mRNA_P-wetherbeei_contig1691.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1691.1.1
Unique NamemRNA_P-wetherbeei_contig1691.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: D8LCZ8_ECTSI (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ8_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 7.330e-158
Identity = 224/268 (83.58%), Postives = 245/268 (91.42%), Query Frame = 1
Query:  115 FDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEM 918
             DV+KI+RR ERK+TMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTV +MLHH +AV RGA+ PL+V DMPFGSYEVSP +AL TA RFVK+G  DAVKLEGG+NRAEH+RKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQ+VDDALAVQ+AGAFA+VVECVP+PV  A+TEALEIPTIGIGAGP TSGQVLVYHDMLGMLQHPHHAQFVPRFCK YASVGEE R+GLE FR E E GVFP  +++PY+M
Sbjct:    1 MDVVKIRRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKM 268          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A7S3YF20_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF20_9EUKA)

HSP 1 Score: 403 bits (1035), Expect = 7.690e-138
Identity = 202/291 (69.42%), Postives = 242/291 (83.16%), Query Frame = 1
Query:   58 GTPPAEAESPPSTRRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPS-PKYTPYEMSQK 927
            G   A+A +  + RRK+S  ++I  +RR ER ITMVTAYDYPSA+H   AGIDI+LVGDS GMVELGYDTTQPVT+DEM+HH RAV RGAKHPL+VGD+PFGSYEV+P QA +TAYRFVK+ G D VK+EGGR  A   +KVV+GG+AVMGHVGLTPQAISVLGGFRAQGRTA+KAR+LVDDALA++DAG FA+VVECVP  VG AIT+ALEIPTIGIG+GP T+GQVLVYHDMLGM  HPH+  F P+FCK++  +GE  R+GLE F++E ESG FPS   ++PY+MS+K
Sbjct:   41 GVSAAQAATGTAGRRKMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDIVLVGDSCGMVELGYDTTQPVTIDEMMHHARAVVRGAKHPLVVGDLPFGSYEVNPEQAQQTAYRFVKEAGVDCVKMEGGRKMAPFAQKVVNGGVAVMGHVGLTPQAISVLGGFRAQGRTAIKARELVDDALALEDAGCFAVVVECVPPQVGQAITQALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKKEVESGTFPSLDSHSPYKMSKK 330          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A7S2XAE6_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2XAE6_9EUKA)

HSP 1 Score: 398 bits (1022), Expect = 1.090e-135
Identity = 201/294 (68.37%), Postives = 239/294 (81.29%), Query Frame = 1
Query:   58 GTPPAEAESPPSTRRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPK-YTPYEMSQKVKC 936
            G   A+A +  + RRK+S  ++I  +RR ER ITMVTAYDYPSA+H   AGID++LVGDS GMVELGYDTTQPVT+DEMLHH +AV RGAKHPLIVGD+PFG+YEVSP QA  TAYRFVK+ G D VK+EGGR  A    KVV+GG+AVMGH+GLTPQ ISVLGGFRAQGRTA+KAR+LVDDALA++DAG FAIV+ECVP  VG AITEALEIPTIGIG+GP T+GQVLVYHDMLGM  HPH+  F P+FCK++  +GE  R+GLE F+ E ESG FPS + ++PY+MS K + 
Sbjct:   36 GVSAAQAATGTAGRRKMSAMELIAKRRRGER-ITMVTAYDYPSALHCDLAGIDVVLVGDSCGMVELGYDTTQPVTIDEMLHHAKAVVRGAKHPLIVGDLPFGTYEVSPEQAQRTAYRFVKEAGVDCVKMEGGRKMAPFASKVVNGGVAVMGHIGLTPQHISVLGGFRAQGRTAIKARELVDDALALEDAGCFAIVIECVPPQVGEAITEALEIPTIGIGSGPGTTGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIRQGLEGFKREVESGSFPSLQDHSPYKMSNKEQA 328          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: W7TQW2_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQW2_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 2.200e-134
Identity = 202/293 (68.94%), Postives = 239/293 (81.57%), Query Frame = 1
Query:   52 APGTPPAEAESPP----STRRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEM 918
            AP   P  +  PP    ++ +K+SV D++  KR+++R I+MVTAYDYPSA+HV  AGIDI+L GDSV MVELGYDTTQPV +++MLHH +AV RG K  LIVGDMPFGSYEVS   A+  A+RF+K+G  DAVK+EGGR+RA  V K+V  GIAVMGHVGLTPQAISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFA+VVECVPAPV  AITEALEIPTIGIGAGPHT GQVLV+HDMLGM  HPHH  FVPRFCKRYA +G   R+GLE+F+++ E+G FPS  Y+PY+M
Sbjct:   40 APAGGPRASARPPLGGNASSKKMSVLDLLHKKRKNQR-ISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKM 331          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A7S2FBI3_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBI3_9STRA)

HSP 1 Score: 387 bits (993), Expect = 3.880e-132
Identity = 190/270 (70.37%), Postives = 232/270 (85.93%), Query Frame = 1
Query:  118 DVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEMSQK 927
            +++ +KRR +R I+MVTAY+YPSAV V  A ID++LVGDSVGMVELGY+TTQPVT+++MLHH +AV RG +  LIV D+PFGSYE+SPAQAL++AYR VK+GGADAVKLEGGR+RA+  R +V GGIAVMGH+GLTPQAISV+GGFRAQGRT VKAR L+DDALA+QDAG FA+V+ECVP  V   ITE+LEIPTIGIGAGPHT+GQVLVYHDMLGML HPHH QFVP+FCK+YA VG   R GL+AF+ + + G+FP+ ++TPY+MS K
Sbjct:    1 ELLAMKRRGKR-ISMVTAYNYPSAVQVDLANIDVVLVGDSVGMVELGYETTQPVTLEDMLHHAKAVKRGVERSLIVVDLPFGSYEISPAQALQSAYRCVKEGGADAVKLEGGRDRADTCRSIVKGGIAVMGHIGLTPQAISVIGGFRAQGRTGVKARALLDDALALQDAGVFALVLECVPPQVAQVITESLEIPTIGIGAGPHTTGQVLVYHDMLGMLSHPHHEQFVPKFCKKYAEVGHAIRFGLDAFKSDVDQGLFPADEFTPYKMSDK 269          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A7S0H7K8_9EUKA (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H7K8_9EUKA)

HSP 1 Score: 384 bits (987), Expect = 1.100e-130
Identity = 197/291 (67.70%), Postives = 237/291 (81.44%), Query Frame = 1
Query:   58 GTPPAEAESPPSTRRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPS-PKYTPYEMSQK 927
            G   A+A +  + RRK+S  ++I  +R+ E KITMVTAYDYPSA+H   AGIDI+LVGDS+GMVELGY+ T PVT +E+LHH +AV RGAKHPLI+ D+PFGSYEV P QA E+AY+FVK+ G DAVK+EGGR  A  V+KVVDGGIAVMGHVGLTPQ I+VLGGFRAQGRTA KAR L+DDALA++ AGAFAIV+ECVPA VG AIT ALEIPTIGIGAGP TSGQVLVYHDMLGM  HPH+  F P+FCK++  +GE  R+GLE F++E E+G FPS   ++PY+MS+K
Sbjct:   43 GVSAAQAATGIAGRRKMSALELISRRRKGE-KITMVTAYDYPSALHCDLAGIDIILVGDSLGMVELGYENTLPVTPEELLHHAKAVVRGAKHPLIIADLPFGSYEVDPKQAQESAYKFVKEAGVDAVKMEGGRRLAPTVKKVVDGGIAVMGHVGLTPQHINVLGGFRAQGRTAKKARDLLDDALALEAAGAFAIVIECVPAQVGEAITNALEIPTIGIGAGPGTSGQVLVYHDMLGMTVHPHYKAFTPKFCKKFVDLGETIREGLECFKKEVETGEFPSFSDHSPYKMSKK 332          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A4D9CXI1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXI1_9STRA)

HSP 1 Score: 382 bits (981), Expect = 1.530e-130
Identity = 190/253 (75.10%), Postives = 215/253 (84.98%), Query Frame = 1
Query:  160 MVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEM 918
            MVTAYDYPSA+HV  AGIDI+L GDSV MVELGYDTTQPV +++MLHH +AV RG K  LIVGDMPFGSYEVS   A+  A+RF+K+G  DAVK+EGGR+RA  V K+V  GIAVMGHVGLTPQAISVLGGFRAQGRTAVKAR LVDDALA+Q+AGAFA+VVECVPAPV  AITEALEIPTIGIGAGPHT GQVLVYHDMLGM  HPHH  FVPRFCKRYA +G   R+GLE+F+++ E+G FPS  Y+PY+M
Sbjct:    1 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVYHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKM 253          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A835Z145_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z145_9STRA)

HSP 1 Score: 380 bits (976), Expect = 1.650e-129
Identity = 187/267 (70.04%), Postives = 217/267 (81.27%), Query Frame = 1
Query:  121 VIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEMS 921
            V+K+ R  +RKITMVTAYDYPS+VHVC AGIDI LVGDSVGMV LGY+TTQPVTV+EMLHH RAV RGA  PL+VGDMPFGSYEVSP QAL+TAYRFVK+GG DAVKLEGGR R EH++++V+GG+AVMGHVGLTPQAISVLGGFRAQGR+ +            Q+AGAFA+V+ECVPA VG AI +ALEIP IGIGAGPHT GQVLVYHDMLG+L HPHH +  P+FCK +A V  E  KGL A+R E E+G FP   ++PY M+
Sbjct:    3 VLKLAREKKRKITMVTAYDYPSSVHVCEAGIDIALVGDSVGMVTLGYETTQPVTVEEMLHHCRAVKRGAAGPLLVGDMPFGSYEVSPEQALQTAYRFVKEGGVDAVKLEGGRTRTEHIKRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRSVI------------QEAGAFAVVLECVPAVVGRAIADALEIPVIGIGAGPHTDGQVLVYHDMLGILSHPHHQRMAPKFCKVFADVQTEVMKGLHAYRREVEAGAFPGAAHSPYAMT 257          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: K3W4X2_GLOUD (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W4X2_GLOUD)

HSP 1 Score: 377 bits (969), Expect = 1.100e-127
Identity = 187/275 (68.00%), Postives = 229/275 (83.27%), Query Frame = 1
Query:   97 RRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEMS 921
            RRK++  D+  +KR+ ++ ITMVTAYDYPSAVHV  AG DILL+GDS+GMVELG DTT PVT+D+M+HH +AV RGA+ PLI+ DMPFGS E  P +AL+ A R +K+GGAD VK+EGGR RA+ ++ +VDGGIAVMGHVGL PQ ISVLGGFRAQGRTAV+A Q+++DALAVQ+AGAFA+V+ECVP+PV   +TE L +PTIGIGAGP TSGQVLV+HD+LGMLQHPHHAQ VP+FCKRYA VGE  R GLE +RE+ E+  FPS +Y PY+MS
Sbjct:   55 RRKVTTLDLGILKRK-KKPITMVTAYDYPSAVHVDLAGFDILLIGDSLGMVELGMDTTIPVTMDDMIHHTQAVKRGAERPLIIADMPFGSCEGDPYEALKNAQRLLKEGGADCVKIEGGRERAKTIKLIVDGGIAVMGHVGLRPQHISVLGGFRAQGRTAVQAEQIIEDALAVQEAGAFAVVLECVPSPVAKQVTELLRVPTIGIGAGPDTSGQVLVFHDLLGMLQHPHHAQHVPKFCKRYADVGERIRIGLEEYREDVENRRFPSEEYAPYKMS 328          
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Match: A0A5D6YGP1_9STRA (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGP1_9STRA)

HSP 1 Score: 374 bits (959), Expect = 3.150e-126
Identity = 185/277 (66.79%), Postives = 227/277 (81.95%), Query Frame = 1
Query:   97 RRKLSVFDVIKIKRRDERKITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLHHLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEGGRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVDDALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVYHDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPKYTPYEMSQK 927
            RRK++  D+  +KR++ + ITMVTAYDYPSAVHV  AG D+LLVGDS+GMVELG DTT PVT++E++HH +A  RGA  PLIV DMPFG+ E  P +AL+ A R +K+GGAD VK+EGGR R + +R +V+GGIAVMGHVGL PQ ISVLGGFRAQGRTA +A +++ DALAVQ+AGAFA+V+ECVP+PV   +TE LEIPTIGIGAGP TSGQVLVYHD+LGMLQHPHHAQFVP+FCKRYA VGE  R GLE +RE+ E+  FP+  Y PY+MS++
Sbjct:   52 RRKVTTLDIGILKRKN-KPITMVTAYDYPSAVHVDLAGFDMLLVGDSLGMVELGMDTTIPVTLEEIIHHTKAARRGASRPLIVADMPFGTCEGDPYEALKNAQRMLKEGGADCVKIEGGRGRTKTIRTIVEGGIAVMGHVGLLPQHISVLGGFRAQGRTAAQAEEIIKDALAVQEAGAFAVVLECVPSPVAKQVTELLEIPTIGIGAGPETSGQVLVYHDLLGMLQHPHHAQFVPKFCKRYADVGERIRIGLEEYREDVENRRFPNEDYAPYKMSKE 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1691.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCZ8_ECTSI7.330e-15883.583-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S3YF20_9EUKA7.690e-13869.423-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S2XAE6_9EUKA1.090e-13568.373-methyl-2-oxobutanoate hydroxymethyltransferase (... [more]
W7TQW2_9STRA2.200e-13468.943-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S2FBI3_9STRA3.880e-13270.373-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A7S0H7K8_9EUKA1.100e-13067.703-methyl-2-oxobutanoate hydroxymethyltransferase (... [more]
A0A4D9CXI1_9STRA1.530e-13075.103-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A835Z145_9STRA1.650e-12970.043-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
K3W4X2_GLOUD1.100e-12768.003-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]
A0A5D6YGP1_9STRA3.150e-12666.793-methyl-2-oxobutanoate hydroxymethyltransferase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1691contigP-wetherbeei_contig1691:79..2441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCZ8
Preferred namePANB
PFAMsPantoate_transf
Model size939
Max annot lvl2759|Eukaryota
KEGG rclassRC00022,RC00200
KEGG koko:K00606
KEGG ReactionR01226
KEGG Pathwayko00770,ko01100,ko01110,map00770,map01100,map01110
KEGG ModuleM00119
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.2e-158
EggNOG OGsCOG0413@1|root,KOG2949@2759|Eukaryota
Ec32 ortholog descriptionPyruvate/Phosphoenolpyruvate kinase-like domain
Ec32 orthologEc-01_001700.1
EC2.1.2.11
Description3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Cds size939
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1691.1.1prot_P-wetherbeei_contig1691.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1691 79..2441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.5823605-CDS-P-wetherbeei_contig1691:78..1801683186101.5823605-CDS-P-wetherbeei_contig1691:78..180Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 79..180 -
1683186101.5940995-CDS-P-wetherbeei_contig1691:437..5361683186101.5940995-CDS-P-wetherbeei_contig1691:437..536Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 438..536 -
1683186101.6046274-CDS-P-wetherbeei_contig1691:774..8871683186101.6046274-CDS-P-wetherbeei_contig1691:774..887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 775..887 -
1683186101.613403-CDS-P-wetherbeei_contig1691:1171..12391683186101.613403-CDS-P-wetherbeei_contig1691:1171..1239Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 1172..1239 -
1683186101.6223114-CDS-P-wetherbeei_contig1691:1410..15501683186101.6223114-CDS-P-wetherbeei_contig1691:1410..1550Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 1411..1550 -
1683186101.6305928-CDS-P-wetherbeei_contig1691:1720..18911683186101.6305928-CDS-P-wetherbeei_contig1691:1720..1891Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 1721..1891 -
1683186101.638952-CDS-P-wetherbeei_contig1691:2195..24411683186101.638952-CDS-P-wetherbeei_contig1691:2195..2441Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1691 2196..2441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1691.1.1

>prot_P-wetherbeei_contig1691.1.1 ID=prot_P-wetherbeei_contig1691.1.1|Name=mRNA_P-wetherbeei_contig1691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MKLRPRALSFSSSDAGTAPGTPPAEAESPPSTRRKLSVFDVIKIKRRDER
KITMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVDEMLH
HLRAVCRGAKHPLIVGDMPFGSYEVSPAQALETAYRFVKDGGADAVKLEG
GRNRAEHVRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQLVD
DALAVQDAGAFAIVVECVPAPVGAAITEALEIPTIGIGAGPHTSGQVLVY
HDMLGMLQHPHHAQFVPRFCKRYASVGEEARKGLEAFREECESGVFPSPK
YTPYEMSQKVKC*
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mRNA from alignment at P-wetherbeei_contig1691:79..2441-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1691.1.1 ID=mRNA_P-wetherbeei_contig1691.1.1|Name=mRNA_P-wetherbeei_contig1691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2363bp|location=Sequence derived from alignment at P-wetherbeei_contig1691:79..2441- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTGCGGCCCCGCGCGTTGTCCTTTTCGTCTTCTGACGCGGGAAC GGCTCCCGGTACTCCTCCTGCGGAAGCAGAATCGCCTCCTTCGACGCGGC GCAAGCTCTCCGTCTTTGATGTGATCAAGATTAAACGTCGCGATGAACGC AAAATCACAATGGTGACGGCGTACGACTACCCGTCAGCTGTGCACGTTTG CCGCGCCGGTATCGACATCCTCCTGGTCGGCGACTCGGTCGGCATGGTAC GAATTTTCTCCACTGGTCGCTCTTCTGAGCAATTCTTCACCTTTCGCGAT GGTGGTGGCCTGGTTCTTCTTATTCTCTTCGGTACTCTTCAGGCCTTGGC ACTCCGATCCGATGCCAGTAGCAATAAATACACTTAAAACACTTTGGTGA TGGTGACCTTCTCGATAGCTCTCCGAAGACCTGCCATTGAAAAGGTGCAT GGACAAAGAGAGAAATTCTTTCCCATGTCTTGTTGAGCTTATACACACAA AACTCCCTCTTAGGTAGCAACGCGCCGTTCTGCTTTTCTCTGTCCCGCAG GTGGAGCTCGGTTACGACACGACGCAGCCCGTGACGGTCGACGAGATGCT GCACCACCTCCGCGCCGTCTGCCGGGGCGCGAAGCATCCGCTCATCGTCG GAGACATGCCCTTCGGCAGCTACGAAGTCTCCCCGGCGCAAGCCCTCGAG ACGGCCTACCGCTTCGTCAAGGTAAGCGGAACTGCGGTGCTGCGCGGGGG AGCATCGAATTCAATCGCGACATTTAAAACGGCAAAGGCATTGTGCAGCT TCCCAAATTCCGCTCTTGAAACCCAGTTGAAATTGAACCTCGGCCGAAAA CTTTTCATTGCTGCTTTCCCTCTTCATTTTCCCGCATTAAGGATGGCGGA GCGGACGCCGTCAAGCTGGAAGGCGGACGAAACCGCGCTGAGCACGTGCG GAAGGTGGTCGACGGCGGCATCGCTGTGATGGGCCACGTCGGCCTCACGC CACAAGCCATCAGCGTCCTCGGCGGCTTCAGGTGGGATTGCGATGGCGGC GCGGTTTGAAGAATAAACCAGATGGGGAGGCTGCAATGGAGCTTGAACAG GAAGCATCTGACCGGGGCGATTTTCCATGCCAGGTTACTGTGTTACATGG CCGCTTTCCGATGATTAGTTGCCGTCCTCTCCATTGCCTACCGCCGCCGC AGGGCACAAGGACGAACGGCGGTGAAAGCACGGCAGCTGGTTGACGATGC GTTGGCCGTGCAAGATGCAGGTAGGAGACAACAGTTGCTGCACTTGTGGT TTCAGAATGGTGCGGGCCTTGTGGAGTGGCTTGTTGCTCTTTCATTAAAG GAAGGGCCGCAGTCCGTCAAGGGCGTCTTGAACAGGCTCCTGTGCGCGGG CTTTAATTGTTGCCGCTGGGCTTAGGTGTTTGCTTGGCTCGTCTTGTCTT TCTCTTTCTTTTTCCTTCCTCGTTCGGTTTGCTTTTTGGGGAAACTGGTT TCTGTGTAGTTAGCCGCGCAATAGCGCGCGTTCGCTTTATCTCCCTTCCT GCAGGCGCGTTTGCCATCGTGGTGGAATGCGTGCCGGCCCCGGTCGGCGC TGCCATCACGGAGGCGCTGGAGATCCCCACCATCGGCATCGGGGCCGGGC CGCACACCAGCGGGCAGGTACGTACGGCGCGCCAGAAGGGTTTCCACTTC TTCCGCATCGTGGAGATGTAACTGCGCATTTGGCTCGCATACAACTGCTG TGGCCTGGCAAAAAAGCTTGCAGGTGGAAAGGCTTTGGCGCCCGTCTGCC TTTGACTGTATGTGGAGGTCGATTTTGCCCAAACTGTTCCTCTTAACATG CATCCGCCTGGCGGTCATCGCTGCCGCTGCCGCACTGCCGCACGAAAACA CTCAGGTGCTGGTTTACCATGACATGCTGGGGATGCTGCAGCACCCGCAC CACGCGCAGTTCGTGCCCCGATTCTGCAAGCGATACGCCTCTGTCGGCGA GGAGGTGCGCTTCATGGAGCCGGCGCCGCGCTTCGCCGCTGCCCCGCGCG CACGCCTCTGATCCTTCTTTGCACGGGCTGCCGCTGGCTGAATCCGCATT ATATGGAAACTGACATAGCAGCTGGCGCCGCCTCCGCGGCTGCCACGCCG CTCCTGCTACTGCCGCCCCCATTGCCGCCATTGTCGCCATCATAGCTGCT GCCGCGGCCATCATTCTCGCCGCTTGCTGTCAATTCTGGGCCATGGCCGG CACTAATGCAGGCGCGCAAGGGTCTCGAGGCGTTTCGGGAGGAATGCGAG TCCGGCGTCTTCCCATCGCCAAAATATACTCCGTATGAAATGAGCCAAAA GGTGAAGTGTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1691:79..2441-

>mRNA_P-wetherbeei_contig1691.1.1 ID=mRNA_P-wetherbeei_contig1691.1.1|Name=mRNA_P-wetherbeei_contig1691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig1691:79..2441- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTGCGGCCCCGCGCGTTGTCCTTTTCGTCTTCTGACGCGGGAAC
GGCTCCCGGTACTCCTCCTGCGGAAGCAGAATCGCCTCCTTCGACGCGGC
GCAAGCTCTCCGTCTTTGATGTGATCAAGATTAAACGTCGCGATGAACGC
AAAATCACAATGGTGACGGCGTACGACTACCCGTCAGCTGTGCACGTTTG
CCGCGCCGGTATCGACATCCTCCTGGTCGGCGACTCGGTCGGCATGGTGG
AGCTCGGTTACGACACGACGCAGCCCGTGACGGTCGACGAGATGCTGCAC
CACCTCCGCGCCGTCTGCCGGGGCGCGAAGCATCCGCTCATCGTCGGAGA
CATGCCCTTCGGCAGCTACGAAGTCTCCCCGGCGCAAGCCCTCGAGACGG
CCTACCGCTTCGTCAAGGATGGCGGAGCGGACGCCGTCAAGCTGGAAGGC
GGACGAAACCGCGCTGAGCACGTGCGGAAGGTGGTCGACGGCGGCATCGC
TGTGATGGGCCACGTCGGCCTCACGCCACAAGCCATCAGCGTCCTCGGCG
GCTTCAGGGCACAAGGACGAACGGCGGTGAAAGCACGGCAGCTGGTTGAC
GATGCGTTGGCCGTGCAAGATGCAGGCGCGTTTGCCATCGTGGTGGAATG
CGTGCCGGCCCCGGTCGGCGCTGCCATCACGGAGGCGCTGGAGATCCCCA
CCATCGGCATCGGGGCCGGGCCGCACACCAGCGGGCAGGTGCTGGTTTAC
CATGACATGCTGGGGATGCTGCAGCACCCGCACCACGCGCAGTTCGTGCC
CCGATTCTGCAAGCGATACGCCTCTGTCGGCGAGGAGGCGCGCAAGGGTC
TCGAGGCGTTTCGGGAGGAATGCGAGTCCGGCGTCTTCCCATCGCCAAAA
TATACTCCGTATGAAATGAGCCAAAAGGTGAAGTGTTAA
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