mRNA_P-wetherbeei_contig1690.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A836CEG4_9STRA (Tricarboxylate carrier-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG4_9STRA) HSP 1 Score: 440 bits (1131), Expect = 1.520e-145 Identity = 221/338 (65.38%), Postives = 273/338 (80.77%), Query Frame = 2
Query: 14 AAMLAELEAAQKTPPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
A + +L+AA+ TPPFSLEKPRY+L++F+GR+LHFYSVNDPRTLL + +++ + +LE Y+ GTLP G+ D+QLWAARR ES +HPDT +PI P RFSAFVP+NM IVTA LAPAVI SF AT +HLVNQ+YNAAIN+ANRNASNP T L++GY GAV TS+ IG+ AT +T+RA+ P AG IR+TLPFLATA AG AN+ LMRR+ELV+GVD++D EG RGKS IAG TGIAKCAAAR++WN+PIM+ PPL+M LERTGPL RNPRLKMA E+ V+T+CL+GAVSP+LA FPQRD + A LEP + LTDSAG+P+T L+YNKGL
Sbjct: 246 ADLSKQLKAAEATPPFSLEKPRYDLDSFVGRSLHFYSVNDPRTLLCSSDDLKASMALLESYKAGTLPAGIGDQQLWAARRLIESAIHPDTKQPIPPYLRFSAFVPINMFIVTATLAPAVIGSFAATGCIHLVNQTYNAAINYANRNASNPVSTQRLMEGYAGAVATSLTIGLSATALTRRASRWTPLAAGLIRSTLPFLATAGAGFANVALMRRNELVEGVDMFDAEGNMRGKSKIAGQTGIAKCAAARLIWNVPIMMFPPLLMTHLERTGPLRRNPRLKMAVEVGVITSCLLGAVSPSLAVFPQRDALRAETLEPEFRGLTDSAGRPVTTLYYNKGL 583
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: D7FUC2_ECTSI (Similar to sideroflexin 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUC2_ECTSI) HSP 1 Score: 405 bits (1042), Expect = 1.470e-135 Identity = 211/333 (63.36%), Postives = 253/333 (75.98%), Query Frame = 2
Query: 41 AQKTPPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGA----IRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
AQ+ PPF E PRY++ TF+GR LHFYSVNDPRTLL T E+ A K+L+ G P+G TD LW ARR ES LHPDTGEPIFPLFRFSAFVPVNM IVTA + PAVISSFPATA +H +NQ+YNAAIN+ANRNASNP P A LV+GY GAV TS+ IGM +T +TKR A G G IR+TLPFLA A AG++N+ LMRR+EL GVDV+D EGK+ GKS AG G+ KCAAARV+WN+P+M+ PP+IM RLER ++ +PRL+MA E AVVT+CL+ AVSPALA FPQRD +E LEP+ L+DSAG+P+T +WYNKGL
Sbjct: 12 AQEVPPFRREGPRYDMSTFVGRMLHFYSVNDPRTLLFTDEDTKSAEKLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFLNQTYNAAINYANRNASNPVPRARLVEGYAGAVITSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPMIMSRLERLRLVSSSPRLRMACETAVVTSCLLAAVSPALAFFPQRDSLEVDTLEPKFSGLSDSAGKPVTRVWYNKGL 344
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: F2UI50_SALR5 (Sideroflexin 5 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI50_SALR5) HSP 1 Score: 258 bits (659), Expect = 3.690e-78 Identity = 146/334 (43.71%), Postives = 208/334 (62.28%), Query Frame = 2
Query: 44 QKTPPFSLEKP-RYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKR-AANMG----PGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
+ PPFSL P R++L T+LGR HFY+ DP TLL +K +I EA ++E +++GT+ VT+ QLW AR+ +S LHPDTGE IFPLFRFSAF P N+ I +L P F TA +NQ+YN +N+ANRNAS+ T+ L+ Y AVT+S G+ +G +++ AA G P + A RA +P+LA AG N+ +R++E +GV VY G++ GKS +AG + KC+ R LW IPI PPLIM +++ + +NPRL+ E+ V+ A + V PALAA+PQRD + +E R +L D +G+PI +++NKGL
Sbjct: 6 ESMPPFSLAAPSRFDLSTYLGRVKHFYNTTDPSTLLYSKSKIMEAKALMESFKHGTVDPSVTNTQLWKARKLCDSALHPDTGELIFPLFRFSAFAPANIPIAAMLLYPTANPYFIITA--QFINQTYNVCVNYANRNASSNMSTSTLLTAYGAAVTSSCGLALGFGKISRMLAARAGGSPSPLMVAAQRAVVPYLAVVGAGIVNLLCIRQTEFSEGVTVYSEGGEDLGKSVVAGRDALKKCSIVRALWCIPICC-PPLIMSLVDKVKVIRQNPRLRFIAELVVIGASVGFGVPPALAAYPQRDSLPVTAIESRFHNLIDESGKPIDRVYFNKGL 336
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A0D2UFK2_CAPO3 (Sidoreflexin n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFK2_CAPO3) HSP 1 Score: 251 bits (641), Expect = 1.590e-75 Identity = 142/336 (42.26%), Postives = 202/336 (60.12%), Query Frame = 2
Query: 38 AAQKTPPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKG----VTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLA--PAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
++ + P F+L+KPRY+ F GR HF+ + DP LL + ++ E+ +L ++ G + G VTD Q+W ARR +E+ LHPDT EPI +FR SAFVP N+ I+ ML P V++ T +NQ++NA N++NRNA+ P TA + Y A S+G +G + KRA N+ P V G +R +PF+A A+AG AN+ LMRR E G+DV D EG G+S AG + + A RVL +PI+++PP+IM L RT L NPR++MA E+ V+ + GA+ A+A FPQ VE +KLE R + G PIT L+YNKG+
Sbjct: 2 SSSEVPKFTLDKPRYDQSAFSGRVRHFFDLVDPMLLLTSDAKLKESVDLLAAFKAGKINPGQPGQVTDAQMWEARRIKEAILHPDTNEPIPAVFRMSAFVPANVPIIAGMLMSPPTVLN----TVMWQWINQTFNAGFNYSNRNANAPQSTAEIATAYGAASAISVGTAVGLGELVKRATNLPPAVRGVVRTVVPFVAVASAGVANMYLMRRGEAETGIDVRDSEGNLVGRSQEAGKICLKQVAVTRVLLPVPILILPPVIMSGLNRTAFLKSNPRVRMAVEVGVIAGAIWGALPLAIATFPQVMPVETSKLETRFHQMRTPKGDPITTLYYNKGV 333
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A397THI9_9GLOM (Sidoreflexin n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397THI9_9GLOM) HSP 1 Score: 244 bits (624), Expect = 5.130e-73 Identity = 133/321 (41.43%), Postives = 194/321 (60.44%), Query Frame = 2
Query: 65 LEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
L KPRY+ T+ GR HF ++ DPRTL + + ++EA ++ Y +G + + V E+LW A++ +ST+HPDTGEPIF FR S+FVP N+ +V ML P S + NQS N AIN++N N + Y+ AVTTS G+ +G T R + V G + +PF+A A+AG+ N+ LMR EL DG+D+YD EG N GKS AG + + + A +RVL P++ VPPL++ +LE+T L +NPRL M ++T L+ A+ A+AAFPQ+ V+ KLE + +L + G+PI ++YNKGL
Sbjct: 15 LSKPRYDQSTYWGRVKHFVNITDPRTLFVPRNGLEEAKALINDYNSGKI-RDVNPEKLWNAKKIVDSTVHPDTGEPIFLPFRMSSFVPTNLIVVAGMLTPN--PSIGSIIFWQWTNQSINVAINYSNANKTTEMSLKETAIAYISAVTTSCGLAVGLTQAVPRLTFLKSSVRGILARLVPFIAVASAGTVNVYLMRMKELRDGIDIYDEEGNNLGKSKKAGASAVGQVAISRVLTTTPVLTVPPLVLSQLEKTNLLKKNPRLSMPFNFGIITITLMTALPLAIAAFPQKAVVDPMKLEQQFWNLKNKNGEPIKRVYYNKGL 332
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A2C9JDX3_BIOGL (Sidoreflexin n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JDX3_BIOGL) HSP 1 Score: 241 bits (615), Expect = 9.810e-72 Identity = 138/325 (42.46%), Postives = 188/325 (57.85%), Query Frame = 2
Query: 53 PPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
PPF L K R++ TF GR HF V DPRTLL E+++A K+LE Y+NG LP GVTDEQLW A++ +++ +HPDTGE IF FR S FVP IV +L P S +NQS+NA +N+ANRNA+ PTP + GY GAVTT++ I +G + + KRA I+ +PF A A A + N+ LMR SEL +G++V D E K G S +A + + A R+ PI ++PP++M LE+ L RNP+L + V T A+ A+A FPQ ++ +KLEP +Q T L+YNKGL
Sbjct: 11 PPFQLNKSRFDQSTFSGRLRHFLDVIDPRTLLTPNSELEKAVKLLEDYKNGNLPSGVTDEQLWKAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSFIVVGLLLPN--PSMKQIIFWQWLNQSHNACVNYANRNATKPTPIKRFILGYTGAVTTAVSIAVGLSTLIKRANRFSTTTRMLIQRFVPFPAVATASTCNVLLMRNSELYEGIEVVDKENKVVGTSKVAAKKALGETALTRMFLPAPIFIIPPIVMSILEKRKFLIRNPKLHLPINAVVCTLAFGFALPVAIALFPQYSKIPKSKLEPEIQEATQEE-----ILYYNKGL 328
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A8K0ERQ1_BRALA (SFXN5 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0ERQ1_BRALA) HSP 1 Score: 241 bits (615), Expect = 1.040e-71 Identity = 138/325 (42.46%), Postives = 195/325 (60.00%), Query Frame = 2
Query: 53 PPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
P F L KPR++ TF GR HF V DPRTL TKE + +AG++LE Y+NG LP GVT++QLW A++ + + LHPDTGE I FR S FVP IV +L P + T +NQ++NA +N++NRNA+ PTP + VQGYVGAVT+++GI +G + K+A P ++ +PF A A A N+ LMR +EL++G++V D EG G S IA + + A R +PI+++PPL+M +ERT L PR+ + V TA A+ A+A FPQ + +KLEP +Q +A Q ++ + YNKGL
Sbjct: 13 PTFQLGKPRFDQSTFFGRYRHFLDVIDPRTLFTTKEGLAQAGQLLEDYKNGNLPDGVTNKQLWEAQKIKTAILHPDTGEKILMPFRMSGFVPFGTPIVVGLLLPD--QTMVTTIFWQWLNQTHNACVNYSNRNATKPTPVSRFVQGYVGAVTSAVGIAVGLNGLVKKARGFSPTTRMVVQRFIPFPAVATANVFNLILMRNNELLEGIEVTDKEGHLVGSSKIAAKHALFETAVTRAFLPVPILLLPPLVMSMVERTAWLLARPRMVIPMHALVCTAAFGFALPIAIALFPQYSEISTSKLEPEIQ----AATQELSVI-YNKGL 330
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A0L0G865_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G865_9EUKA) HSP 1 Score: 236 bits (601), Expect = 4.540e-71 Identity = 130/225 (57.78%), Postives = 159/225 (70.67%), Query Frame = 2
Query: 353 MLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
ML+P VI+S T A H NQSYNAA+N+ NRNAS P P +LL QGYVGAV S+ IG+ AT +T +AA +GPG A AIRATLPFLA A +G NIGLMRRSEL GV V+DHEG+ RG+S A G+ +CAAARVLWNIPI V P LIM RLE+ L NPR++MA E+ V+ CL V PALAAFPQ + + A +E + Q+L DS GQ + + +NKGL
Sbjct: 1 MLSPVVIASPVLTIAAHWTNQSYNAAVNYCNRNASQPVPASLLAQGYVGAVGASVSIGLAATALTTKAAKLGPGAALAIRATLPFLACAVSGVLNIGLMRRSELETGVTVFDHEGEARGQSIKAAEKGLKECAAARVLWNIPITVFPALIMSRLEKKTFLVSNPRVRMAVEMGVIGVCLFLGVVPALAAFPQIESMNADDMEEQFQNLKDSNGQKVEKFVFNKGL 225
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: K1RJ31_CRAGI (Sidoreflexin n=3 Tax=Crassostrea TaxID=6564 RepID=K1RJ31_CRAGI) HSP 1 Score: 238 bits (608), Expect = 9.180e-71 Identity = 135/325 (41.54%), Postives = 192/325 (59.08%), Query Frame = 2
Query: 53 PPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
PPF L K RY+ TF GR HF+ V DPRTL ++E++ K+L+ + G LP VT++ LW A++ +++ +HPDTGE IF FR S FVP +V +L P + +T +NQS+NA +N+ANRNA++PTP + + GY GAV+T++ I +G + ++A P I+ +PF A A A + N+ LMR SEL G++V DH G GKS +A + + A R+ PI+V+PP+IM LE+T R PR+ + AVVT C A+ A+A FPQ +V+ A LEP +Q LT T L YNKGL
Sbjct: 6 PPFRLGKSRYDQSTFDGRLRHFFDVIDPRTLFTSEEKLKSCVKLLDDFSKGHLPPTVTNKDLWEAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSPMVVGLLLPN--QTIASTIFWQWINQSHNACVNYANRNATSPTPMSRFLLGYTGAVSTAVSIAVGLNLLIQKANKFSPATKVLIQRFVPFPAVACASTCNLLLMRNSELSTGIEVEDHNGNVIGKSKVAAKKALMETAITRMFLPAPILVIPPIIMSLLEKTAFFKRYPRVHLPVHAAVVTVCFGLALPVAIAIFPQYSKVDTASLEPEIQKLTKD-----TTLIYNKGL 323
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Match: A0A6P5AMK0_BRABE (Sidoreflexin n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AMK0_BRABE) HSP 1 Score: 238 bits (608), Expect = 1.130e-70 Identity = 139/325 (42.77%), Postives = 192/325 (59.08%), Query Frame = 2
Query: 53 PPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDEAGKVLERYRNGTLPKGVTDEQLWAARRTRESTLHPDTGEPIFPLFRFSAFVPVNMGIVTAMLAPAVISSFPATAAVHLVNQSYNAAINFANRNASNPTPTALLVQGYVGAVTTSIGIGMGATYMTKRAANMGPGVAGAIRATLPFLATAAAGSANIGLMRRSELVDGVDVYDHEGKNRGKSAIAGTTGIAKCAAARVLWNIPIMVVPPLIMMRLERTGPLARNPRLKMATEIAVVTACLIGAVSPALAAFPQRDRVEAAKLEPRLQHLTDSAGQPITELWYNKGL 1027
P F L KPR++ TF GR HF V DPRTL TK + EA ++LE YRNG LP+GV+++QLW A++ + + LHPDTGE IF FR S FVP IV ML P + T +NQ++NA +N+ANRNA+ PTP + VQGY+GAVT+++GI +G + K+A P ++ +PF A A A N+ LMR +E+ +G+DV D EG G S A + + A +RV+ + +PP IM+ L+RT L PR+ M V TA A+ A+A FPQ + +KLEP +Q +A Q +T + YNKGL
Sbjct: 13 PTFQLGKPRFDQSTFWGRYRHFLDVIDPRTLFTTKAGLSEASQLLEDYRNGNLPEGVSNKQLWEAQKIKTAILHPDTGEKIFMPFRMSGFVPFGTPIVVGMLLPN--QTMATTIFWQWINQTHNACVNYANRNATKPTPVSRFVQGYLGAVTSAVGIAVGLNVLVKKARGFSPTTRMVVQRFIPFPAVATANVFNLVLMRNNEMREGIDVTDKEGHLVGTSKTAAKHALFETAVSRVVITALVTGIPPAIMLPLQRTAWLLARPRMVMPMHAVVCTAAFGFALPIAIALFPQYSEISTSKLEPEIQ----AATQELTVI-YNKGL 330 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1690.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1690.3.1 >prot_P-wetherbeei_contig1690.3.1 ID=prot_P-wetherbeei_contig1690.3.1|Name=mRNA_P-wetherbeei_contig1690.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp MLAELEAAQKTPPFSLEKPRYNLETFLGRTLHFYSVNDPRTLLITKEEIDback to top mRNA from alignment at P-wetherbeei_contig1690:2178..3797+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1690.3.1 ID=mRNA_P-wetherbeei_contig1690.3.1|Name=mRNA_P-wetherbeei_contig1690.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1620bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:2178..3797+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1690:2178..3797+ >mRNA_P-wetherbeei_contig1690.3.1 ID=mRNA_P-wetherbeei_contig1690.3.1|Name=mRNA_P-wetherbeei_contig1690.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:2178..3797+ (Phaeothamnion wetherbeei SAG_119_79)back to top |