mRNA_P-wetherbeei_contig16936.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16936.2.1
Unique NamemRNA_P-wetherbeei_contig16936.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A536WTK7_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WTK7_9PROT)

HSP 1 Score: 405 bits (1040), Expect = 5.140e-139
Identity = 187/270 (69.26%), Postives = 221/270 (81.85%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKP----AAADAKKK 801
            PGG FGMD  D   WM +GGG E+  +F+Q  LKLN+H +P  P+ PQAFGWFKRPIKNLADFK MKCRQTG+ A++F RMGMTT+NMPGGEI+PAAQRGVIDCAEWVGG+EDLRLG H V+K+HYTPGMHEN T+GE+VFN DVWKGL+  QQEII+SAA +  + W+A WQ+QNADA+KELQEKHGV +LRTPP+IL+ +LK WD    EE+ KN  FKK+LDSQ+A+A++VVPAKRFM PPYSFAANYYWPEG      A AD KKK
Sbjct:  109 PGGTFGMDMIDAFGWMQHGGGIELAQEFFQKELKLNIHWLPILPSGPQAFGWFKRPIKNLADFKGMKCRQTGMAAEVFQRMGMTTVNMPGGEIIPAAQRGVIDCAEWVGGVEDLRLGFHNVWKYHYTPGMHENVTIGEVVFNMDVWKGLSPTQQEIIKSAANETFIVWWAKWQRQNADAIKELQEKHGVHILRTPPDILLEFLKTWDTIAAEESQKNPFFKKVLDSQRAYASLVVPAKRFMFPPYSFAANYYWPEGGTKGGAAKADVKKK 378          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A1F4EV14_9PROT (Extracytoplasmic solute receptor protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EV14_9PROT)

HSP 1 Score: 397 bits (1021), Expect = 5.560e-136
Identity = 184/269 (68.40%), Postives = 214/269 (79.55%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAAAD---AKKK 801
            P G  GMDH D+L WM+ GGG +MW DFYQN LKLNV V P  P SPQA GWFKRPIKNLADFK MKCRQTGI A+I+ +MGMTT+NMPGGEI+P+AQRGVIDCAEWVGG ED+RLGLH V+K+HYTPGMHE+ ++GE++ N DVWKGLT  QQE +RSA  +  V W+  WQ+QNADA+ E++ KHG ++LRTPPEIL A+ KAWD    EE+ KN  FKK+LDSQ+AWAA VVPAKRFM PPYSFAANYYWPE    AA    AKKK
Sbjct:  120 PAGIAGMDHMDFLGWMYEGGGLDMWWDFYQNVLKLNVVVFPILPASPQALGWFKRPIKNLADFKGMKCRQTGIVAEIYQKMGMTTVNMPGGEIVPSAQRGVIDCAEWVGGAEDMRLGLHQVWKYHYTPGMHESASIGELIINADVWKGLTPQQQEAVRSATTETFVRWWVKWQRQNADAIDEMRTKHGTQILRTPPEILTAFFKAWDEIAKEESAKNPFFKKVLDSQRAWAARVVPAKRFMFPPYSFAANYYWPEDVRKAAPKPAAKKK 388          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A7C2UGR0_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UGR0_9PROT)

HSP 1 Score: 393 bits (1009), Expect = 2.910e-134
Identity = 180/267 (67.42%), Postives = 215/267 (80.52%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAA-ADAKKK 801
            P GPFGMD  D++ W++ GGG E+W +FYQ  LKLNV   P  P+ PQAFGWFKRPIKNLADFK MKCRQTGI A+IF +MGM T+NMPGGEI+PAAQRGVIDCAEWVGG+EDLRLGL  VYK+HYTPGMHE + +GE++ N DVWK L A QQE IRSA  +  V W+  WQKQNADA+ E++ K+G ++LRTPP+IL+A+LKAWD    EEA KN  FKK+L+SQ+A+A+ VVPAKRF+ PPYSFAANYYWPE KPAA  D KK+
Sbjct:  115 PAGPFGMDTMDFMGWLYEGGGLELWWEFYQKELKLNVVAFPILPSGPQAFGWFKRPIKNLADFKGMKCRQTGIVAEIFQKMGMQTVNMPGGEIVPAAQRGVIDCAEWVGGIEDLRLGLPQVYKYHYTPGMHEPSIVGELIINADVWKSLPAQQQEAIRSATTETFVRWWVKWQKQNADAMDEMRTKYGTQILRTPPDILVAFLKAWDEIAKEEAAKNPFFKKVLESQRAYASKVVPAKRFLFPPYSFAANYYWPEEKPAAKGDGKKR 381          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A537A575_9PROT (Extracytoplasmic solute receptor protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A575_9PROT)

HSP 1 Score: 391 bits (1005), Expect = 9.630e-134
Identity = 169/265 (63.77%), Postives = 218/265 (82.26%), Query Frame = 1
Query:    1 PPGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAAADAK 795
            PPGGPFGMDH D+L W++ GGG EMW +FYQN LKLN+ V P HP+SPQA GWFK+P+K++ADFK +KCRQTG+NA+++ ++G + +NM GGEI+PAAQRGVIDCAEWVGG+EDLRLGL++V+K+HYTPGMHENN++GE+ FN DVWKG T  QQE + SA +D  ++W   WQK NADA++E+ +KHGV++LRTPP+IL+A LKAWD    E + K+ VFKK+ +SQ+A+AA VVPAKR+M PPYSFAANYYWP+     +D K
Sbjct:  106 PPGGPFGMDHMDWLGWLYVGGGLEMWREFYQNDLKLNLIVWPAHPSSPQALGWFKKPLKSVADFKGLKCRQTGLNAEVYAKLGQSVVNMAGGEIVPAAQRGVIDCAEWVGGVEDLRLGLYSVFKYHYTPGMHENNSVGELGFNLDVWKGFTPAQQEAVNSAVKDTFITWLTKWQKDNADAIEEMIKKHGVRILRTPPDILLASLKAWDEVAAENSAKSPVFKKVYESQRAYAAKVVPAKRYMFPPYSFAANYYWPQEGAPGSDKK 370          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A537BVT7_9PROT (Extracytoplasmic solute receptor protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BVT7_9PROT)

HSP 1 Score: 391 bits (1004), Expect = 1.410e-133
Identity = 178/266 (66.92%), Postives = 211/266 (79.32%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAAADAKKK 801
            PGG FGMD  D L WM NGGG E+  +F+Q  LKLN+   P  P+ PQAFGWFKRPIKNLADFK MKCRQTG+ A++F RMGM T+NMPGGEI+P+AQRGVIDCAEWVGG+EDLRLG   V+K+HYTPG+HEN T+GEIV NGDVWK L+   QEII+SAA +  + W+A WQ+QNADA+KELQEKHGV++LRTPP+ILI +LK WD    EE  KN  FKK+ DSQ+A+A++VVPAKRFM PPYSF ANYYWPE +P A     K
Sbjct:  110 PGGTFGMDMIDALGWMQNGGGLELAQEFFQKELKLNIQWFPILPSGPQAFGWFKRPIKNLADFKGMKCRQTGMAAEVFQRMGMQTVNMPGGEIIPSAQRGVIDCAEWVGGVEDLRLGFQNVWKYHYTPGVHENVTIGEIVLNGDVWKSLSPTHQEIIKSAANETFLVWWAKWQRQNADAIKELQEKHGVRILRTPPDILIEFLKTWDTIAKEEGAKNPFFKKVHDSQRAYASLVVPAKRFMFPPYSFVANYYWPEAQPGATKVSAK 375          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A1F3ZTG4_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZTG4_9PROT)

HSP 1 Score: 391 bits (1004), Expect = 1.790e-133
Identity = 182/268 (67.91%), Postives = 216/268 (80.60%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEG-KPAA-ADAKKK 801
            P GPFGMD  D++ W++ GGG ++W DFYQ  LKLNV   P  P+ PQAFGWFKRPIKNLADFK MKCRQTGI A+IF +MGM T+NMPGGEI+P+AQRGVIDCAEWVGG+EDLRLGL  V+K+HYTPGMHE + +GE++ N DVWK L A QQE IRSA  +  V W+  WQKQNADA++E++ KHG ++LRTPP+ILIA+LKAWD    EE+ KN  FKK+LDSQ+A+A+ VVPAKRFM PPYSFAANYYWPE  KPAA  D KKK
Sbjct:  116 PAGPFGMDTMDFMGWLYEGGGLDLWWDFYQKELKLNVIAFPILPSGPQAFGWFKRPIKNLADFKGMKCRQTGIVAEIFQKMGMQTVNMPGGEIVPSAQRGVIDCAEWVGGIEDLRLGLPQVWKYHYTPGMHEPSIVGELIINADVWKALPAQQQEAIRSATSETFVRWWIKWQKQNADAIEEMRVKHGTQILRTPPDILIAFLKAWDEIAKEESAKNPFFKKVLDSQRAYASKVVPAKRFMFPPYSFAANYYWPEKPKPAAKGDGKKK 383          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A1F4EUT9_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EUT9_9PROT)

HSP 1 Score: 390 bits (1002), Expect = 2.400e-133
Identity = 181/266 (68.05%), Postives = 219/266 (82.33%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAAADAKKK 801
            PGG FGMD  D + W+ +GGG E++N+FYQ  LKLNV V+P  P  PQAFGWFKRPIKNLADFK MKCRQTG+ A++F +MGM T+NMPGGEI+P+AQRGVIDCAEWVGG EDLR+G H V+K+HYTPGMHEN T+GE+V NGDVWK L+A  QE+I+SAA +A + W+A  Q+QNADALKE+QEKHGV++LRTPPEILIA+LKAWD    EE+ K+  FKK+ DSQ+A A++VVPAKRF +PPYSFAANYY+PE     A AKKK
Sbjct:  106 PGGTFGMDFIDAMGWLHHGGGLELYNEFYQKELKLNVIVLPILPAGPQAFGWFKRPIKNLADFKGMKCRQTGMAAEVFQKMGMQTVNMPGGEIIPSAQRGVIDCAEWVGGAEDLRVGFHNVWKYHYTPGMHENVTIGELVINGDVWKSLSAPHQEMIKSAANEAFLIWWAKVQRQNADALKEMQEKHGVRILRTPPEILIAFLKAWDEIAKEESAKDPFFKKVHDSQRAHASLVVPAKRFYYPPYSFAANYYFPETGTKPAAAKKK 371          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A537GE57_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537GE57_9PROT)

HSP 1 Score: 390 bits (1002), Expect = 3.730e-133
Identity = 169/256 (66.02%), Postives = 210/256 (82.03%), Query Frame = 1
Query:    1 PPGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPE 768
            PPGGPFGMDH DYL W++ GGG EMW DFYQN LKLNV   P HP+SPQA GWFK+P+K++ADFK MKCRQTG+NA+++ ++G + +NMPGGEI+PAAQRGVIDCAEWVGG+EDLRLGL  V+K+HYTPGMHENN++GE+ FN DVWK  T  QQE   SA +D  ++W   WQKQNADA++E+ +KHG ++LRTPP+IL+A LKAWD    E + K+  FKK+ +SQ+A+AA VVPAKR+M PPYSFAANYYWP+
Sbjct:  111 PPGGPFGMDHMDYLGWLYVGGGLEMWRDFYQNDLKLNVIPFPAHPSSPQALGWFKKPLKSVADFKGMKCRQTGLNAEVYAKLGQSVVNMPGGEIVPAAQRGVIDCAEWVGGVEDLRLGLPQVFKYHYTPGMHENNSIGELGFNLDVWKSFTPQQQEAANSAVKDTFITWITRWQKQNADAMEEMVQKHGARILRTPPDILLASLKAWDEVAKENSDKSPTFKKVYESQRAYAAKVVPAKRYMFPPYSFAANYYWPQ 366          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A1F4CKK8_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CKK8_9PROT)

HSP 1 Score: 387 bits (993), Expect = 8.390e-132
Identity = 178/267 (66.67%), Postives = 214/267 (80.15%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGKPAA-ADAKKK 801
            P GPFGMD  D++ W++ GGG E+W DFYQ  LKLNV   P  P  PQAFGWFKRPIKNLADFK MKCRQTGI A++F RMGM T+NMPGGEI+P+AQRGVIDCAEWVGG+EDLRLGL  V+K+HYTPGMHE + +GE++ N DVWKGLT  QQE IRSAA +  + W+  WQKQNA+A++E++ K+G ++LRTP +ILIA+LKAWD    EE+ KN  FKK+L+SQ+A+A  VVPAKRFM PPYSFAANYYWPE K  A A+ KKK
Sbjct:  117 PAGPFGMDTMDFMGWVYEGGGLELWWDFYQKELKLNVIAFPILPAGPQAFGWFKRPIKNLADFKGMKCRQTGIVAEVFKRMGMQTVNMPGGEIVPSAQRGVIDCAEWVGGIEDLRLGLPQVWKYHYTPGMHEPSVVGELIINADVWKGLTTQQQEAIRSAATETFMRWWVKWQKQNAEAIEEMRVKYGTQILRTPRDILIAFLKAWDEIAKEESAKNPFFKKVLESQRAYAGKVVPAKRFMFPPYSFAANYYWPETKARAKAEGKKK 383          
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Match: A0A521VIE7_9PROT (Extracytoplasmic solute receptor protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VIE7_9PROT)

HSP 1 Score: 386 bits (992), Expect = 1.510e-131
Identity = 180/267 (67.42%), Postives = 213/267 (79.78%), Query Frame = 1
Query:    4 PGGPFGMDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRPIKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAEWVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEIIRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAWDGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEGK---PAAADAK 795
            P GPFGMDH D+L WM+  GG +M+ D YQ  +KLNV   P  P+SPQAFGWFKRPIKNLADFK MKCRQTGI A+IFT+MGM T+NMPGGEI+P+AQRGVIDCAEWVGG+EDLRLGL  V+K+HY PGMHE + +GE++ N DVWK L A QQE IRSA  +  V W+  WQKQNADA++E++ KHG ++LRTPP+ILIA+LKAWD    EE+ KN  FKK+LDSQ+ +AA VVPAKRFM+PPYSFAANYYWPE     PA A AK
Sbjct:  118 PAGPFGMDHMDFLGWMYEAGGLDMYWDLYQKEMKLNVIAFPILPSSPQAFGWFKRPIKNLADFKGMKCRQTGIVAEIFTKMGMATVNMPGGEIVPSAQRGVIDCAEWVGGVEDLRLGLPQVFKYHYVPGMHEPSVIGELLINADVWKALPAQQQEAIRSATTETLVRWWVKWQKQNADAIEEMRTKHGTQILRTPPDILIAFLKAWDEIAKEESAKNPFFKKVLDSQRDYAAKVVPAKRFMNPPYSFAANYYWPEDVRKGPAKAAAK 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16936.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536WTK7_9PROT5.140e-13969.26Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A1F4EV14_9PROT5.560e-13668.40Extracytoplasmic solute receptor protein n=2 Tax=u... [more]
A0A7C2UGR0_9PROT2.910e-13467.42Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A537A575_9PROT9.630e-13463.77Extracytoplasmic solute receptor protein n=2 Tax=B... [more]
A0A537BVT7_9PROT1.410e-13366.92Extracytoplasmic solute receptor protein n=2 Tax=B... [more]
A0A1F3ZTG4_9PROT1.790e-13367.91Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A1F4EUT9_9PROT2.400e-13368.05Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A537GE57_9PROT3.730e-13366.02Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A1F4CKK8_9PROT8.390e-13266.67Extracytoplasmic solute receptor protein n=1 Tax=B... [more]
A0A521VIE7_9PROT1.510e-13167.42Extracytoplasmic solute receptor protein n=2 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16936contigP-wetherbeei_contig16936:668..1471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1038859.AXAU01000007_gene5808
PFAMsDctP
Model size804
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.07e-115
EggNOG OGsCOG4663@1|root,COG4663@2|Bacteria,1MUXI@1224|Proteobacteria,2TQVW@28211|Alphaproteobacteria
DescriptionPart of the tripartite ATP-independent periplasmic (TRAP) transport system
Cds size783
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186102.5288703-CDS-P-wetherbeei_contig16936:667..14501683186102.5288703-CDS-P-wetherbeei_contig16936:667..1450Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16936 668..1450 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186102.5381732-UTR-P-wetherbeei_contig16936:1450..14711683186102.5381732-UTR-P-wetherbeei_contig16936:1450..1471Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16936 1451..1471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16936.2.1prot_P-wetherbeei_contig16936.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16936 668..1450 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16936.2.1

>prot_P-wetherbeei_contig16936.2.1 ID=prot_P-wetherbeei_contig16936.2.1|Name=mRNA_P-wetherbeei_contig16936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
MDHSDYLSWMWNGGGTEMWNDFYQNTLKLNVHVIPGHPTSPQAFGWFKRP
IKNLADFKTMKCRQTGINAQIFTRMGMTTINMPGGEILPAAQRGVIDCAE
WVGGLEDLRLGLHTVYKFHYTPGMHENNTMGEIVFNGDVWKGLTAVQQEI
IRSAARDAHVSWYAAWQKQNADALKELQEKHGVKVLRTPPEILIAYLKAW
DGFVDEEAGKNAVFKKILDSQKAWAAVVVPAKRFMHPPYSFAANYYWPEG
KPAAADAKKK*
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mRNA from alignment at P-wetherbeei_contig16936:668..1471-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16936.2.1 ID=mRNA_P-wetherbeei_contig16936.2.1|Name=mRNA_P-wetherbeei_contig16936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig16936:668..1471- (Phaeothamnion wetherbeei SAG_119_79)
CCCCCGGGCGGCCCCTTCGGCATGGACCACTCGGACTACCTCAGCTGGAT GTGGAACGGCGGCGGGACCGAGATGTGGAACGACTTCTACCAGAACACGC TCAAGCTGAACGTGCACGTGATCCCGGGCCACCCGACCAGCCCGCAGGCC TTCGGCTGGTTCAAGCGCCCGATCAAGAACCTGGCCGACTTCAAGACCAT GAAATGCCGCCAGACCGGCATCAACGCCCAGATCTTCACGCGCATGGGGA TGACCACGATCAACATGCCCGGCGGCGAGATCCTGCCCGCCGCGCAGCGC GGCGTGATCGACTGCGCCGAGTGGGTCGGCGGCCTCGAGGACCTGCGCCT GGGCCTGCACACGGTGTACAAGTTCCACTACACGCCCGGCATGCACGAGA ACAACACCATGGGCGAGATCGTGTTCAACGGCGACGTCTGGAAAGGCCTG ACGGCCGTGCAGCAGGAGATCATCCGTTCCGCCGCGCGTGATGCGCACGT GTCCTGGTACGCCGCCTGGCAGAAGCAGAACGCCGACGCGCTGAAGGAGC TGCAGGAAAAGCACGGCGTGAAGGTCCTGCGCACCCCGCCCGAGATCCTC ATCGCCTACCTCAAGGCCTGGGACGGGTTCGTCGACGAGGAAGCCGGCAA GAACGCGGTCTTCAAGAAGATCCTCGACTCGCAGAAGGCCTGGGCCGCGG TGGTCGTGCCGGCCAAGCGCTTCATGCACCCGCCCTACTCGTTCGCCGCG AACTACTACTGGCCCGAAGGCAAGCCGGCGGCCGCGGACGCGAAGAAGAA ATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16936:668..1471-

>mRNA_P-wetherbeei_contig16936.2.1 ID=mRNA_P-wetherbeei_contig16936.2.1|Name=mRNA_P-wetherbeei_contig16936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig16936:668..1471- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCACTCGGACTACCTCAGCTGGATGTGGAACGGCGGCGGGACCGA
GATGTGGAACGACTTCTACCAGAACACGCTCAAGCTGAACGTGCACGTGA
TCCCGGGCCACCCGACCAGCCCGCAGGCCTTCGGCTGGTTCAAGCGCCCG
ATCAAGAACCTGGCCGACTTCAAGACCATGAAATGCCGCCAGACCGGCAT
CAACGCCCAGATCTTCACGCGCATGGGGATGACCACGATCAACATGCCCG
GCGGCGAGATCCTGCCCGCCGCGCAGCGCGGCGTGATCGACTGCGCCGAG
TGGGTCGGCGGCCTCGAGGACCTGCGCCTGGGCCTGCACACGGTGTACAA
GTTCCACTACACGCCCGGCATGCACGAGAACAACACCATGGGCGAGATCG
TGTTCAACGGCGACGTCTGGAAAGGCCTGACGGCCGTGCAGCAGGAGATC
ATCCGTTCCGCCGCGCGTGATGCGCACGTGTCCTGGTACGCCGCCTGGCA
GAAGCAGAACGCCGACGCGCTGAAGGAGCTGCAGGAAAAGCACGGCGTGA
AGGTCCTGCGCACCCCGCCCGAGATCCTCATCGCCTACCTCAAGGCCTGG
GACGGGTTCGTCGACGAGGAAGCCGGCAAGAACGCGGTCTTCAAGAAGAT
CCTCGACTCGCAGAAGGCCTGGGCCGCGGTGGTCGTGCCGGCCAAGCGCT
TCATGCACCCGCCCTACTCGTTCGCCGCGAACTACTACTGGCCCGAAGGC
AAGCCGGCGGCCGCGGACGCGAAGAAGAAATGA
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