mRNA_P-wetherbeei_contig1692.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: D8LDP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP0_ECTSI) HSP 1 Score: 129 bits (323), Expect = 6.400e-34 Identity = 75/212 (35.38%), Postives = 111/212 (52.36%), Query Frame = 2
Query: 74 RESKNPFYVTSSEL--STTTTERRFNAPTVYKPSPRND-LGAGIDWSFMYTKESEQFGIGVPQSDSKLSAAIALQSSFAATARRRHCTRREPGACANDAQRGVAGAGDSXXXXXXXXXXXXEMRRQLPSDQASLDKLLERFDHRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELDPQFL 700
R+S NPF+ T++ ++ + ++AP V++ P+ D + AGIDWSFMYT R ++P D+ + D+LL+ F H ++ENPLY+TT N+IG+++PTGATFTFER ARQQGFSNSFN +++RDMGL+T++TRSN+H +L+PQF+
Sbjct: 6 RDSSNPFFTTTNSRIGNSACQKHEYDAPPVFRKVPKVDRVAAGIDWSFMYT------------------------------------------------------------------------RNRVPEDKDARDELLKNFKHTSKKENPLYSTTNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDDLNPQFM 145
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A6V2SUD9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2SUD9_HETAK) HSP 1 Score: 127 bits (320), Expect = 1.270e-32 Identity = 81/216 (37.50%), Postives = 121/216 (56.02%), Query Frame = 2
Query: 74 RESKNPFYVTSSEL--STTTTERRFNAPTVYKPSPRNDL-----GAGIDWSFMYTKESEQFGIGVPQSDSKLSAAIALQSSFAATARRRHCTRREPGACANDAQRGVAGAGDSXXXXXXXXXXXXEMRRQLPSDQASLDKLLERFDHRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELDPQFL 700
RE+ NPF+ T++ + F AP VY+P +N L G D+SFMY KES+ G V S+SKLSAA+ ++ + TAR R + ++ + + A + + R +A +++ L RF+H P+ +NPLYTT+ N G + PT ATFT +R++R Q FSNSFN + +RD GL+T++ +S VH +LDPQFL
Sbjct: 12 RETNNPFFQTNNNNYGMADFNSKDFEAPPVYRPQQKNQLDEDDDGYNPDFSFMYKKESDNIGGEVQSSESKLSAALKMKQTLGETARMRAAGLNQADPTISEEHKAIVEADST-------------LARAGRKTRAEVEEHLGRFEHAPKAQNPLYTTSNNMYGNKVPTPATFTADRASRIQKFSNSFNGMVHRDQGLNTAIIKSRVHSKLDPQFL 214
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A8J2SKS3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS3_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.850e-25 Identity = 78/207 (37.68%), Postives = 110/207 (53.14%), Query Frame = 2
Query: 74 RESKNPFY-VTSSELSTT-TTERRFNAPTVYKPSPRNDLGAGIDWSFMYTKESEQFGIGVPQSDSKLSAAIALQSSFAATARRRHCTRREPGACANDAQRGVAGAGDSXXXXXXXXXXXXEMRRQLPSDQASLDKLLERFDHRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELD 688
R S NPF+ T+ ++ T E + APTV + PR L D+ F+Y K S+ G G + S LS A+ Q + A R + T P + A +A A E R PS ++++LE + H P++E+ +Y TT+N IG KP ATFT ER AR QGFSNSF V+YR+ GL+T++T+SNVH +D
Sbjct: 12 RRSDNPFFQTTTGDIGQDFTKEVEYAAPTVERAPPRRTLVDNYDFGFLYEKMSDDIGAGQHHAPSNLSRAMGAQDTPAQLTRLK--TMGAPASAAT-----IAAA---------------ESR---PSAADRVERILEIYKHAPKKEHEMYMTTSNVIGALKPNVATFTAERRARNQGFSNSFQGVKYRNQGLTTAVTKSNVHDMID 193
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A7S1UKY3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKY3_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.630e-24 Identity = 74/207 (35.75%), Postives = 115/207 (55.56%), Query Frame = 2
Query: 74 RESKNPFY-VTSSELSTTTTE--RRFNAPTVYKPSPRNDLGA-GIDWSFMYTKESEQFGIGVPQSDSKLSAAIALQSSFAATARRRHCTRREP-GACANDAQRGV--AGAGDSXXXXXXXXXXXXEMRRQLPSDQASLDKLLERFDHRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNV 673
R+S+NPF+ T+S++ ++ + R +AP V +P+ + L G D+SF+Y S + G G+ SDSKLS ++ R EP G A RG+ GD M+ Q+ ++ +++ LL + H P+ E+ LY TT+N+IGL+KP+ AT+ ER +RQQ FSNSFN + YRD GL+TS+ +S +
Sbjct: 12 RDSRNPFFHTTTSDIGSSIVKAGREVDAPAVPRPAMKQTLREQGYDFSFLYKPASAEIGKGIGMSDSKLSESM---------------RREEPKGDIAFQRGRGLNPISPGDEMTLATVDPDGLASMK-QVGKEEVNVNSLLNSYRHAPKPEHALYPTTSNDIGLKKPSKATYVLERHSRQQRFSNSFNGILYRDQGLNTSMHKSKI 202
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A7S3M5B3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5B3_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.840e-14 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 2
Query: 443 LPSDQASLDKLLERFDHRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELDPQF 697
L + + + +L + H P+ E+P YTT+ ++ G + P+ AT +R+AR Q FS SFNNV+ ++ L+TS+TRSNVH LDPQF
Sbjct: 140 LSPGKRTAENVLAVYKHEPKYEDPRYTTSTSDYGKKPPSVATLVVDRAARPQAFSRSFNNVKPQNTSLTTSITRSNVHSSLDPQF 224
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A482T2A8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2A8_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 3.660e-8 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 533 NEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELDPQF 697
+E G + P+ AT +R+ R QGFS SFNNV+ ++ L+T+LT+SNVH+ LDPQF
Sbjct: 167 SEYGKKAPSVATIVVDRAVRPQGFSKSFNNVKPKNTSLTTALTKSNVHRTLDPQF 221
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Match: A0A7S0WUE5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WUE5_9CHLO) HSP 1 Score: 53.9 bits (128), Expect = 3.610e-5 Identity = 38/96 (39.58%), Postives = 49/96 (51.04%), Query Frame = 2
Query: 428 EMRRQLPSDQASL---DKLLERFD------HRPRRENPLYTTTANEIGLRKPTGATFTFERSARQQGFSNSFNNVRYRDMGLSTSLTRSNVHKELD 688
E RR+ P D L ERF H PR+++P+Y TTANEIG + P+ + GFS +F Y+ GL T +TRS VHK LD
Sbjct: 104 EARRKGPDGFVKFGVRDALPERFADVTTRRHNPRKQHPVYETTANEIGRKPPSQLDMPDVYAGSAGGFSKTFAGP-YKARGLVTGITRSKVHKLLD 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1692.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1692.2.1 >prot_P-wetherbeei_contig1692.2.1 ID=prot_P-wetherbeei_contig1692.2.1|Name=mRNA_P-wetherbeei_contig1692.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=217bp MRQKRPPRESKNPFYVTSSELSTTTTERRFNAPTVYKPSPRNDLGAGIDWback to top mRNA from alignment at P-wetherbeei_contig1692:817..1773+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1692.2.1 ID=mRNA_P-wetherbeei_contig1692.2.1|Name=mRNA_P-wetherbeei_contig1692.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig1692:817..1773+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1692:817..1773+ >mRNA_P-wetherbeei_contig1692.2.1 ID=mRNA_P-wetherbeei_contig1692.2.1|Name=mRNA_P-wetherbeei_contig1692.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=651bp|location=Sequence derived from alignment at P-wetherbeei_contig1692:817..1773+ (Phaeothamnion wetherbeei SAG_119_79)back to top |