prot_P-wetherbeei_contig16924.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16924.2.1
Unique Nameprot_P-wetherbeei_contig16924.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length139
Homology
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 230 bits (587), Expect = 8.560e-72
Identity = 105/131 (80.15%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSAAIEQRNQDATCYCG +DE  TE++LWELM+QAGPVV+VHMPKDKVT  HQGYGF EFR+EEDA+YAIK++NMVKLFGKP+RVNKAS D+K+ DVGANLF+GQLDP+VDEKLLYDTFSAFGF+   PKV
Sbjct:    1 MSAAIEQRNQDATCYCGNLDEAATEELLWELMIQAGPVVNVHMPKDKVTNTHQGYGFVEFRSEEDAEYAIKILNMVKLFGKPLRVNKASSDRKAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKV 131
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A7S2SH37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH37_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.260e-71
Identity = 105/131 (80.15%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSAAIEQRNQDATCYCG +D++V E++LWELM+QAGPVVS+HMPKDKVT  HQG+GF EFR+EEDADYAIK+MNMVKLF KPIRVNKASQD+K+MDVGANLF+G LD  VDEKLLYDTFSAFG +  QPKV
Sbjct:    1 MSAAIEQRNQDATCYCGNLDDQVEEELLWELMLQAGPVVSLHMPKDKVTNSHQGFGFVEFRSEEDADYAIKIMNMVKLFDKPIRVNKASQDRKTMDVGANLFIGNLDAQVDEKLLYDTFSAFGGLTDQPKV 131
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A7S1XM10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM10_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.630e-70
Identity = 101/130 (77.69%), Postives = 118/130 (90.77%), Query Frame = 0 
Query:    2 SAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            SA +E RNQDATCYCG +DEKVTE+ILWELM+QAGP+ S++MPKDKV+G HQGYGF EFR  +DADYA KVMNMVK++GKPIRVNKASQD+KSM+VGANLF+G LDPDVDEKLLYDTFSAFG ++T PK+
Sbjct:    3 SANLEHRNQDATCYCGNLDEKVTEEILWELMLQAGPIQSIYMPKDKVSGNHQGYGFVEFRGTDDADYAHKVMNMVKVYGKPIRVNKASQDRKSMEVGANLFIGGLDPDVDEKLLYDTFSAFGGIITTPKI 132
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 7.950e-70
Identity = 102/131 (77.86%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSA+IEQRNQDATCY G +D  VTE +LWELM+QAGPV +VHMPKDK+TG HQG+GF EFR+E+DA+YAIK+MNMVKLFGKP+RVNKASQD+K+ DVGANLF+GQLDPDVDEK+LYDTFSAFGF+   PKV
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKV 131
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 2.210e-68
Identity = 102/131 (77.86%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSA+IEQRNQDATCY G +D  VTE +LWELM+QAGPV +VHMPKDK+TG HQG+GF EFR+E+DA+YAIK+MNMVKLFGKP+RVNKASQD+K+ DVGANLF+GQLDPDVDEK+LYDTFSAFGF+   PKV
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKV 131
[Close]
BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A7S2APL4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APL4_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.770e-67
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSAAIEQRNQDATCYCG +DE+V E++LWELM+QAGPVVS+HMPKDKVT  HQGYGF EFR+EEDADYAIKVMNMVKLFGKPIRVNKASQDKK++DVGANLF+G LD DVDEKLLYDTFSAFG +   PKV
Sbjct:    1 MSAAIEQRNQDATCYCGNLDEQVDEELLWELMLQAGPVVSLHMPKDKVTASHQGYGFVEFRSEEDADYAIKVMNMVKLFGKPIRVNKASQDKKTLDVGANLFIGNLDSDVDEKLLYDTFSAFGGITHTPKV 131
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A5B6YLX9_DAVIN (Putative splicing factor 3B subunit 4 (Fragment) n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YLX9_DAVIN)

HSP 1 Score: 211 bits (538), Expect = 3.600e-67
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = 0 
Query:    7 QRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            +RNQDAT Y G +D ++TE++LWEL VQAGPVV+V++PKD+VT  HQGYGF EFR+EEDADYAIKV+NM+KL+GKPIRVNKASQDKKS+DVGANLFVG LDPDVDEKLLYDTFSAFG +VT PK+
Sbjct:   28 ERNQDATAYVGNLDPQITEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKI 152
[Close]
BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A7S3MGC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGC9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.320e-66
Identity = 95/131 (72.52%), Postives = 117/131 (89.31%), Query Frame = 0 
Query:    1 MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            MSAAIEQRNQ+ATCY G +DEKV E++LWE M+Q GPVV+V MPKDKV+G++ GYGF E+R+E+DADYAIKV+NMVKL+ KP++VNKASQDKK+++VGANLF+G LDPDVDEKLLYDTFSAFG +   PK+
Sbjct:    1 MSAAIEQRNQEATCYVGNLDEKVNEELLWEFMLQVGPVVNVFMPKDKVSGKYLGYGFVEYRSEDDADYAIKVLNMVKLYFKPVKVNKASQDKKNIEVGANLFIGNLDPDVDEKLLYDTFSAFGGITQTPKI 131
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BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A2H5NRF6_CITUN (Uncharacterized protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NRF6_CITUN)

HSP 1 Score: 211 bits (538), Expect = 2.680e-66
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = 0 
Query:    7 QRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            +RNQDAT Y G +D +VTE++LWEL VQAGPVV+V++PKD+VT  HQGYGF EFR+EEDADYAIKV+NM+KL+GKPIRVNKASQDKKS+DVGANLF+G LDPDVDEKLLYDTFSAFG +VT PK+
Sbjct:   20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
[Close]
BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Match: A0A5B6YN42_DAVIN (Putative splicing factor 3B subunit 4 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YN42_DAVIN)

HSP 1 Score: 211 bits (538), Expect = 3.310e-66
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = 0 
Query:    7 QRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTGQHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGANLFVGQLDPDVDEKLLYDTFSAFGFVVTQPKV 131
            +RNQDAT Y G +D ++TE++LWEL VQAGPVV+V++PKD+VT  HQGYGF EFR+EEDADYAIKV+NM+KL+GKPIRVNKASQDKKS+DVGANLFVG LDPDVDEKLLYDTFSAFG +VT PK+
Sbjct:   20 ERNQDATAYVGNLDPQITEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16924.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPU5_9STRA8.560e-7280.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SH37_9STRA2.260e-7180.15Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1XM10_9STRA1.630e-7077.69Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6H5KI11_9PHAE7.950e-7077.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT41_ECTSI2.210e-6877.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2APL4_9STRA2.770e-6783.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5B6YLX9_DAVIN3.600e-6777.60Putative splicing factor 3B subunit 4 (Fragment) n... [more]
A0A7S3MGC9_9STRA1.320e-6672.52Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2H5NRF6_CITUN2.680e-6677.60Uncharacterized protein n=1 Tax=Citrus unshiu TaxI... [more]
A0A5B6YN42_DAVIN3.310e-6677.60Putative splicing factor 3B subunit 4 n=1 Tax=Davi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 13..86
e-value: 3.8E-21
score: 86.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 15..84
e-value: 4.0E-15
score: 55.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 12..90
score: 15.579141
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..98
e-value: 5.5E-25
score: 89.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 99..138
e-value: 4.4E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 6..131
NoneNo IPR availablePANTHERPTHR15241:SF330SPLICING FACTOR 3B SUBUNIT 4coord: 6..131
IPR034158SF3B4, RNA recognition motif 1CDDcd12334RRM1_SF3B4coord: 14..87
e-value: 2.94922E-54
score: 162.763
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 11..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16924contigP-wetherbeei_contig16924:452..1320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16924.2.1mRNA_P-wetherbeei_contig16924.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16924 452..1320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16924.2.1 ID=prot_P-wetherbeei_contig16924.2.1|Name=mRNA_P-wetherbeei_contig16924.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
MSAAIEQRNQDATCYCGGMDEKVTEDILWELMVQAGPVVSVHMPKDKVTG
QHQGYGFTEFRTEEDADYAIKVMNMVKLFGKPIRVNKASQDKKSMDVGAN
LFVGQLDPDVDEKLLYDTFSAFGFVVTQPKVGYSQQRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034158SF3B4_RRM1
IPR035979RBD_domain_sf