wetherbeei SAG_119_79)back to top |